Package: fsl-atlases Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 12 Depends: fsl-harvard-oxford-atlases, fsl-juelich-histological-atlas, fsl-jhu-dti-whitematter-atlas, fsl-mni-structural-atlas, fsl-talairach-daemon-atlas, fsl-oxford-thalamic-connectivity-atlas, fsl-bangor-cerebellar-atlas, fsl-mni152-templates Replaces: fsl-data Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-atlases_4.1.6-2_all.deb Size: 3710 SHA256: 9b40eeec07ff32ac8e3fb67d5f2324b38bf55f45d499bbb2e5487828478f513f SHA1: 28a771dd87122bef2f2686fbd374172bc97308d1 MD5sum: 4ee496fca43a6fc861efd7d0a13fa533 Description: FSL's MNI152 standard space stereotaxic brain atlases This meta-package installs all stereotaxic atlases that are shipped with FSL. Package: fsl-bangor-cerebellar-atlas Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1828 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-bangor-cerebellar-atlas_4.1.6-2_all.deb Size: 1326342 SHA256: ff14323c8c6a68129688b30c4ca16cc52ba540c13d99f61aaccd2ebbe9b16f60 SHA1: c47a4c9a7ecc90fc8a4071aaa08602266c202b00 MD5sum: 65d70cb808114e0dcff506c5995e6b97 Description: probabilistic atlas of the human cerebellum This is a probabilistic atlas of the cerebellar lobules in the anatomical space defined by the MNI152 template. Lobules were masked separately on T1-weighted MRI scans (1 mm isotropic resolution) of 20 healthy young participants (10 male, 10 female, average age 23.7 yrs). These cerebella were then aligned to the standard or non-linear version of the whole-brain MNI152 template using a number of commonly used normalization algorithms, or to a previously published cerebellum-only template (Diedrichsen, J., 2006. A spatially unbiased atlas template of the human cerebellum. NeuroImage 33, 127-138). . This package is part of FSL. Package: fsl-first-data Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1132740 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-first-data_4.1.6-2_all.deb Size: 1076152564 SHA256: 951a9bd71965dd4a17b6351c902879de38e4a712e5394c61c8618a385b931e6b SHA1: c497409bdacaa07930d596a175cfb26cbb051e53 MD5sum: 7d46afb7026ef0a6bb6cb7c3406d366b Description: model data for FIRST subcortical brain segmentation This package is part of FSL. Package: fsl-harvard-oxford-atlases Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 8408 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-harvard-oxford-atlases_4.1.6-2_all.deb Size: 7889902 SHA256: c4b49f61e0937e372146549a05f0fd21fec97d2951c26e28da7a90989b358818 SHA1: 8e47df51fddcda6b8b8e1856763554d8c4100671 MD5sum: 742108e156cedb25a407a080ce35d56f Description: probabilistic atlas of human cortical and subcortical brain areas Probabilistic atlases covering 48 cortical and 21 subcortical structural areas, derived from structural data and segmentations kindly provided by the Harvard Center for Morphometric Analysis. . T1-weighted images of 21 healthy male and 16 healthy female subjects (ages 18-50) were individually segmented using semi-automated tools developed in-house. The T1-weighted images were affine-registered to MNI152 space using FLIRT (FSL), and the transforms then applied to the individual labels. Finally, these were combined across subjects to form population probability maps for each label. . This package is part of FSL. Package: fsl-jhu-dti-whitematter-atlas Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 13616 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-jhu-dti-whitematter-atlas_4.1.6-2_all.deb Size: 13666066 SHA256: dd94c11bc29108484d8f9e4499af7bcb8eeec7ec6c3f285de02e4a6af9bff4eb SHA1: 094752d39544279a03c65cd3c597a2f4b3402910 MD5sum: 0c67a8988795cfbd2824ba0083863860 Description: human brain white-matter atlas There are two white-matter atlases, both kindly provided by Dr. Susumu Mori, Laboratory of Brain Anatomical MRI, Johns Hopkins University. . In the ICBM-DTI-81 white-matter labels atlas, 50 white matter tract labels were created by hand segmentation of a standard-space average of diffusion MRI tensor maps from 81 subjects; mean age 39 (18:59), M:42, F: 39. The diffusion data was kindly provided by the ICBM DTI workgroup. . In the JHU white-matter tractography atlas, 20 structures were identified probabilistically by averaging the results of running deterministic tractography on 28 normal subjects (mean age 29, M:17, F:11). . This package is part of FSL. Package: fsl-juelich-histological-atlas Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 4676 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-juelich-histological-atlas_4.1.6-2_all.deb Size: 3747518 SHA256: 3dbdfedc33fbf68a5d1d5f31848053ba9de99936dd2bb419499d2d1a6e978952 SHA1: 0ac81b055d6104fe18a335c47bbc8f75a3f611f8 MD5sum: dffb76db2cb40f15894f3f34c963aa21 Description: brain atlas based on cyto- and myelo-architectonic segmentations A probabilistic atlas created by averaging multi-subject post-mortem cyto- and myelo-architectonic segmentations, performed by the team of Profs Zilles and Amunts at the Research Center Jülich and kindly provided by Simon Eickhoff. . The atlas contains 32 grey matter structures and 10 white matter structures. This is the same data as used in Eickhoff's Anatomy Toolbox v1.5. The atlas is based on the microscopic and quantitative histological examination of ten human post-mortem brains. The histological volumes of these brains were 3D reconstructed and spatially normalised into the space of the MNI single subject template to create a probabilistic map of each area. For the FSL version of this atlas, these probabilistic maps were then linearly transformed into MNI152 space. . This package is part of FSL. Package: fsl-mni-structural-atlas Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 2712 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-mni-structural-atlas_4.1.6-2_all.deb Size: 2624624 SHA256: d40c36a25354e44c578c5f3ee890e7c9f476ec3bd44a4cd209174cad9e77a213 SHA1: b0545e4db835308695a349712f2deb1f0addd13d MD5sum: 53019ce89c9aa1f4174cc9762045a400 Description: hand-segmented single-subject human brain atlas 9 anatomical structural regions, kindly provided by Jack Lancaster at the Research Imaging Center, UTHSCSA, Texas (originally from the McConnell Brain Imaging Centre, MNI). . A single subject's structural image was hand segmented, and the labels were then propagated to more than 50 subjects' structural images using nonlinear registration. Each resulting labelled brain was then transformed into MNI152 space using affine registration, before averaging segmentations across subjects to produce the final probability images. . This package is part of FSL. Package: fsl-mni152-templates Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 56352 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-mni152-templates_4.1.6-2_all.deb Size: 54751930 SHA256: 2647e4cddb7a8dd2c111a1a20be7da8c289fef5268a6dd470817952dc5252158 SHA1: 661e4a03ccb5a65b437a1e5b51e3a5a47186a321 MD5sum: 9911753cd797bd3ca7ebaa84b74f54bc Description: MNI152 stereotaxic brain templates for FSL This package is part of FSL. Package: fsl-oxford-thalamic-connectivity-atlas Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 320 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-oxford-thalamic-connectivity-atlas_4.1.6-2_all.deb Size: 221192 SHA256: 46c303dc9b204f26adcd50218fe4381ef43fc9e33e6caa47eee8b2b514feb04b SHA1: 8e8ed429bae2493c48514d5147cc95d551dabbe1 MD5sum: 1822fab3ba5fbbb5184cd3481f77fa1e Description: probabilistic brain atlas of thalamic white-matter connectivity A probabilistic atlas of 7 sub-thalamic regions, segmented according to their white-matter connectivity to cortical areas, kindly provided by Heidi Johansen-Berg and Timothy Behrens, FMRIB. . This connectivity atlas reports probability of anatomical connection from points in the thalamus to each of 7 cortical zones. These probabilities are calculated using probabilistic diffusion tractography in multiple subjects. . This package is part of FSL. Package: fsl-possum-data Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 41284 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-possum-data_4.1.6-2_all.deb Size: 41622826 SHA256: 31e96aaf6d53566b81c4444da2389ee79441e9f4362626294200c7ad6ad6a9a8 SHA1: 122ab688952a2accc4b05b4dc9b231892ee8549f MD5sum: 245f9f095dc2849190834cfdb4f32ba6 Description: sequence templates for the POSSUM MRI-simulator This package is part of FSL. Package: fsl-talairach-daemon-atlas Source: fsldata Version: 4.1.6-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 616 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: extra Section: non-free/science Filename: pool/non-free/f/fsldata/fsl-talairach-daemon-atlas_4.1.6-2_all.deb Size: 458632 SHA256: 0e79ad030e376bfcd4bd9683d9d241a116d0bc4638a4475e7f839427a1985eb1 SHA1: f27c897b05914597e6c9e26580c7decbfe9c04bc MD5sum: a2238de0fdcc7794cc9231b7e58b2ef1 Description: structural anatomy labels of the Talairach atlas A conversion of the original Talairach structural labellings, kindly provided by Jack Lancaster and Diana Tordesillas Gutiérrez at the Research Imaging Center, UTHSCSA, Texas. . This is a digitised version of the original (coarsely sliced) Talairach atlas (Lancaster 2000) after the application of a correcting affine transform (Lancaster 2007) to register it into MNI152 space. . This package is part of FSL.