Package: afni-atlases Source: afni-data Version: 0.20090604-1 Architecture: all Maintainer: Michael Hanke Installed-Size: 8112 Homepage: http://afni.nimh.nih.gov Priority: optional Section: non-free/science Filename: pool/non-free/a/afni-data/afni-atlases_0.20090604-1_all.deb Size: 7918182 SHA256: 95ca248dea6ebb03be159224387486ce1303d2de22263100135120bb439f7670 SHA1: 307335596f6c543fb993780e13a4a864947d1964 MD5sum: 49ab73017c6b921cfd51bdd384692ab5 Description: standard space brain atlases for AFNI Contains: . * Talairach Daemon database Package: fsl Version: 4.1.6-4~sid.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 80 Depends: fsl-4.1 (>= 4.1.6-4~) Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl_4.1.6-4~sid.nd1_all.deb Size: 17712 SHA256: e8975b84b32990c05d9532a32b0cd4c124cd1da482eb5c87e0123fe395b2d463 SHA1: a1c9ebda2539629bf09b971837ebec85c7a302d5 MD5sum: e6bb9adb1ff47dc3be1e1638a15dca7d Description: Metapackage for the latest version of FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. Package: fsl-4.1 Source: fsl Version: 4.1.6-4~sid.nd1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 27620 Depends: libc6 (>= 2.7), libgcc1 (>= 1:4.1.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libnewmat10ldbl, libnifti2, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.4.0), zlib1g (>= 1:1.1.4), mozilla-firefox | www-browser, tcsh | c-shell, tk8.4 (>= 8.4.7), tcl8.4 (>= 8.4.7), fslview, bc, dc Recommends: fsl-doc-4.1 (= 4.1.6-4~sid.nd1), fsl-atlases Suggests: fsl-feeds, octave3.2 (>= 3.2.4), dicomnifti, fsl-possum-data, fsl-first-data, gridengine-client Conflicts: fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl-4.1_4.1.6-4~sid.nd1_i386.deb Size: 10253780 SHA256: 5d7ea19e8565c447fbe7e9e36356713dfa7379bddbb114af37e938a1de7f62c3 SHA1: 243b06c869eb0cd1d82c1965d2419e355b06c8c0 MD5sum: 5776cbb7dcd3cb54fe15a5d98025914d Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-atlases Source: fsldata Version: 4.1.6-1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 88464 Replaces: fsl-data Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-atlases_4.1.6-1_all.deb Size: 84657708 SHA256: 5e0eff70983aab42774b9546d2cef42a426d0f8ad9e4e196262e641af1e32d71 SHA1: 82207b3dcbe10cd970eec3d76aaf70254a55b0a1 MD5sum: 88b8ed19d2766c7c98a945557f2be690 Description: MNI152 standard space brain atlases This package is part of FSL. Package: fsl-doc-4.1 Source: fsl Version: 4.1.6-4~sid.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18360 Depends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-4.1_4.1.6-4~sid.nd1_all.deb Size: 11173148 SHA256: 9a5d2af5b8f741d4d11edcfa8c5f3f3350bef8cc0ed3aa679e0cc75b9120d1b6 SHA1: 858ea73b5690b2a43b5bfc6116371e4f96e9a7e7 MD5sum: 5436cf4ea912725df90e3b8c8cd23bee Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: fsl-feeds Version: 4.1.4-1 Architecture: all Maintainer: Michael Hanke Installed-Size: 277120 Depends: fsl (>= 4), dc, tcl8.4 | tclsh, debianutils (>= 1.7), fsl-atlases (>= 4), fsl-first-data (>= 4) Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl-feeds/fsl-feeds_4.1.4-1_all.deb Size: 278136340 SHA256: b5640764ac59aba9e305df693b1eaa7a0570da42561b699035aa40de4183d0e6 SHA1: 71dcb2dbc821bac8b7dbfb697aaa624431c90dcc MD5sum: 7d084237697782a57970d7214dc4bae8 Description: FSL Evaluation and Example Data Suite FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the 'fsl-selftest' tool, that can be used to test whether FSL is working properly. Additionally the included example data might be useful when doing the first steps with FSL. . The datasets include both example input and example output data. Package: fsl-first-data Source: fsldata Version: 4.1.6-1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1132740 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-first-data_4.1.6-1_all.deb Size: 1076159770 SHA256: df7ca25a20306ac5eb4c93e4cedcdad869d53a34fdc70226a182cb77ed9a733c SHA1: c73e3b7247b14bcf9432f539f9f651597a728b29 MD5sum: 0402f29344d98564e15741d397d5f487 Description: model data for FIRST subcortical brain segmentation This package is part of FSL. Package: fsl-possum-data Source: fsldata Version: 4.1.6-1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 41284 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-possum-data_4.1.6-1_all.deb Size: 41622336 SHA256: 9f498bad65d762f5470846e7e4bcd8fcbea8a0b7bc7f8d9caa1aa104addc0798 SHA1: 0d94830a5042714b4d06bc6d48684eb3a95400ce MD5sum: 2e0b4273b181ad144ccb6409c366beec Description: sequence templates for the POSSUM MRI-simulator This package is part of FSL. Package: mipav Version: 5.0.0.20100907-1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 116 Pre-Depends: debconf (>= 0.5) | debconf-2.0 Depends: openjdk-6-jre | java6-runtime, libjogl-java, libjava3d-java, wget Homepage: http://mipav.cit.nih.gov/ Priority: extra Section: non-free/science Filename: pool/non-free/m/mipav/mipav_5.0.0.20100907-1_all.deb Size: 15132 SHA256: 343cd81a0d719f8c9930d05865d12a1ab1308ef9c8164b9c822df58b22ba80a6 SHA1: 35beef6aaecd00b1791b1c8e3d12fa2247583bf8 MD5sum: 19292991abc75d5251e24ff785cf1fd8 Description: quantitative analysis and visualization of medical images The MIPAV (Medical Image Processing, Analysis, and Visualization) application enables quantitative analysis and visualization of medical images of numerous modalities such as PET, MRI, CT, or microscopy. Using MIPAV's standard user-interface and analysis tools, researchers at remote sites can easily share research data and analyses, thereby enhancing their ability to research, diagnose, monitor, and treat medical disorders. MIPAV provides an interface for plug-ins and serves as the foundation for other projects (e.g. JIST). . This package provides downloader/installer for non-redistributable closed-source version of MIPAV and a convenience startup wrapper. You will have a choice of reviewing the license and accepting or declining it upon installation.