Package: afni Version: 0.20101222~dfsg.1-2~nd10.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 25488 Depends: neurodebian-popularity-contest, afni-common (= 0.20101222~dfsg.1-2~nd10.10+1), tcsh, gifsicle, libjpeg-progs, freeglut3, libc6 (>= 2.11), libf2c2, libgiftiio0, libgl1-mesa-glx | libgl1, libglib2.0-0 (>= 2.12.0), libglu1-mesa | libglu1, libglw1-mesa | libglw1, libgomp1 (>= 4.2.1), libgsl0ldbl (>= 1.9), libgts-0.7-5 (>= 0.7.6), libice6 (>= 1:1.0.0), libmotif3, libnetcdf6, libnifti1 (>> 1.1.0-2), libsm6, libvolpack1, libx11-6, libxext6, libxi6, libxmu6, libxt6 Recommends: nifti-bin, bzip2, ffmpeg, netpbm, python Suggests: r-base Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni_0.20101222~dfsg.1-2~nd10.10+1_i386.deb Size: 9382946 SHA256: 4cfd792a45acd3e5f663feb2c15d474c307e7956b0b707c851c23edfca119fd4 SHA1: 237875e13e7e59eb64f5be9cc668f9bf3d3849b1 MD5sum: 88b92d72a31ec9df67a034ad4abf3fd8 Description: toolkit for analyzing and visualizing functional MRI data AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . In addition to its own format AFNI understands the NIfTI format and is therefore easily usable in combination with FSL and Freesurfer. Package: afni-common Source: afni Version: 0.20101222~dfsg.1-2~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8572 Depends: neurodebian-popularity-contest, python, tcsh Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-common_0.20101222~dfsg.1-2~nd10.10+1_all.deb Size: 4625258 SHA256: 64625918e67d0acaccb7c1e041041afda595791d6a2f318d689ee1a8ec23c10f SHA1: a9f5102119edde98123cf2550f540b47987f8851 MD5sum: 315b00e00d2d88bfc0e415484fcdd927 Description: miscellaneous scripts and data files for AFNI This package provides the required architecture independent parts of AFNI. Package: afni-dev Source: afni Version: 0.20101222~dfsg.1-2~nd10.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 11100 Depends: neurodebian-popularity-contest Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-dev_0.20101222~dfsg.1-2~nd10.10+1_i386.deb Size: 3492028 SHA256: b32e82cbc0a52be681f6731eb460a013639d3e4b01e19d14fa0c950a769c01d7 SHA1: eaa4dd5ffd5b98f282620a878446a431d43f7f92 MD5sum: 951742a8a19d13f5cc807fd3983197b3 Description: header and static libraries for AFNI plugin development AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides the necessary libraries and header files for AFNI plugin development. Package: jist Version: 2.0.20100907.dfsg1-1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 40092 Depends: mipav, openjdk-6-jre | java6-runtime, libcommons-cli-java (>= 1.2), libdrmaa-java, libjgraph-java (>= 5.10.1.2), libxom-java (>= 1.2.1), libxpp3-java (>= 1.1.4c), libxstream-java (>= 1.3.1) Homepage: http://www.nitrc.org/projects/jist/ Priority: extra Section: contrib/science Filename: pool/contrib/j/jist/jist_2.0.20100907.dfsg1-1_all.deb Size: 9020652 SHA256: b4059b70c695e9caba46e8ea1cca6482819c740b2d91b56a569a11f6c7fc60ba SHA1: 1f898a03ea355a710e23cc79ff3b5d4c63295852 MD5sum: 800acee273ebe4a3bd78c49d32188556 Description: Java Image Science Toolkit Java Image Science Toolkit (JIST) provides a native Java-based imaging processing environment similar to the ITK/VTK paradigm. Initially developed as an extension to MIPAV (CIT, NIH, Bethesda, MD), the JIST processing infrastructure provides automated GUI generation for application plug-ins, graphical layout tools, and command line interfaces. Package: matlab-gdf Source: libgdf Version: 0.1.1~svn62-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 212 Depends: neurodebian-popularity-contest, libgdf-dev (>= 0.1.1~svn62-1~nd10.10+1) Recommends: matlab Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: contrib/science Filename: pool/contrib/libg/libgdf/matlab-gdf_0.1.1~svn62-1~nd10.10+1_all.deb Size: 21108 SHA256: 382889990a43925cb7715c70a36e8e3ef83369dc94afb4d57ab7912b857c1011 SHA1: e71ed959c99c56444aa2877dbe8391e2005cd4bb MD5sum: 4d75a92ef4e8eddf709cb54a97351f2c Description: IO library for the GDF -- Matlab interface GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package builds Matlab bindings for GDF at installation time. Note that this package depends on Matlab -- a commercial software that needs to be obtain and installed separately. Package: matlab-spm8 Source: spm8 Version: 8.4010~dfsg.1-4~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1428 Depends: neurodebian-popularity-contest, matlab-support, spm8-common (= 8.4010~dfsg.1-4~nd10.10+1), make Provides: spm, spm8 Priority: extra Section: contrib/science Filename: pool/contrib/s/spm8/matlab-spm8_8.4010~dfsg.1-4~nd10.10+1_all.deb Size: 229252 SHA256: e2108bc54849083b69e230cb60636b0c3f104cf77a2da8714dff46db18efba18 SHA1: ea7140245a95c99df5907a173b7e73fce1b5de73 MD5sum: b71a8c1ee0b3ea53637bf4b5454931d6 Description: analysis of brain imaging data sequences for Matlab Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides SPM to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtain and installed separately. Package: matlab-support Version: 0.0.14~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 140 Depends: neurodebian-popularity-contest, debconf (>= 1.3.22) | cdebconf (>= 0.43), debconf (>= 0.5) | debconf-2.0, libxp6, sudo Recommends: libstdc++6-4.4-dev | libstdc++-dev Conflicts: matlab (<= 0.0.14~) Replaces: matlab (<= 0.0.14~) Priority: optional Section: contrib/devel Filename: pool/contrib/m/matlab-support/matlab-support_0.0.14~nd10.10+1_all.deb Size: 15764 SHA256: 302e9c5c8bb4febccaee482bbffe31e56669d938985b26922f36f342a608ac8f SHA1: 96d6707eb0de58cc7875a1fd57bf1ccb674c7b0f MD5sum: a542c6aa6d1aaa28c6d0672c0230e743 Description: integrate local Matlab installations into the Debian system This package does NOT provide Matlab (TM). It merely helps sysadmins integrate local installations in the Debian system to handle this proprietary software in a more coherent way. Moreover, this package can be used as a runtime dependency for packages that install Matlab code and, for example, need to compile MEX extensions. . One or more Matlab installations can be registered with Debian's alternatives system, and a helper utility to build MEX extensions is provided. All configuration is conveniently done via debconf.