Package: ants Version: 1.9.2+svn680.dfsg-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 38212 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libinsighttoolkit3.18, libstdc++6 (>= 4.4.0) Suggests: fsl, gridengine-client Homepage: http://www.picsl.upenn.edu/ANTS/ Priority: extra Section: science Filename: pool/main/a/ants/ants_1.9.2+svn680.dfsg-1~nd10.10+1_amd64.deb Size: 11326468 SHA256: a4806d17a2d77578a6a8357d428b492f79fe46e24a684ad18414177f9bbba264 SHA1: cbd5567bc66694cca62b6778b785612bf501d9ed MD5sum: 5cb2c5d85e93d091fe74f38b363eea10 Description: advanced normalization tools for brain and image analysis Advanced Normalization Tools (ANTS) is an ITK-based suite of normalization, segmentation and template-building tools for quantitative morphometric analysis. Many of the ANTS registration tools are diffeomorphic, but deformation (elastic and BSpline) transformations are available. Unique components of ANTS include multivariate similarity metrics, landmark guidance, the ability to use label images to guide the mapping and both greedy and space-time optimal implementations of diffeomorphisms. The symmetric normalization (SyN) strategy is a part of the ANTS toolkit as is directly manipulated free form deformation (DMFFD). Package: biosig-tools Source: biosig4c++ Version: 0.94.2+svn2552-1~pre1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 664 Depends: libc6 (>= 2.7), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.2.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: science Filename: pool/main/b/biosig4c++/biosig-tools_0.94.2+svn2552-1~pre1~nd10.10+1_amd64.deb Size: 255108 SHA256: 275e8d22af8d64ee770ac18ad97916c90c337694c1151a0e11e2c7ea819b5fc8 SHA1: f692e9536a86f40e6f99240310ebbd29d6ee4566 MD5sum: 8005dd850758356d766c75ba799bc545 Description: format conversion tools for biomedical data formats Based on BioSig library, this package provides command line tools, such as * save2gdf: converter between different file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF, BDF, CWFB. save2gdf can be also used to upload or retrieve data from a bscs server. TODO... Extend? ship client/server? Package: caret-data Version: 5.6~dfsg.1-1 Architecture: all Maintainer: Michael Hanke Installed-Size: 236780 Homepage: http://brainmap.wustl.edu/caret Priority: optional Section: science Filename: pool/main/c/caret-data/caret-data_5.6~dfsg.1-1_all.deb Size: 175205418 SHA256: 329a14cfd5547064496d4f6909db62578412857ad7d5f73e129335481f550b47 SHA1: 7d6cbdd77b04f258327d2bc9fcc4b0494fcf71bc MD5sum: e5f41497554088124975dfc27ba6378b Description: common data files for Caret This package provides online help, tutorials and atlas datasets for Caret. Package: classads Version: 1.0.9-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 116 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libclassad0 (= 1.0.9-1~nd10.10+1), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.cs.wisc.edu/condor/classad Priority: extra Section: misc Filename: pool/main/c/classads/classads_1.0.9-1~nd10.10+1_amd64.deb Size: 30112 SHA256: 7b10b2e3a98e271fc443094b1fc59d3f5ac2ed7a7dc68328f2d7d6035d2ee3a9 SHA1: 95e2df47e22c6d77c0cb8a69da9ec289d9f99db8 MD5sum: 64b6e05ee9ec1c1b07566b001a9f2d74 Description: Condor's classad utilities A classad (classified ad) is a mapping from attribute names to expressions. In the simplest cases, the expressions are simple constants (integer, floating point, or string), thus a form of property list. Attribute expressions can also be more complicated. There is a protocol for evaluating an attribute expression of a classad vis a vis another ad. Two classads match if each ad has attribute requirements that evaluate to true in the context of the other ad. Classad matching is used by the Condor central manager to determine the compatibility of jobs and workstations where they may be run. . This package provides command line tools to manipulate, test and evaluate classads. Package: cython Version: 0.13-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 3680 Depends: python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python2.6, libc6 (>= 2.3) Suggests: gcc Homepage: http://cython.org/ Priority: optional Section: python Filename: pool/main/c/cython/cython_0.13-1~nd10.10+1_amd64.deb Size: 865752 SHA256: 2dcdbac1a90314879ef382ff5fa4ccf87630d47af9a78a4d2d2c255df192d884 SHA1: 0e747b0c464824debec67f456d27395da1616fea MD5sum: e033c32d40dd528dc4cfe07e08efa7f0 Description: C-Extensions for Python Cython is a language that makes writing C extensions for the Python language as easy as Python itself. Cython is based on the well-known Pyrex, but supports more cutting edge functionality and optimizations. . The Cython language is very close to the Python language, but Cython additionally supports calling C functions and declaring C types on variables and class attributes. This allows the compiler to generate very efficient C code from Cython code. . This makes Cython the ideal language for wrapping for external C libraries, and for fast C modules that speed up the execution of Python code. Python-Version: 2.6 Package: cython-dbg Source: cython Version: 0.13-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 5324 Depends: python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), libc6 (>= 2.3), cython (= 0.13-1~nd10.10+1) Suggests: gcc Homepage: http://cython.org/ Priority: extra Section: debug Filename: pool/main/c/cython/cython-dbg_0.13-1~nd10.10+1_amd64.deb Size: 1711982 SHA256: 0e22c074117ed14ab06670c17f8657bc20e8b7c881cc7048dbdacb071846be55 SHA1: 9c19b4e7b7e21c3a2c5783a72db0bf2ccb3320c5 MD5sum: 8d5323e51fb18f0fdc14809311b14ae0 Description: C-Extensions for Python (Debug Build of Cython) This package contains Cython libraries built against versions of Python configured with --pydebug. Python-Version: 2.6 Package: dicomnifti Version: 2.28.14-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 524 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libnifti1 (>> 1.1.0-2), libstdc++6 (>= 4.4.0) Homepage: http://cbi.nyu.edu/software/dinifti.php Priority: optional Section: science Filename: pool/main/d/dicomnifti/dicomnifti_2.28.14-2~maverick.nd1_amd64.deb Size: 158698 SHA256: 9de31342677564bbd2c46db4c101360ba62dc0859527112e462a106307bcab65 SHA1: bfd0234348776fde2a5f160fe8ee5dd7b30d1f84 MD5sum: 8bd2a7a3900e37490b2c03a1ea9b3083 Description: converts DICOM files into the NIfTI format The dinifti program converts MRI images stored in DICOM format to NIfTI format. The NIfTI format is thought to be the new standard image format for medical imaging and can be used with for example with FSL, AFNI, SPM, Caret or Freesurfer. . dinifti converts single files, but also supports fully automatic batch conversions of complete dicomdirs. Additionally, converted NIfTI files can be properly named, using image series information from the DICOM files. Package: fslview Version: 3.1.8+4.1.6-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 4168 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libnewmat10ldbl, libnifti1 (>> 1.1.0-2), libqt3-mt (>= 3:3.3.8-b), libqwt4c2, libstdc++6 (>= 4.4.0), libvtk5.4, libvtk5.4-qt3 Recommends: fslview-doc Suggests: fsl-atlases Conflicts: fsl-fslview Replaces: fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/fslview Priority: optional Section: science Filename: pool/main/f/fslview/fslview_3.1.8+4.1.6-2~maverick.nd1_amd64.deb Size: 1524246 SHA256: f91230348eba03a775059d469f0ca881861af545b7084d3f181e60853701a689 SHA1: 231e4dcf8fa221603446bb875a45f65bd1fd4f60 MD5sum: 4d71f47153aad52bd6293eb15a5bd555 Description: viewer for (f)MRI and DTI data This package provides a viewer for 3d and 4d MRI data as well as DTI images. FSLView is able to display ANALYZE and NIFTI files. The viewer supports multiple 2d viewing modes (orthogonal, lightbox or single slices), but also 3d volume rendering. Additionally FSLView is able to visualize timeseries and can overlay metrical and stereotaxic atlas data. . FSLView is part of FSL. Package: fslview-doc Source: fslview Version: 3.1.8+4.1.6-2~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 3216 Depends: qt3-assistant Homepage: http://www.fmrib.ox.ac.uk/fsl/fslview Priority: optional Section: doc Filename: pool/main/f/fslview/fslview-doc_3.1.8+4.1.6-2~maverick.nd1_all.deb Size: 2378930 SHA256: 0619f0704097efa80d21adb5e852e5ea97a00b84eee6a6c90cb5825b80b6b68e SHA1: e4dbfb09e83e7593d3036b3abd9af6ec4d93fa2c MD5sum: 963b9b6b17837cf2aced5b54ac1b22ca Description: Documentation for FSLView This package provides the online documentation for FSLView. . FSLView is part of FSL. Package: gdf-tools Source: libgdf Version: 0.1.1~svn62-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 156 Depends: neurodebian-popularity-contest, libboost-filesystem1.42.0 (>= 1.42.0-1), libboost-program-options1.42.0 (>= 1.42.0-1), libboost-system1.42.0 (>= 1.42.0-1), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgdf0, libstdc++6 (>= 4.4.0) Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: utils Filename: pool/main/libg/libgdf/gdf-tools_0.1.1~svn62-1~nd10.10+1_amd64.deb Size: 38522 SHA256: 5821636aee0db361f1ea22915a6541db36b7eae636611b3a01e28f583a1e4c85 SHA1: 31300008b550901a6cda1597b9dded4474cb1206 MD5sum: dcf99d705d8e3f4ebf8383f2c112b979 Description: IO library for the GDF -- helper tools GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides the tool shipped with the library (gdf_merger). Package: gifti-bin Source: gifticlib Version: 1.0.9-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 128 Depends: libc6 (>= 2.3.4), libexpat1 (>= 1.95.8), libgiftiio0, libnifti1 (>> 1.1.0-2), zlib1g (>= 1:1.1.4) Homepage: http://www.nitrc.org/projects/gifti Priority: optional Section: utils Filename: pool/main/g/gifticlib/gifti-bin_1.0.9-1~maverick.nd1_amd64.deb Size: 29248 SHA256: 0e3f17a174bdf3fbc004c4c8b3fea6b1de90d5e745355e9907eecccc3c45aa79 SHA1: 5a1f62520a7089fc0f7779a6aad302eb8e8623f9 MD5sum: 371cc7de70de99fd19a3b4aef2fb0940 Description: tools shipped with the GIFTI library GIFTI is an XML-based file format for cortical surface data. This reference IO implementation is developed by the Neuroimaging Informatics Technology Initiative (NIfTI). . This package provides the tools that are shipped with the library (gifti_tool and gifti_test). Package: itksnap Version: 2.1.4-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 8592 Depends: libc6 (>= 2.4), libfltk1.1 (>= 1.1.8~rc1), libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libinsighttoolkit3.18, libstdc++6 (>= 4.4.0), libvtk5.4 Homepage: http://www.itksnap.org Priority: extra Section: science Filename: pool/main/i/itksnap/itksnap_2.1.4-1~nd10.10+1_amd64.deb Size: 3673860 SHA256: a79264a12d4f26931e648f643516ab9d0cc6a25b532010e341fa974afcf5f508 SHA1: 7f5a6e79ec0a526c58cc5468f8349cb265d02833 MD5sum: 4da72a2d0625b05005531ffee8a4276f Description: semi-automatic segmentation of structures in 3D images SNAP provides semi-automatic segmentation of structures in medical images (e.g. magnetic resonance images of the brain) using active contour methods, as well as manual delineation and image navigation. Noteworthy features are: . * Linked cursor for seamless 3D navigation * Manual segmentation in three orthogonal planes at once * Support for many different 3D image formats, including NIfTI * Support for concurrent, linked viewing and segmentation of multiple images * Limited support for color images (e.g., diffusion tensor maps) * 3D cut-plane tool for fast post-processing of segmentation results Package: libbiosig-dev Source: biosig4c++ Version: 0.94.2+svn2552-1~pre1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1624 Depends: libbiosig0 (= 0.94.2+svn2552-1~pre1~nd10.10+1) Homepage: http://biosig.sf.net/ Priority: extra Section: libdevel Filename: pool/main/b/biosig4c++/libbiosig-dev_0.94.2+svn2552-1~pre1~nd10.10+1_amd64.deb Size: 382670 SHA256: 871bf6666953211708dcca961f72a81bc8a98facf2c01ac3534b3a61cfe615cc SHA1: f71070a24308498ccc00bf1f44354228e435289a MD5sum: d65a63646ba8687826a8722dfeeac8c5 Description: I/O library for biomedical data - development files BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://hci.tugraz.at/schloegl/biosig/TESTED . . This package provides header files and static library. Package: libbiosig0 Source: biosig4c++ Version: 0.94.2+svn2552-1~pre1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 888 Depends: libc6 (>= 2.7), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.2.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: libs Filename: pool/main/b/biosig4c++/libbiosig0_0.94.2+svn2552-1~pre1~nd10.10+1_amd64.deb Size: 301736 SHA256: caa3ed631176b58e1f2608e314958fbf735dc6022f073c47e942382226e8a3d4 SHA1: c1a5b5d05e71af1ad9db441e199be3631259d847 MD5sum: f82f4a255e0385c4130b73043df33252 Description: I/O library for biomedical data - dynamic library BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://hci.tugraz.at/schloegl/biosig/TESTED . . This package provides dynamic library. Package: libbiosig0-dbg Source: biosig4c++ Version: 0.94.2+svn2552-1~pre1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 712 Depends: libbiosig0 (= 0.94.2+svn2552-1~pre1~nd10.10+1) Homepage: http://biosig.sf.net/ Priority: extra Section: debug Filename: pool/main/b/biosig4c++/libbiosig0-dbg_0.94.2+svn2552-1~pre1~nd10.10+1_amd64.deb Size: 173484 SHA256: f3858e79acc1e19044461c637e68c7b4ab4f8f65c221599087ba4875d194034b SHA1: 724a774c869875c3843114c4113b9e399c47a04d MD5sum: 3fb116960a282ec362b9c09ac4aa2be0 Description: I/O library for biomedical data - debug symbols BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://hci.tugraz.at/schloegl/biosig/TESTED . . This package provides debug symbols. Package: libclassad-dev Source: classads Version: 1.0.9-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2228 Depends: neurodebian-popularity-contest, libclassad0 (= 1.0.9-1~nd10.10+1) Conflicts: libclassad0-dev Replaces: libclassad0-dev Homepage: http://www.cs.wisc.edu/condor/classad Priority: extra Section: libdevel Filename: pool/main/c/classads/libclassad-dev_1.0.9-1~nd10.10+1_amd64.deb Size: 570982 SHA256: 913a2ad6aef034fa8ea3e8e52de79be08acb6822922a6c13ee51f9e896a00951 SHA1: 1b2ae5f808e0cf8be2d7cf257893982bb0515f23 MD5sum: d3df90c0109b325955485c414e87f7eb Description: library for Condor's classads expression language (development) A classad (classified ad) is a mapping from attribute names to expressions. In the simplest cases, the expressions are simple constants (integer, floating point, or string), thus a form of property list. Attribute expressions can also be more complicated. There is a protocol for evaluating an attribute expression of a classad vis a vis another ad. Two classads match if each ad has attribute requirements that evaluate to true in the context of the other ad. Classad matching is used by the Condor central manager to determine the compatibility of jobs and workstations where they may be run. . This package provides the static library and header files. Package: libclassad0 Source: classads Version: 1.0.9-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1060 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.cs.wisc.edu/condor/classad Priority: extra Section: libs Filename: pool/main/c/classads/libclassad0_1.0.9-1~nd10.10+1_amd64.deb Size: 420636 SHA256: 41fc479782ae56e1bd8559d1cb5e2b99a62d3bb93f480f957cf72ad259e5ce29 SHA1: 55e2b298a37400f7bd065d0fd2276b65f55265e9 MD5sum: dc380f28dbb0e917d6f1b4a5a066a4ed Description: library for Condor's classads expression language A classad (classified ad) is a mapping from attribute names to expressions. In the simplest cases, the expressions are simple constants (integer, floating point, or string), thus a form of property list. Attribute expressions can also be more complicated. There is a protocol for evaluating an attribute expression of a classad vis a vis another ad. Two classads match if each ad has attribute requirements that evaluate to true in the context of the other ad. Classad matching is used by the Condor central manager to determine the compatibility of jobs and workstations where they may be run. . This package provides the runtime library. Package: libgdf-dev Source: libgdf Version: 0.1.1~svn62-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 172 Depends: neurodebian-popularity-contest, libgdf0 (= 0.1.1~svn62-1~nd10.10+1) Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: libdevel Filename: pool/main/libg/libgdf/libgdf-dev_0.1.1~svn62-1~nd10.10+1_amd64.deb Size: 18012 SHA256: c0136f22e38b6bd4f568f193fa921ee27cc76385805f4e8ddf16c29e08267933 SHA1: 98b78e8595a745062d1055eee34271fcf7a3356f MD5sum: c22ba2e877944b9794882a3ac19e2bcf Description: IO library for the GDF -- development library GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides the header files and static library. Package: libgdf0 Source: libgdf Version: 0.1.1~svn62-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 360 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: libs Filename: pool/main/libg/libgdf/libgdf0_0.1.1~svn62-1~nd10.10+1_amd64.deb Size: 102508 SHA256: 0da61e13eeb9b481233fa80b9d39f403cbde1e7d572fac540e27730f8c2bd571 SHA1: 3e31ba6234961eb9aa5c3399d848d8e29915115d MD5sum: f1ffb79e7826a6ea810d6d16f2fcaf61 Description: IO library for the GDF (general dataformat for biosignals) GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package contains the shared library. Package: libgdf0-dbg Source: libgdf Version: 0.1.1~svn62-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 4176 Depends: neurodebian-popularity-contest, libgdf0 (= 0.1.1~svn62-1~nd10.10+1) Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: debug Filename: pool/main/libg/libgdf/libgdf0-dbg_0.1.1~svn62-1~nd10.10+1_amd64.deb Size: 1113332 SHA256: ba86639b221de417aa6da690bb81b55e848d14f1ebd947b87992e02b979f7988 SHA1: 35ac2e5d8234c3e29b2e7f75b9274933d38c4a97 MD5sum: 00ea07aa3640ebcf3ad3fab9604edcb3 Description: IO library for the GDF -- debug symbols GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides debug symbols. Package: libgiftiio-dev Source: gifticlib Version: 1.0.9-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 256 Depends: libgiftiio0 (= 1.0.9-1~maverick.nd1) Homepage: http://www.nitrc.org/projects/gifti Priority: optional Section: libdevel Filename: pool/main/g/gifticlib/libgiftiio-dev_1.0.9-1~maverick.nd1_amd64.deb Size: 65020 SHA256: a5e63ac7d35ef813eed1d81d98075530acbe2f058a945bd212566b4d468bcfc2 SHA1: 47c3332fe15460f79c90c5ca42a2059c93e8e2e9 MD5sum: 6861952fd85b1efebfc95d6a120d9efb Description: IO library for the GIFTI cortical surface data format GIFTI is an XML-based file format for cortical surface data. This reference IO implementation is developed by the Neuroimaging Informatics Technology Initiative (NIfTI). . This package provides the header files and static library. Package: libgiftiio0 Source: gifticlib Version: 1.0.9-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 180 Depends: libc6 (>= 2.4), libexpat1 (>= 1.95.8), libnifti1 (>> 1.1.0-2), zlib1g (>= 1:1.1.4) Homepage: http://www.nitrc.org/projects/gifti Priority: optional Section: libs Filename: pool/main/g/gifticlib/libgiftiio0_1.0.9-1~maverick.nd1_amd64.deb Size: 57604 SHA256: e4754cde9e0089b5774f5bbd3739171f5a68a0115cd50fd84a8c9aa1035fbfcb SHA1: 11983a5c86ae4fab0008551c4f17a5cc0d7ccb1e MD5sum: e7eacce11ea15f9b8b97ea6a242a36c0 Description: IO library for the GIFTI cortical surface data format GIFTI is an XML-based file format for cortical surface data. This reference IO implementation is developed by the Neuroimaging Informatics Technology Initiative (NIfTI). . This package contains the shared library. Package: libnifti-dev Source: nifticlib Version: 2.0.0-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 624 Depends: libnifti2 (= 2.0.0-1~maverick.nd1) Conflicts: libfslio-dev, libnifti0-dev, libnifti1-dev, libniftiio-dev Replaces: libnifti1-dev Homepage: http://niftilib.sourceforge.net Priority: optional Section: libdevel Filename: pool/main/n/nifticlib/libnifti-dev_2.0.0-1~maverick.nd1_amd64.deb Size: 171296 SHA256: a10c25e55440328b1c4ac917735541ee5640176d41cc940c8c6564718d728bf6 SHA1: f0df2a274d65f9c6725a2769503bbbfbb2848624 MD5sum: fc52429aa09b32657fe7d09d3bc8ed11 Description: IO libraries for the NIfTI-1 data format Niftilib is a set of i/o libraries for reading and writing files in the NIfTI-1 data format. NIfTI-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images. . This package provides the header files and static libraries of libniftiio, znzlib and libnifticdf. Package: libnifti-doc Source: nifticlib Version: 2.0.0-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1896 Homepage: http://niftilib.sourceforge.net Priority: optional Section: doc Filename: pool/main/n/nifticlib/libnifti-doc_2.0.0-1~maverick.nd1_all.deb Size: 245398 SHA256: ee170c249d6406abcf28bf82179b9327507e20bc341314191e9339ddbdf725f5 SHA1: 255d82f6d5115000ec47d28dd096cea340261cfc MD5sum: 6293a28d6b4ab6f3e08ee6f766fdd757 Description: NIfTI library API documentation Niftilib is a set of i/o libraries for reading and writing files in the NIfTI-1 data format. NIfTI-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images. . This package provides the library API reference documentation. Package: libnifti2 Source: nifticlib Version: 2.0.0-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 336 Depends: libc6 (>= 2.7), zlib1g (>= 1:1.1.4) Homepage: http://niftilib.sourceforge.net Priority: optional Section: libs Filename: pool/main/n/nifticlib/libnifti2_2.0.0-1~maverick.nd1_amd64.deb Size: 123028 SHA256: 6dc383c542f510dfe43d769101d51d117497011604bbe6dedd2dc2a2ea5e59e1 SHA1: 7e51b50bb5c2e73003a779dcb5818de3ded222d6 MD5sum: c00979d1767d6b98c166fea6528485b8 Description: IO libraries for the NIfTI-1 data format Niftilib is a set of i/o libraries for reading and writing files in the NIfTI-1 data format. NIfTI-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images. . This package contains the shared library of the low-level IO library niftiio, low-level IO library znzlib and the nifticdf shared library that provides functions to compute cumulative distributions and their inverses. Package: libopenmeeg-dev Source: openmeeg Version: 2.0.0.dfsg-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 276 Homepage: http://www-sop.inria.fr/odyssee/software/OpenMEEG/ Priority: extra Section: libdevel Filename: pool/main/o/openmeeg/libopenmeeg-dev_2.0.0.dfsg-2~maverick.nd1_amd64.deb Size: 43850 SHA256: c65760742eb06e6a12fd758b5db143564e27dd25b2eff3f98854e035566991f0 SHA1: 0175dc1e5a5701a201119d7901e256882549e439 MD5sum: 6c45ad3f49003ead9939df00c72abada Description: library for solving EEG and MEG forward and inverse problems OpenMEEG provides state-of-the art tools for processing EEG and MEG data. . The forward problem is implemented using the symmetric Boundary Element method [Kybic et al, 2005], providing excellent accuracy, particularly for superficial cortical sources. The source localization procedures implemented in OpenMEEG are based on a distributed source model, with three different types of regularization: the Minimum Norm, and the L2 and L1 norms of the surface gradient of the sources [Adde et al, 2005]. . This package provides static libraries and header files. Package: libopenmeeg1 Source: openmeeg Version: 2.0.0.dfsg-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 960 Depends: libatlas3gf-base, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libmatio0, libstdc++6 (>= 4.4.0) Homepage: http://www-sop.inria.fr/odyssee/software/OpenMEEG/ Priority: extra Section: science Filename: pool/main/o/openmeeg/libopenmeeg1_2.0.0.dfsg-2~maverick.nd1_amd64.deb Size: 252568 SHA256: 87d6e3f667c493b8615eadbf411b841fde7c47364991ee9256b7e13479a90175 SHA1: 13b3b2307374b46e0421791084bae02fed18238e MD5sum: 30c910d0f9bda2c9d2a4b47cc5812920 Description: library for solving EEG and MEG forward and inverse problems OpenMEEG provides state-of-the art tools for processing EEG and MEG data. . The forward problem is implemented using the symmetric Boundary Element method [Kybic et al, 2005], providing excellent accuracy, particularly for superficial cortical sources. The source localization procedures implemented in OpenMEEG are based on a distributed source model, with three different types of regularization: the Minimum Norm, and the L2 and L1 norms of the surface gradient of the sources [Adde et al, 2005]. Package: lipsia Version: 1.6.0-4~maverick.nd1 Architecture: amd64 Maintainer: Michael Hanke Installed-Size: 3940 Depends: libc6 (>= 2.7), libdcmtk1 (>= 3.5.4), libfftw3-3, libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libgsl0ldbl (>= 1.9), libice6 (>= 1:1.0.0), libnifti1 (>> 1.1.0-2), libqt3-mt (>= 3:3.3.8-b), libsm6, libstdc++6 (>= 4.4.0), libvia0, libx11-6, libxext6, zlib1g (>= 1:1.1.4), via-bin Recommends: dcmtk, lipsia-doc Homepage: http://www.cbs.mpg.de/institute/software/lipsia Priority: optional Section: science Filename: pool/main/l/lipsia/lipsia_1.6.0-4~maverick.nd1_amd64.deb Size: 1350080 SHA256: d6e5814498a44d6f9aa68c26dfe86e5a24398c6727efb40240ab872fad14e217 SHA1: 2887d9c808cbc0861958043d8dea9eee1ccc9c3a MD5sum: 109c0c9b499315d58dad5395c035eb9d Description: analysis suite for MRI and fMRI data Leipzig Image Processing and Statistical Inference Algorithms (LIPSIA) . This is a software package for the data processing and evaluation of functional magnetic resonance images. The analysis of fMRI data comprises various aspects including filtering, spatial transformation, statistical evaluation as well as segmentation and visualization. All these aspects are covered by LIPSIA. For the statistical evaluation, a number of well established and peer-reviewed algorithms were implemented in LIPSIA that allow an efficient and user-friendly processing of fMRI data sets. As the amount of data that must be handled is enormous, an important aspect in the development of LIPSIA was the efficiency of the software implementation. . LIPSIA operates exclusively on data in the VISTA data format. However, the package contains converters for medical image data in iBruker, ANALYZE and NIfTI format -- converting VISTA images into NIfTI files is also supported. Package: lipsia-doc Source: lipsia Version: 1.6.0-4~maverick.nd1 Architecture: all Maintainer: Michael Hanke Installed-Size: 7004 Homepage: http://www.cbs.mpg.de/institute/software/lipsia Priority: optional Section: doc Filename: pool/main/l/lipsia/lipsia-doc_1.6.0-4~maverick.nd1_all.deb Size: 5539260 SHA256: 82338bf6b7642c81e3d25791b543695be0cfdce051003635d2635dd36680651e SHA1: 4605c3847915a816361fb32d35551861a05db84d MD5sum: 405aaaf745427fdfe430d25bb7e8b238 Description: documentation for LIPSIA Leipzig Image Processing and Statistical Inference Algorithms (LIPSIA) . This package provides the LIPSIA documentation in HTML format. Package: matlab-dev Source: matlab Version: 0.0.12~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 44 Depends: neurodebian-popularity-contest Priority: optional Section: devel Filename: pool/main/m/matlab/matlab-dev_0.0.12~nd10.10+1_all.deb Size: 3218 SHA256: cb05ac8dbbf9514bf93bbe4fac917d7e34d1b658dba5e05fe0e77c529b0aae42 SHA1: c762a0580a67830eafde438aeca0a0904ca51cd1 MD5sum: c810d1a448cbd335fa164ef7fdb2e216 Description: helpers for packages building Matlab toolboxes Analogous to Octave a Makefile snippet is provided that configures the locations for architecture independent M-files, binary MEX-extensions, and there corresponding sources. This package can be used as a build-dependency by other packages shipping Matlab toolboxes. Package: mricron Version: 0.20101102.1~dfsg.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 15616 Depends: libatk1.0-0 (>= 1.29.3), libc6 (>= 2.2.5), libcairo2 (>= 1.2.4), libgdk-pixbuf2.0-0 (>= 2.21.6), libglib2.0-0 (>= 2.12.0), libgtk2.0-0 (>= 2.8.0), libpango1.0-0 (>= 1.14.0), libx11-6, mricron-data Suggests: mricron-doc Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: science Filename: pool/main/m/mricron/mricron_0.20101102.1~dfsg.1-1~nd10.10+1_amd64.deb Size: 4864432 SHA256: 31410d695db6991b760a12c7d95da13c78d7cb33816b38e09f78cb600c4e4dc8 SHA1: 17fa91b9d3399ffe570bdd4f44ebf0470a60bcc0 MD5sum: 0f7ad536c8b7fa1ed48436b764096edb Description: magnetic resonance image conversion, viewing and analysis This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . In addition to 'mricron', this package also provides 'dcm2nii' that supports converting DICOM and PAR/REC images into the NIfTI format, and 'npm' for non-parametric data analysis. Package: mricron-data Source: mricron Version: 0.20101102.1~dfsg.1-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1848 Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: science Filename: pool/main/m/mricron/mricron-data_0.20101102.1~dfsg.1-1~nd10.10+1_all.deb Size: 1663088 SHA256: c8f9015ba35861ad34658639a7201cfb09c2c460e7cc23384eb9945ab9210598 SHA1: 787b175f9c1c11e177a3e0c25a80f29fa09af56c MD5sum: aab159e30bbb74d90209ecbfc18db03e Description: data files for MRIcron This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . This package provides data files for MRIcron, such as brain atlases, anatomy, and color schemes. Package: mricron-doc Source: mricron Version: 0.20101102.1~dfsg.1-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1216 Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: doc Filename: pool/main/m/mricron/mricron-doc_0.20101102.1~dfsg.1-1~nd10.10+1_all.deb Size: 734652 SHA256: bf812d97fcf4dd0c7414e1b88f84bb8225c1cb961689da3668765bd6aa735284 SHA1: 45c3dfece61f33cd75a3bb8f19c6fbc39fdfc7b0 MD5sum: 1b0a33ebc649787d7bd5d5c186024c39 Description: data files for MRIcron This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . This package provides documentation for MRIcron in HTML format. Package: neurodebian-desktop Source: neurodebian Version: 0.21~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 332 Depends: ssh-askpass-gnome | ssh-askpass, desktop-base, gnome-icon-theme, neurodebian-popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-desktop_0.21~nd10.10+1_all.deb Size: 111712 SHA256: 8bfb2244f5334bbd70a52c8cbf447d86a2e5945a33ad485e9a1e7c88be2df01c SHA1: 9b790c6d4500598ef64d1b27ae18b42da271b542 MD5sum: 6f409f1e2479a7c564617e2c55db38ef Description: neuroscience research environment This package contains NeuroDebian artwork (icons, background image) and a NeuroDebian menu featuring most popular neuroscience tools automatically installed upon initial invocation. Package: neurodebian-dev Source: neurodebian Version: 0.21~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4328 Depends: devscripts, cowbuilder, python, neurodebian-keyring Recommends: virtualbox-ose, virtualbox-ose-fuse, zerofree Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-dev_0.21~nd10.10+1_all.deb Size: 3767286 SHA256: 2b788dd532274e289a17d68858bbe3141a6f70f1b133410abd69a3b3712595c6 SHA1: 6094c910bbd887f257422a5d3cece57a6f02a7cb MD5sum: c3d131926f533f7dae04c89dad6d016d Description: NeuroDebian development tools neuro.debian.net sphinx website sources and development tools used by NeuroDebian to provide backports for a range of Debian/Ubuntu releases. Package: neurodebian-guest-additions Source: neurodebian Version: 0.21~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 232 Pre-Depends: virtualbox-ose-guest-utils, virtualbox-ose-guest-x11, virtualbox-ose-guest-dkms Depends: sudo, neurodebian-desktop, gdm, update-manager-gnome, update-notifier Recommends: chromium-browser Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-guest-additions_0.21~nd10.10+1_all.deb Size: 10240 SHA256: 5772dfbb5e4f3335254222ea0f4eb17deee3d90bd49e2806c239b3776453f37c SHA1: 216fe3d40494e94489fb4524156b3c06176eaaca MD5sum: 4b1ad8b29a0243a716ef7d13d8fa6c1e Description: NeuroDebian guest additions (DO NOT INSTALL OUTSIDE VIRTUALBOX) This package configures a Debian installation as a guest operating system in a VirtualBox-based virtual machine for NeuroDebian. . DO NOT install this package unless you know what you are doing! For example, installation of this package relaxes several security mechanisms. Package: neurodebian-keyring Source: neurodebian Version: 0.21~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 56 Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-keyring_0.21~nd10.10+1_all.deb Size: 4082 SHA256: 176578d88164d3b43a813f17a14e2a2dd84870935d9323d97306fcaf4ea6f1b9 SHA1: f9c130c1902ca48574671dc61b6ae65962d5b44b MD5sum: e52e402a5849175a8fc538aaaeb1c5a2 Description: GnuPG archive keys of the NeuroDebian archive The NeuroDebian project digitally signs its Release files. This package contains the archive keys used for that. Package: neurodebian-popularity-contest Source: neurodebian Version: 0.21~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 40 Depends: popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-popularity-contest_0.21~nd10.10+1_all.deb Size: 3230 SHA256: 0559010d9c397ee3727d6db1ecdb22c588a49fe199a9476202ccbd29e12e19bc SHA1: 8d22b7b397ec97222088cd2f00253f1b16b6a773 MD5sum: 8a039e889432849f3d64a32778083f1c Description: Helper for NeuroDebian popularity contest submissions This package is a complement to a generic popularity-contest package to enable submission of usage statistics to NeuroDebian in addition to the submissions to the underlying distribution (e.g. Debian or Ubuntu) popcon server. . It has an effect only if you have decided to participate in the Popularity Contest. . Your participation in popcon is important for following reasons: - Popular packages receive more attention from developers, bugs are fixed faster and updates are provided quicker. - Assure that we do not drop support for a previous release of Debian or Ubuntu while are active users. - User statistics could be used by upstream research software developers to acquire funding for continued development. . You can always enable or disable your participation in popcon by running 'dpkg-reconfigure popularity-contest' as root. Package: nifti-bin Source: nifticlib Version: 2.0.0-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 200 Depends: libc6 (>= 2.7), libnifti2 Homepage: http://niftilib.sourceforge.net Priority: optional Section: utils Filename: pool/main/n/nifticlib/nifti-bin_2.0.0-1~maverick.nd1_amd64.deb Size: 62302 SHA256: e74b6f17efa9e03e859a450192fe35c0be66c33552d59123271c6704f169758a SHA1: b43f633e1de2af8b1463260231d9e49d819776ef MD5sum: 7947b46fb4d71466cde1e787e1b4f51a Description: tools shipped with the NIfTI library Niftilib is a set of i/o libraries for reading and writing files in the NIfTI-1 data format. NIfTI-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images. . This package provides the tools that are shipped with the library (nifti_tool, nifti_stats and nifti1_test). Package: octave-biosig Source: biosig4c++ Version: 0.94.2+svn2552-1~pre1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1608 Depends: libblas3gf | libblas.so.3gf | libatlas3gf-base, libc6 (>= 2.7), libcholmod1.7.1 (>= 1:3.4.0), libfftw3-3, libgcc1 (>= 1:4.1.1), libgfortran3 (>= 4.3), libhdf5-serial-1.8.4 | libhdf5-1.8.4, liblapack3gf | liblapack.so.3gf | libatlas3gf-base, libncurses5 (>= 5.7+20100313), libreadline6 (>= 6.0), libstdc++6 (>= 4.2.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: science Filename: pool/main/b/biosig4c++/octave-biosig_0.94.2+svn2552-1~pre1~nd10.10+1_amd64.deb Size: 587074 SHA256: d04f886fe4842ecbda8745738572b6c781fe7134732c5d98d35af675007f1f60 SHA1: a65991ad148584de87c84541cb4d21ab8db54e7e MD5sum: 5707fa9dd7f8ee9ff35487c0ce3aa761 Description: Octave bindings for BioSig library This package provides Octave bindings for BioSig library. Primary goal -- I/O interface to variety of biomedical file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF. Package: octave-gdf Source: libgdf Version: 0.1.1~svn62-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 384 Depends: neurodebian-popularity-contest, octave3.2 (>= 3.2.4), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgdf0, libstdc++6 (>= 4.4.0) Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: science Filename: pool/main/libg/libgdf/octave-gdf_0.1.1~svn62-1~nd10.10+1_amd64.deb Size: 131368 SHA256: b11f0d7a3f48caed33a99a475cdbe8e8943e724e90a23756c9c5a8442ccb12dd SHA1: 753e8383a500a7738947b4d558b97a9e4795064e MD5sum: ef661721dc0c3d94b940bce052ffcbed Description: IO library for the GDF -- Octave interface GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides Octave bindings for libgdf. . HIGHLY EXPERIMENTAL -- USE AT YOUR OWN RISK. Package: openmeeg-tools Source: openmeeg Version: 2.0.0.dfsg-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 600 Depends: libatlas3gf-base, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libmatio0, libopenmeeg1, libstdc++6 (>= 4.4.0) Homepage: http://www-sop.inria.fr/odyssee/software/OpenMEEG/ Priority: extra Section: science Filename: pool/main/o/openmeeg/openmeeg-tools_2.0.0.dfsg-2~maverick.nd1_amd64.deb Size: 163230 SHA256: fad9d47731fc75238a1a6da647637e110faa81579ba4ea54e5cd1d1e2423a911 SHA1: 724af280bad2953af20b8db0f737b6dde84908dc MD5sum: cde12d4b4d0cd81fb8f41175c72a78df Description: tools for solving EEG and MEG forward and inverse problems OpenMEEG provides state-of-the art tools for processing EEG and MEG data. . The forward problem is implemented using the symmetric Boundary Element method [Kybic et al, 2005], providing excellent accuracy, particularly for superficial cortical sources. The source localization procedures implemented in OpenMEEG are based on a distributed source model, with three different types of regularization: the Minimum Norm, and the L2 and L1 norms of the surface gradient of the sources [Adde et al, 2005]. . This package provides command line tools. Package: psychopy Version: 1.63.00+git8-g46ee897.dfsg-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4344 Depends: neurodebian-popularity-contest, python (>= 2.4), python-support (>= 0.90.0), python-pyglet | python-pygame, python-opengl, python-numpy, python-matplotlib, python-lxml, python-configobj Recommends: python-wxgtk2.8, python-pyglet, python-pygame, python-openpyxl, python-imaging, python-serial, python-scipy, libavbin0 Suggests: python-iolabs, python-pyepl Homepage: http://www.psychopy.org Priority: optional Section: science Filename: pool/main/p/psychopy/psychopy_1.63.00+git8-g46ee897.dfsg-1~nd10.10+1_all.deb Size: 2344000 SHA256: 25c4c77f5b28825f89ebba63cd5e998e39e524c1404303be73754a3f87e3518d SHA1: 78639ef28ecbaa1dff90f02918d7600e11059983 MD5sum: 9bacab898c6c389bdf0a3b2ce1252d42 Description: environment for creating psychology stimuli in Python PsychoPy provides an environment for creating psychology stimuli using Python scripting language. It combines the graphical strengths of OpenGL with easy Python syntax to give psychophysics a free and simple stimulus presentation and control package. . The goal is to provide, for the busy scientist, tools to control timing and windowing and a simple set of pre-packaged stimuli and methods. PsychoPy features - High-level powerful scripting language (Python) - Simple syntax - Use of hardware-accelerated graphics (OpenGL) - Integration with Spectrascan PR650 for easy monitor calibration - Simple routines for staircase and constant stimuli experimental methods as well as curve-fitting and bootstrapping - Simple (or complex) GUIs via wxPython - Easy interfaces to joysticks, mice, sound cards etc. via PyGame - Video playback (MPG, DivX, AVI, QuickTime, etc.) as stimuli Python-Version: 2.6 Package: python-biosig Source: biosig4c++ Version: 0.94.2+svn2552-1~pre1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1016 Depends: libc6 (>= 2.7), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.2.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: python Filename: pool/main/b/biosig4c++/python-biosig_0.94.2+svn2552-1~pre1~nd10.10+1_amd64.deb Size: 334928 SHA256: fc11a01328d12a2f57fababaa480a7178d65057c5aebfa2f37622b8bd32b48ed SHA1: 4182c59767f2ca23911934058a047ba23a60d582 MD5sum: 1d4a6fd88abe72393692299b001f74e5 Description: Python bindings for BioSig library This package provides Python bindings for BioSig library. Primary goal -- I/O interface to variety of biomedical file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF. Package: python-brian Source: brian Version: 1.2.2~svn2229-1~pre1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1736 Depends: python (>= 2.6), python-support (>= 0.90.0), python-brian-lib (>= 1.2.2~svn2229-1~pre1~nd10.10+1), python-matplotlib (>= 0.90.1), python-numpy (>= 1.3.0), python-scipy (>= 0.7.0) Recommends: python-sympy Suggests: python-brian-doc, python-nose Homepage: http://www.briansimulator.org/ Priority: extra Section: python Filename: pool/main/b/brian/python-brian_1.2.2~svn2229-1~pre1~nd10.10+1_all.deb Size: 296622 SHA256: 0eb10161d7cdb8ea735962a89d977c7dd85dbc7ff6874b61d2dbb69ef8f22f7f SHA1: abff994408f18d5bea5c4576b1a0e9dc0dbff555 MD5sum: 67eb7b4194b77423cc706bf1f60a27b0 Description: simulator for spiking neural networks Brian is a clock-driven simulator for spiking neural networks. It is designed with an emphasis on flexibility and extensibility, for rapid development and refinement of neural models. Neuron models are specified by sets of user-specified differential equations, threshold conditions and reset conditions (given as strings). The focus is primarily on networks of single compartment neuron models (e.g. leaky integrate-and-fire or Hodgkin-Huxley type neurons). Features include: - a system for specifying quantities with physical dimensions - exact numerical integration for linear differential equations - Euler, Runge-Kutta and exponential Euler integration for nonlinear differential equations - synaptic connections with delays - short-term and long-term plasticity (spike-timing dependent plasticity) - a library of standard model components, including integrate-and-fire equations, synapses and ionic currents - a toolbox for automatically fitting spiking neuron models to electrophysiological recordings Package: python-brian-doc Source: brian Version: 1.2.2~svn2229-1~pre1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4004 Depends: libjs-jquery Suggests: python-brian Homepage: http://www.briansimulator.org/ Priority: extra Section: doc Filename: pool/main/b/brian/python-brian-doc_1.2.2~svn2229-1~pre1~nd10.10+1_all.deb Size: 860490 SHA256: 82e24868fb4b7d44576842e376ee5d641cb3fbf697e39cffc865dff38273bdbf SHA1: 627055882f14388348ae5d43b1ab5e9b8a205a63 MD5sum: 8c0526915891e659a953c38023211294 Description: simulator for spiking neural networks - documentation Brian is a clock-driven simulator for spiking neural networks. . This package provides user's manual (in HTML and PDF formats), examples and demos. Package: python-brian-lib Source: brian Version: 1.2.2~svn2229-1~pre1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 216 Depends: python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.briansimulator.org/ Priority: extra Section: python Filename: pool/main/b/brian/python-brian-lib_1.2.2~svn2229-1~pre1~nd10.10+1_amd64.deb Size: 53700 SHA256: c4e18e35e033caa6ecd678583377fa8e38c6360e5b33953ec440e6577fba10b9 SHA1: 8f932c56ff80357356d560b21f57b299eb345f9b MD5sum: 8e87a50310dec3829576929260cb67c8 Description: simulator for spiking neural networks -- extensions Brian is a clock-driven simulator for spiking neural networks. . This package provides Python binary extensions. Package: python-dicom Source: pydicom Version: 0.9.4.1-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1804 Depends: python (>= 2.5), python-support (>= 0.90.0) Recommends: python-numpy, python-imaging Suggests: python-matplotlib Homepage: http://code.google.com/p/pydicom/ Priority: optional Section: python Filename: pool/main/p/pydicom/python-dicom_0.9.4.1-1~maverick.nd1_all.deb Size: 360124 SHA256: e11a5ca1d87ad166eefa550498743db961ae2727733b6f01d40d177c7d9c53dd SHA1: 3f767eb7480ef44c6c7a56a839f01e99f8cf849d MD5sum: 0adfc3a91a5b7419208ef94bb7a699a9 Description: DICOM medical file reading and writing pydicom is a pure Python module for parsing DICOM files. DICOM is a standard (http://medical.nema.org) for communicating medical images and related information such as reports and radiotherapy objects. . pydicom makes it easy to read DICOM files into natural pythonic structures for easy manipulation. Modified datasets can be written again to DICOM format files. Package: python-joblib Source: joblib Version: 0.4.6-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 244 Depends: python, python-support (>= 0.90.0) Recommends: python-numpy, python-nose, python-simplejson Homepage: http://packages.python.org/joblib/ Priority: optional Section: python Filename: pool/main/j/joblib/python-joblib_0.4.6-1~nd10.10+1_all.deb Size: 38692 SHA256: a0cc8506c39110caa588b89a0da48a65a64bed86a2e661e0c17230882ba10a12 SHA1: 221ed9fbe866ad858176eb1c1ebbfd4a3a6fb3d8 MD5sum: bb0aa7c0fb35a2fe7f353ae0ad24e403 Description: tools to provide lightweight pipelining in Python Joblib is a set of tools to provide lightweight pipelining in Python. In particular, joblib offers: - transparent disk-caching of the output values and lazy re-evaluation (memoize pattern) - easy simple parallel computing - logging and tracing of the execution . Joblib is optimized to be fast and robust in particular on large, long-running functions and has specific optimizations for numpy arrays. Package: python-mlpy Source: mlpy Version: 2.2.0~dfsg1-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 424 Depends: python (>= 2.4), python-support (>= 0.90.0), python2.6, python-numpy, python-mlpy-lib (>= 2.2.0~dfsg1-1~maverick.nd1) Suggests: python-mvpa Provides: python2.6-mlpy Homepage: https://mlpy.fbk.eu/ Priority: optional Section: python Filename: pool/main/m/mlpy/python-mlpy_2.2.0~dfsg1-1~maverick.nd1_all.deb Size: 55840 SHA256: 8283e4ed0f79671d42b030290729eda5c540214d36125e1b06fd0b5b3c9a21c7 SHA1: 4bd22103a057fe6eecf855acf12e7e077d38fc19 MD5sum: b0171fc77f895c31946c6d7aed80768d Description: high-performance Python package for predictive modeling mlpy provides high level procedures that support, with few lines of code, the design of rich Data Analysis Protocols (DAPs) for preprocessing, clustering, predictive classification and feature selection. Methods are available for feature weighting and ranking, data resampling, error evaluation and experiment landscaping. . mlpy includes: SVM (Support Vector Machine), KNN (K Nearest Neighbor), FDA, SRDA, PDA, DLDA (Fisher, Spectral Regression, Penalized, Diagonal Linear Discriminant Analysis) for classification and feature weighting, I-RELIEF, DWT and FSSun for feature weighting, *RFE (Recursive Feature Elimination) and RFS (Recursive Forward Selection) for feature ranking, DWT, UWT, CWT (Discrete, Undecimated, Continuous Wavelet Transform), KNN imputing, DTW (Dynamic Time Warping), Hierarchical Clustering, k-medoids, Resampling Methods, Metric Functions, Canberra indicators. Python-Version: 2.6 Package: python-mlpy-doc Source: mlpy Version: 2.2.0~dfsg1-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1132 Depends: libjs-jquery Suggests: python-mlpy Homepage: https://mlpy.fbk.eu/ Priority: optional Section: doc Filename: pool/main/m/mlpy/python-mlpy-doc_2.2.0~dfsg1-1~maverick.nd1_all.deb Size: 478862 SHA256: d4a1ca68b49b3b1fa7a35abdc1e263f00970d4a6cfde9fd5388508b5c3273ce9 SHA1: 3a203bde333a49868ea27467bb04fa9eb6870af6 MD5sum: da3c2ef1ca5363c2774440218a32fb73 Description: documention and examples for mlpy mlpy provides high level procedures that support, with few lines of code, the design of rich Data Analysis Protocols (DAPs) for preprocessing, clustering, predictive classification and feature selection. Methods are available for feature weighting and ranking, data resampling, error evaluation and experiment landscaping. . This package provides user documentation for mlpy in various formats (HTML, PDF). Package: python-mlpy-lib Source: mlpy Version: 2.2.0~dfsg1-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 312 Depends: libc6 (>= 2.3.4), libgsl0ldbl (>= 1.9), python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python-numpy Provides: python2.6-mlpy-lib Homepage: https://mlpy.fbk.eu/ Priority: optional Section: python Filename: pool/main/m/mlpy/python-mlpy-lib_2.2.0~dfsg1-1~maverick.nd1_amd64.deb Size: 70820 SHA256: bbfb06fd94be6d0d3288014ace6eece19424cb7b7c2fe7743673d8c6f9d9a568 SHA1: 01d9f84c07de1f9b4e987bf20d41c9df399364e9 MD5sum: 25a7200ed3517d83a23bc8e928a374c1 Description: low-level implementations and bindings for mlpy This is an add-on package for the mlpy providing compiled core functionality. Python-Version: 2.6 Package: python-mvpa Source: pymvpa Version: 0.4.5-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4144 Depends: python (>= 2.5), python-support (>= 0.90.0), python2.6, python-numpy, python-mvpa-lib (>= 0.4.5-1~nd10.10+1) Recommends: python-nifti, python-psyco, python-mdp, python-scipy, shogun-python-modular, python-pywt, python-matplotlib, python-reportlab Suggests: fslview, fsl, python-nose, python-lxml, python-openopt, python-rpy, python-mvpa-doc Provides: python2.6-mvpa Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa/python-mvpa_0.4.5-1~nd10.10+1_all.deb Size: 2156652 SHA256: 0d228449c2d9bda679310a534b862c74f86e0ee7a3659e067e77dc9559d1a363 SHA1: 3bc906f2b7eed67b9788f3adbf41e724430515eb MD5sum: 8020da8cb6a4df47fd81669bffe7ee2c Description: multivariate pattern analysis with Python Python module to ease pattern classification analyses of large datasets. It provides high-level abstraction of typical processing steps (e.g. data preparation, classification, feature selection, generalization testing), a number of implementations of some popular algorithms (e.g. kNN, GNB, Ridge Regressions, Sparse Multinomial Logistic Regression), and bindings to external machine learning libraries (libsvm, shogun). . While it is not limited to neuroimaging data (e.g. fMRI, or EEG) it is eminently suited for such datasets. Python-Version: 2.6 Package: python-mvpa-doc Source: pymvpa Version: 0.4.5-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 41004 Depends: libjs-jquery Suggests: python-mvpa Homepage: http://www.pymvpa.org Priority: optional Section: doc Filename: pool/main/p/pymvpa/python-mvpa-doc_0.4.5-1~nd10.10+1_all.deb Size: 9012602 SHA256: 402a7262245b46a4a32abe12b7659382d1644c210cc199e713da6ac36ff16864 SHA1: 426b48e5d94d41837567eca8fd7957313c13eec9 MD5sum: 3ef659e7f06589db1fccabe36d7c9e6d Description: documentation and examples for PyMVPA PyMVPA documentation in various formats (HTML, TXT) including * User manual * Developer guidelines * API documentation * BibTeX references file . Additionally, all example scripts shipped with the PyMVPA sources are included. Package: python-mvpa-lib Source: pymvpa Version: 0.4.5-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 184 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), libsvm2, python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python-numpy Provides: python2.6-mvpa-lib Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa/python-mvpa-lib_0.4.5-1~nd10.10+1_amd64.deb Size: 34792 SHA256: 9d0e277502dbe4dbcb5c91ebcf27e12574fe8c65af9554b712b099968b5b3e5a SHA1: 1aae51d858fe8fa46b36ecf454dd64d534c107bc MD5sum: 9d1a96c5343268a4bb3fed073c4a2b97 Description: low-level implementations and bindings for PyMVPA This is an add-on package for the PyMVPA framework. It provides a low-level implementation of an SMLR classifier and custom Python bindings for the LIBSVM library. Python-Version: 2.6 Package: python-networkx Version: 1.1-2~maverick.nd1 Architecture: all Maintainer: Debian Python Modules Team Installed-Size: 2628 Depends: python (>= 2.5), python-support (>= 0.90.0) Recommends: python-numpy, python-scipy, python-pygraphviz | python-pydot, python-pkg-resources, python-matplotlib, python-yaml Homepage: http://networkx.lanl.gov/ Priority: optional Section: python Filename: pool/main/p/python-networkx/python-networkx_1.1-2~maverick.nd1_all.deb Size: 679658 SHA256: 1b57041f1c6383b2c67aee7c5adced6e17c27769de5768b2a5625146b12aefed SHA1: 7dea67b649381618bd855eeea17892721e71ec39 MD5sum: ffbdff4561f896997795d265f14d2263 Description: tool to create, manipulate and study complex networks NetworkX is a Python-based package for the creation, manipulation, and study of the structure, dynamics, and functions of complex networks. . The structure of a graph or network is encoded in the edges (connections, links, ties, arcs, bonds) between nodes (vertices, sites, actors). If unqualified, by graph we mean a simple undirected graph, i.e. no self-loops and no multiple edges are allowed. By a network we usually mean a graph with weights (fields, properties) on nodes and/or edges. . The potential audience for NetworkX includes: mathematicians, physicists, biologists, computer scientists, social scientists. Package: python-nibabel Source: nibabel Version: 1.0.0-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2776 Depends: python (>= 2.5), python-support (>= 0.90.0), python-numpy, python-scipy Recommends: python-dicom Suggests: python-nibabel-doc Provides: python2.6-nibabel Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: python Filename: pool/main/n/nibabel/python-nibabel_1.0.0-1~nd10.10+1_all.deb Size: 1056526 SHA256: 3b11c09b2c115daf761f1963f87bfdb5c5eb28c5cec63f91d437c1bcbd9a1c1a SHA1: 4b99d8369f4e768f954b8875fba2ece9971dacd6 MD5sum: 8d566a6c283d548c35ba2b09728d2d86 Description: Python bindings to various neuroimaging data formats This package provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package also provides a commandline tool for conversion of PAR/REC to NIfTI images. Python-Version: 2.6 Package: python-nibabel-doc Source: nibabel Version: 1.0.0-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2716 Depends: libjs-jquery Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: doc Filename: pool/main/n/nibabel/python-nibabel-doc_1.0.0-1~nd10.10+1_all.deb Size: 398618 SHA256: d66b8ac32caaeaad1ab1314ba94df2f0cb7d1cf1396f95916534790f0bb932c5 SHA1: d965fd80013ee6b53bbb48fef2e7f59cc53b415f MD5sum: b66cadb2152267e718c84f17a3af396e Description: documentation for NiBabel NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package provides the documentation in HTML format. Package: python-nifti Source: pynifti Version: 0.20100607.1-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 1184 Depends: libc6 (>= 2.4), libnifti1 (>> 1.1.0-2), python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python2.6, python-numpy, python-numpy-ext, libjs-jquery Provides: python2.6-nifti Homepage: http://niftilib.sourceforge.net/pynifti/ Priority: optional Section: python Filename: pool/main/p/pynifti/python-nifti_0.20100607.1-1~maverick.nd1_amd64.deb Size: 284858 SHA256: d8e061875b3be7bfb75f72e38c359fc527ed1e4c24f097b5b436e7469a439435 SHA1: aef50ff2e8816ff31983a9b436d9809a9b520cb0 MD5sum: 922d8a157e55c3f2d56104ebf8697fd5 Description: Python interface to the NIfTI I/O libraries Using PyNIfTI one can easily read and write NIfTI and ANALYZE images from within Python. The NiftiImage class provides Python-style access to the full header information. Image data is made available via NumPy arrays. Python-Version: 2.6 Package: python-nipype Source: nipype Version: 0.3.2-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1716 Depends: python (>= 2.5), python-support (>= 0.90.0), python-scipy, python-simplejson, python-traits Recommends: python-nifti, ipython, python-nose, python-networkx Suggests: fsl, afni, lipsia, python-nipy Provides: python2.6-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: python Filename: pool/main/n/nipype/python-nipype_0.3.2-1~maverick.nd1_all.deb Size: 269190 SHA256: 34d1e732c2f6b613f9cb99cd2c3961a6283349484beef4a8265369f1961f10b7 SHA1: 811f18c612a1a546f438410fae8a234b9cbedefa MD5sum: aeec13b279567a2dca79648b3828f8e7 Description: Neuroimaging data analysis pipelines in Python Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). Package: python-nipype-doc Source: nipype Version: 0.3.2-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 3224 Depends: libjs-jquery Suggests: python-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: doc Filename: pool/main/n/nipype/python-nipype-doc_0.3.2-1~maverick.nd1_all.deb Size: 774716 SHA256: f64d2d2fefd479b9392f117205223ff24c117c26cdc3af6fe29b77466f650d15 SHA1: fd53363af0225c7bb44a539b22a13f9f009a9a13 MD5sum: 21bbda904e514b4c334c7e723347f666 Description: Neuroimaging data analysis pipelines in Python -- documentation Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). . This package contains Nipype documentation in various formats. Package: python-nitime Source: nitime Version: 0.2-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 752 Depends: python-numpy, python-scipy Recommends: python-matplotlib, python-nose, python-nibabel, python-networkx Homepage: http://nipy.org/nitime Priority: extra Section: python Filename: pool/main/n/nitime/python-nitime_0.2-1~nd10.10+1_all.deb Size: 312900 SHA256: a597d5285ed2764312a046981666d2fa05fe4e643eecaa260b7c0aec0eb27449 SHA1: 3396ad0f1d125996d6abd2bdc9840d03fe9733ec MD5sum: f121a3106a95ecadd3bad854468df318 Description: timeseries analysis for neuroscience data (nitime) Nitime is a Python module for time-series analysis of data from neuroscience experiments. It contains a core of numerical algorithms for time-series analysis both in the time and spectral domains, a set of container objects to represent time-series, and auxiliary objects that expose a high level interface to the numerical machinery and make common analysis tasks easy to express with compact and semantically clear code. Package: python-nitime-doc Source: nitime Version: 0.2-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4096 Depends: libjs-jquery Suggests: python-nitime Homepage: http://nipy.org/nitime Priority: extra Section: doc Filename: pool/main/n/nitime/python-nitime-doc_0.2-1~nd10.10+1_all.deb Size: 2663834 SHA256: ad266363c0d0170244078baec756d2712034342903a5a6546ea73d52200fcea9 SHA1: b308c4bd273ba626d076fe7e83544668773ab7d9 MD5sum: 1226038c73f2b8fbeabd32bf60f09ad7 Description: timeseries analysis for neuroscience data (nitime) -- documentation Nitime is a Python module for time-series analysis of data from neuroscience experiments. . This package provides the documentation in HTML format. Package: python-openmeeg Source: openmeeg Version: 2.0.0.dfsg-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 600 Depends: libatlas3gf-base, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libmatio0, libopenmeeg1, libpython2.6 (>= 2.6), libstdc++6 (>= 4.4.0), python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python-numpy Provides: python2.6-openmeeg Homepage: http://www-sop.inria.fr/odyssee/software/OpenMEEG/ Priority: extra Section: python Filename: pool/main/o/openmeeg/python-openmeeg_2.0.0.dfsg-2~maverick.nd1_amd64.deb Size: 157526 SHA256: 3a95190b1f9aa9128f1ff07a9927bf4285f605c029ff87b7f763905047efe436 SHA1: 303aa983399d068350fe8c0b289533ecfd0ee69e MD5sum: 59f8f5cd00801d0d43f458256051b35c Description: Python bindings for openmeeg library OpenMEEG provides state-of-the art tools for processing EEG and MEG data. . The forward problem is implemented using the symmetric Boundary Element method [Kybic et al, 2005], providing excellent accuracy, particularly for superficial cortical sources. The source localization procedures implemented in OpenMEEG are based on a distributed source model, with three different types of regularization: the Minimum Norm, and the L2 and L1 norms of the surface gradient of the sources [Adde et al, 2005]. . This package provides Python bindings for OpenMEEG library. Python-Version: 2.6 Package: python-openpyxl Source: openpyxl Version: 1.1.0-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 448 Depends: python, python-support (>= 0.90.0) Recommends: python-nose Homepage: http://bitbucket.org/ericgazoni/openpyxl/ Priority: optional Section: python Filename: pool/main/o/openpyxl/python-openpyxl_1.1.0-1~maverick.nd1_all.deb Size: 49184 SHA256: 5cdbef28c90ba9a004c40dcd1a7dbd46a47e8d071510627d43dba4a94aee6b57 SHA1: e7c9e1bcf4345c507210870199e01a8fcc514fdd MD5sum: e5783f04682ec139db7681ef9f707d32 Description: module to read/write OpenXML xlsx/xlsm files Openpyxl is a pure Python module to read/write Excel 2007 (OpenXML) xlsx/xlsm files. Package: python-pyepl Source: pyepl Version: 1.1.0-3~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 1696 Depends: python (<< 2.7), python (>= 2.6), python-central (>= 0.6.11), python-pyepl-common (= 1.1.0-3~maverick.nd1), python-numpy, python-imaging, python-pygame, python-pyode, python-opengl, ttf-dejavu, libasound2 (>> 1.0.22), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libode1, libsamplerate0, libsndfile1 (>= 1.0.20), libstdc++6 (>= 4.4.0) Conflicts: python2.3-pyepl, python2.4-pyepl Replaces: python2.3-pyepl, python2.4-pyepl Provides: python2.6-pyepl Homepage: http://pyepl.sourceforge.net/ Priority: optional Section: python Filename: pool/main/p/pyepl/python-pyepl_1.1.0-3~maverick.nd1_amd64.deb Size: 381566 SHA256: 5c2db2b03d580c1c40aeb4768b772aae61ebab32a1564b46d58eab61efb2e4a1 SHA1: f900b6fb4e1cabbc59cf0d16db41753165d0422c MD5sum: 8f8968da5e76f1f8748211134d2e645a Description: module for coding psychology experiments in Python PyEPL is a stimuli delivery and response registration toolkit to be used for generating psychology (as well as neuroscience, marketing research, and other) experiments. . It provides - presentation: both visual and auditory stimuli - responses registration: both manual (keyboard/joystick) and sound (microphone) time-stamped - sync-pulsing: synchronizing your behavioral task with external acquisition hardware - flexibility of encoding various experiments due to the use of Python as a description language - fast execution of critical points due to the calls to linked compiled libraries . This toolbox is here to be an alternative for a widely used commercial product E'(E-Prime) . This package provides PyEPL for supported versions of Python. Python-Version: 2.6 Package: python-pyepl-common Source: pyepl Version: 1.1.0-3~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 852 Depends: python Homepage: http://pyepl.sourceforge.net/ Priority: optional Section: python Filename: pool/main/p/pyepl/python-pyepl-common_1.1.0-3~maverick.nd1_all.deb Size: 817816 SHA256: c48e4f818f9d5f08f12d59d6c1131b7f163f29c8801d3373889a7c20795d2d9f SHA1: 82228fe2202df811391f45df27ceaabcc7abca89 MD5sum: f4abbefb9d51c38b9370f48229577970 Description: module for coding psychology experiments in Python PyEPL is a stimuli delivery and response registration toolkit to be used for generating psychology (as well as neuroscience, marketing research, and other) experiments. . It provides - presentation: both visual and auditory stimuli - responses registration: both manual (keyboard/joystick) and sound (microphone) time-stamped - sync-pulsing: synchronizing your behavioral task with external acquisition hardware - flexibility of encoding various experiments due to the use of Python as a description language - fast execution of critical points due to the calls to linked compiled libraries . This toolbox is here to be an alternative for a widely used commercial product E'(E-Prime) . This package provides common files such as images. Package: python-pyglet Source: pyglet Version: 1.1.4.dfsg-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4356 Depends: neurodebian-popularity-contest, python (>= 2.4), python-support (>= 0.90.0), python-ctypes | python (>= 2.5), libgtk2.0-0, libgl1 | libgl1-mesa-swx11, libglu1 | libglu1-mesa Recommends: libasound2 | libopenal1 Provides: python2.6-pyglet Homepage: http://www.pyglet.org Priority: optional Section: python Filename: pool/main/p/pyglet/python-pyglet_1.1.4.dfsg-1~nd10.10+1_all.deb Size: 972184 SHA256: 48cd04fec2110ce036d16fc32550296c817eef64f138a48b54456bb177ade3d0 SHA1: fe964cc057d4573c9e10663f8a9e2c78b4b69a80 MD5sum: 95d34f27e08151c595ef5e023ab56fe9 Description: cross-platform windowing and multimedia library This library provides an object-oriented programming interface for developing games and other visually-rich applications with Python. pyglet has virtually no external dependencies. For most applications and game requirements, pyglet needs nothing else besides Python, simplifying distribution and installation. It also handles multiple windows and fully aware of multi-monitor setups. . pyglet might be seen as an alternative to PyGame. Package: python-scikits-learn Source: scikit-learn Version: 0.5-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1112 Depends: python (>= 2.5), python-support (>= 0.90.0), python-numpy, python-scipy, python-scikits-learn-lib (>= 0.5-1~nd10.10+1) Recommends: python-nose, python-psyco, python-matplotlib, python-joblib (>= 0.4.5) Suggests: python-dap, python-scikits-optimization, python-scikits-learn-doc Provides: python2.6-scikits-learn Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python-scikits-learn_0.5-1~nd10.10+1_all.deb Size: 203450 SHA256: 6994b428f50c6e174c8ebbe53f047cb901a1939b2091d60695ac531cf1667950 SHA1: 2176a051eb3867a1dda96219faca01ce14dbff39 MD5sum: 83105b0472d6fc78e6df85d2644152b6 Description: Python modules for machine learning and data mining scikit-learn is a collection of Python modules relevant to machine/statistical learning and data mining. Non-exhaustive list of included functionality: - Gaussian Mixture Models - Manifold learning - kNN - SVM (via LIBSVM) Python-Version: 2.6 Package: python-scikits-learn-doc Source: scikit-learn Version: 0.5-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 6396 Depends: libjs-jquery Suggests: python-scikits-learn Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: doc Filename: pool/main/s/scikit-learn/python-scikits-learn-doc_0.5-1~nd10.10+1_all.deb Size: 3205264 SHA256: a2e80602b72ecc68962477e09293a8f23d0913c9a5f547dba91dc7ae67eac546 SHA1: 7beceb08670ad9e809920541b2787742fbaddc69 MD5sum: 0cbb673608d0b1850cb64043b4a45e82 Description: documentation and examples for scikit-learn This package contains documentation and example scripts for python-scikits-learn. Package: python-scikits-learn-lib Source: scikit-learn Version: 0.5-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 752 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.2.1), libsvm2, python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python-numpy Provides: python2.6-scikits-learn-lib Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python-scikits-learn-lib_0.5-1~nd10.10+1_amd64.deb Size: 255790 SHA256: 97fcd96de03d808d2f6222ec29cd9f4ab7ade61652950f7cdc3b794c346d29e1 SHA1: 429afa08a46e01710f930435fdcf01ad93e9e1a7 MD5sum: 1d937cbc7a3eb2562c5f36c1b5e86da6 Description: low-level implementations and bindings for scikits-learn This is an add-on package for python-scikits-learn. It provides low-level implementations and custom Python bindings for the LIBSVM library. Python-Version: 2.6 Package: python-sphinx Source: sphinx Version: 1.0.1-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4580 Depends: python (>= 2.4), python-support (>= 0.90.0), python-docutils (>= 0.5), python-pygments (>= 0.8), python-jinja2 (>= 2.2), libjs-jquery Recommends: python (>= 2.6) | python-simplejson, python-imaging Suggests: jsmath Homepage: http://sphinx.pocoo.org/ Priority: optional Section: python Filename: pool/main/s/sphinx/python-sphinx_1.0.1-1~nd10.10+1_all.deb Size: 1233508 SHA256: e5d101c4574a093267d4a65cc4838ddf81741164e8c6e498e42717ed804ad40f SHA1: e88a483cdc8e67acf308b87956dee74b4e6e92c3 MD5sum: 8b215a4eef0990392885ae8c7b64aa93 Description: tool for producing documentation for Python projects Sphinx is a tool for producing documentation for Python projects, using reStructuredText as markup language. . Sphinx features: * HTML, CHM, LaTeX output, * Cross-referencing source code, * Automatic indices, * Code highlighting, using Pygments, * Extensibility. Existing extensions: - automatic testing of code snippets, - including doctrings from Python modules. Package: sigviewer Version: 0.5.0-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1116 Depends: neurodebian-popularity-contest, libbiosig0, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgdf0, libqt4-xml (>= 4:4.5.3), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.6.1), libstdc++6 (>= 4.4.0) Homepage: http://sigviewer.sourceforge.net Priority: extra Section: science Filename: pool/main/s/sigviewer/sigviewer_0.5.0-1~nd10.10+1_amd64.deb Size: 455810 SHA256: 9a6d3ff082d9bfe67977eec10ac5f924aa7daab040f4e2778c881b68d7dd1e29 SHA1: 1f63deb262d22836684fe968442250b7a6d425ed MD5sum: fd1a9156b23646d6c34380a0009f06a3 Description: GUI viewer for biosignals such as EEG, EMG, and ECG SigViewer is a viewing and scoring software for biomedical signal data. It relies on biosig4c++ library which supports a number of data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://hci.tugraz.at/schloegl/biosig/TESTED . . Besides displaying biosignals, SigViewer supports creating annotations to select artifacts or specific events. Package: spm8-common Source: spm8 Version: 8.4010~dfsg.1-3 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 21124 Recommends: spm8-data, spm8-doc Priority: extra Section: science Filename: pool/main/s/spm8/spm8-common_8.4010~dfsg.1-3_all.deb Size: 10086746 SHA256: 420af58742ffd8d712777d84e1b5cab7f62ffa60cc53d3cac35747af68fd57c7 SHA1: 30c639e67be5083685f97306730b186ee4b2c063 MD5sum: 89daeb63df29035e31b49719d63eb4ba Description: analysis of brain imaging data sequences Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the platform-independent M-files. Package: spm8-data Source: spm8 Version: 8.4010~dfsg.1-3 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 73316 Priority: extra Section: science Filename: pool/main/s/spm8/spm8-data_8.4010~dfsg.1-3_all.deb Size: 52168426 SHA256: a33f373c13f9142a6d423af68ff01331166451c04e51192472cc1736190706bf SHA1: 4b9731f75628adf68a2e892314976c892bf0e9cb MD5sum: e5f7efb634ddadfc7f5387d930f62872 Description: data files for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provide the data files shipped with the SPM distribution, such as various stereotaxic brain space templates and EEG channel setups. Package: spm8-doc Source: spm8 Version: 8.4010~dfsg.1-3 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 11288 Priority: extra Section: doc Filename: pool/main/s/spm8/spm8-doc_8.4010~dfsg.1-3_all.deb Size: 10423480 SHA256: bc4fffabe5ca9a2080d9a2532ade99a53a6c634dddf0c74b2effb107c1c28bff SHA1: 24a099d5790918edb44830153cea6c45a2d6f206 MD5sum: 1bfc3e98c3e6d7026ceafa67d7182426 Description: manual for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the SPM manual in PDF format. Package: svgtune Version: 0.1.0-2 Architecture: all Maintainer: Yaroslav Halchenko Installed-Size: 64 Depends: python, python-lxml Suggests: inkscape Homepage: http://github.com/yarikoptic/svgtune Priority: optional Section: graphics Filename: pool/main/s/svgtune/svgtune_0.1.0-2_all.deb Size: 6680 SHA256: 69b4df1e0b4c247673265c7f5bb2b2ffe2209d783617bf7f6eadce86633f80e1 SHA1: bec339e4453c35a05a616deef6769a6f2ad2d00d MD5sum: ef6797498477a73f930ad9bc0db3ba73 Description: tool to generate a set of .svg files out of a single .svg file svgtune is just a little helper to generate a set of .svg files out of a single .svg file, by tuning respective groups/layers visibility, transparency or anything else. . It might come very handy for generation of incremental figures to be embedded into the presentation in any format which inkscape could render using original .svg file (e.g. pdf, png). Package: voxbo Version: 1.8.5~svn1222-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 9916 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libfontconfig1 (>= 2.8.0), libfreetype6 (>= 2.2.1), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), libpng12-0 (>= 1.2.13-4), libqt4-network (>= 4:4.5.3), libqt4-qt3support (>= 4:4.5.3), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.6.1), libstdc++6 (>= 4.4.0), libx11-6, libxext6, libxi6, libxrender1, zlib1g (>= 1:1.1.4) Suggests: mni-colin27-nifti, matlab-spm8 Homepage: http://www.voxbo.org Priority: extra Section: science Filename: pool/main/v/voxbo/voxbo_1.8.5~svn1222-1~nd10.10+1_amd64.deb Size: 3639028 SHA256: 4d1f298292d0d8669bd18e34ec1ca2a12f805e8fa47fa4611feb35b23b1ece24 SHA1: f9cb5edf74c5a016e83c8be194bbfb2246269bb4 MD5sum: b7e90b1660c43cec4e7794447b85ec01 Description: processing, statistical analysis, and display of brain imaging data This is a toolkit for analysis of functional neuroimaging (chiefly fMRI) experiments and voxel-based lesion-behavior mapping. VoxBo supports the modified GLM (for autocorrelated data), as well as the standard GLM for non-autocorrelated data. The toolkit is designed to be interoperable with AFNI, FSL, SPM and others.