Package: ants Version: 1.9.2+svn680.dfsg-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 38212 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libinsighttoolkit3.18, libstdc++6 (>= 4.4.0) Suggests: fsl, gridengine-client Homepage: http://www.picsl.upenn.edu/ANTS/ Priority: extra Section: science Filename: pool/main/a/ants/ants_1.9.2+svn680.dfsg-1~nd10.10+1_amd64.deb Size: 11326468 SHA256: a4806d17a2d77578a6a8357d428b492f79fe46e24a684ad18414177f9bbba264 SHA1: cbd5567bc66694cca62b6778b785612bf501d9ed MD5sum: 5cb2c5d85e93d091fe74f38b363eea10 Description: advanced normalization tools for brain and image analysis Advanced Normalization Tools (ANTS) is an ITK-based suite of normalization, segmentation and template-building tools for quantitative morphometric analysis. Many of the ANTS registration tools are diffeomorphic, but deformation (elastic and BSpline) transformations are available. Unique components of ANTS include multivariate similarity metrics, landmark guidance, the ability to use label images to guide the mapping and both greedy and space-time optimal implementations of diffeomorphisms. The symmetric normalization (SyN) strategy is a part of the ANTS toolkit as is directly manipulated free form deformation (DMFFD). Package: autotools-dev Version: 20100122.1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 216 Depends: neurodebian-popularity-contest Enhances: cdbs, debhelper Homepage: http://savannah.gnu.org/projects/config/ Priority: optional Section: devel Filename: pool/main/a/autotools-dev/autotools-dev_20100122.1~nd10.10+1_all.deb Size: 73000 SHA256: 2e4624e33e50c6bcdb26ab691a4cb339ee5d9efb514cb80d1ed34f66a224c1f3 SHA1: 4e4eeda943b73962c622a9d7222ec12799d9ad66 MD5sum: 933c51b7e10a71382d16980f9246f2a5 Description: Update infrastructure for config.{guess,sub} files This package installs an up-to-date version of config.guess and config.sub, used by the automake and libtool packages. It provides the canonical copy of those files for other packages as well. . It also documents in /usr/share/doc/autotools-dev/README.Debian.gz best practices and guidelines for using autoconf, automake and friends on Debian packages. This is a must-read for any developers packaging software that uses the GNU autotools, or GNU gettext. . Additionally this package provides seamless integration into Debhelper or CDBS, allowing maintainers to easily update config.{guess,sub} files in their packages. Package: biosig-tools Source: biosig4c++ Version: 0.96.3+svn2677-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 48 Depends: neurodebian-popularity-contest, libbiosig0, libc6 (>= 2.4), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: science Filename: pool/main/b/biosig4c++/biosig-tools_0.96.3+svn2677-1~nd10.10+1_amd64.deb Size: 13800 SHA256: a1db33df32adb8d90eb17c35201df81a6dbb1d834537b5e46b1b774a1cf64c79 SHA1: c4f84d4f66daeb64438276ccc0c22f7319f42711 MD5sum: 8afddeae8201279ba7cc3fd08dbb3b95 Description: format conversion tools for biomedical data formats Based on BioSig library, this package provides command line tools, such as . - save2gdf: converter between different file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF, BDF, CWFB. save2gdf can be also used to upload or retrieve data from a bscs server. Package: caret Version: 5.6.2~dfsg.1-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 19224 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libgomp1 (>= 4.2.1), libminc2-1, libqt4-network (>= 4:4.5.3), libqt4-opengl (>= 4:4.5.3), libqt4-xml (>= 4:4.5.3), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.5.3), libqwt5-qt4, libstdc++6 (>= 4.4.0), libvtk5.4, zlib1g (>= 1:1.2.3.3.dfsg) Recommends: qt-assistant-compat Suggests: caret-data (>= 5.6.2~dfsg.1~) Homepage: http://brainvis.wustl.edu/wiki/index.php/Caret:About Priority: optional Section: science Filename: pool/main/c/caret/caret_5.6.2~dfsg.1-2~nd10.10+1_amd64.deb Size: 7408254 SHA256: bbd2c9efd6f0c9600051769d055fcd4f067ae96ebbd155296a36c90c9f29555d SHA1: 405715d02593088b1e47b2b466ead430936cbb70 MD5sum: 33bb239b5467583ca0d1917cc1db8b83 Description: Computerized Anatomical Reconstruction and Editing Toolkit This software allows for creating, viewing and manipulating surface reconstructions of the cerebral and cerebellar cortex, viewing volumes and for displaying experimental data on the surfaces and volumes. While Caret is primarily a GUI application with 'caret_command' there is also a versatile command line tool, that allows access to a substantial proportion of Caret's functionality. . Caret can download and use stereotaxic atlases (human, monkey, mouse and rat) from an open online database. . Some functionality of Caret is only available when additional data files, provided by the caret-data package, are available. This includes: . - Map volumes to surface via PALS atlas - Multi-resolution morphing - Projection of foci via PALS atlas - Surface-based registration - Surface flattening . Currently the caret-data package is only available from the NeuroDebian repository. Please see http://neuro.debian.net for more imformation. Package: classads Version: 1.0.10-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 88 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libclassad1 (= 1.0.10-2~nd10.10+1), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.cs.wisc.edu/condor/classad Priority: extra Section: misc Filename: pool/main/c/classads/classads_1.0.10-2~nd10.10+1_amd64.deb Size: 31164 SHA256: f3e921dae82a91b02923a80d8968e23e59e1506cfad99a3d5a8cec04ba6f110f SHA1: 1eb7eb110bcda7b6ff4ecc97c37926d80c350394 MD5sum: 3685b73b6a5402f789443d908124b33e Description: Condor's classad utilities A classad (classified ad) is a mapping from attribute names to expressions. In the simplest cases, the expressions are simple constants (integer, floating point, or string), thus a form of property list. Attribute expressions can also be more complicated. There is a protocol for evaluating an attribute expression of a classad vis a vis another ad. Two classads match if each ad has attribute requirements that evaluate to true in the context of the other ad. Classad matching is used by the Condor central manager to determine the compatibility of jobs and workstations where they may be run. . This package provides command line tools to manipulate, test and evaluate classads. Package: condor Version: 7.6.0-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 11724 Depends: neurodebian-popularity-contest, debconf (>= 0.5) | debconf-2.0, libc6 (>= 2.8), libclassad1, libcomerr2 (>= 1.01), libcurl3 (>= 7.16.2-1), libexpat1 (>= 1.95.8), libgcc1 (>= 1:4.1.1), libglobus-callout0, libglobus-common0, libglobus-ftp-client2, libglobus-ftp-control1, libglobus-gass-transfer2, libglobus-gram-client3, libglobus-gram-protocol3, libglobus-gsi-callback0, libglobus-gsi-cert-utils0, libglobus-gsi-credential1, libglobus-gsi-openssl-error0, libglobus-gsi-proxy-core0, libglobus-gsi-proxy-ssl1, libglobus-gsi-sysconfig1, libglobus-gss-assist3, libglobus-gssapi-error2, libglobus-gssapi-gsi4, libglobus-io3, libglobus-openssl-module0, libglobus-rsl2, libglobus-xio0, libk5crypto3 (>= 1.6.dfsg.2), libkrb5-3 (>= 1.7dfsg), libkrb5support0 (>= 1.7dfsg~beta2), libldap-2.4-2 (>= 2.4.7), libltdl7 (>= 2.2.6b), libpcre3 (>= 7.7), libssl0.9.8 (>= 0.9.8m-1), libstdc++6 (>= 4.4.0), libvirt0 (>= 0.5.0), libxml2 (>= 2.6.27), zlib1g (>= 1:1.1.4), adduser Priority: extra Section: science Filename: pool/main/c/condor/condor_7.6.0-1~nd10.10+1_amd64.deb Size: 4376814 SHA256: 9de49c6de51e152649a8518cc13a4a9835b7bb09211be2ee0832be736ff7a42c SHA1: 2543d03c9091bfd007e5b5bb3c7a790eb7b2a53e MD5sum: 93185c6c561f42f9bce27af12edc4a93 Description: workload management system Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor, Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing system, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . The Debian package uses Debconf to determine an appropriate initial configuration for a machine that shall join an existing Condor pool, and moreover, allows creating a "Personal" (single machine) Condor pool automatically. Package: condor-dbg Source: condor Version: 7.6.0-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 36208 Depends: neurodebian-popularity-contest, condor (= 7.6.0-1~nd10.10+1) Priority: extra Section: debug Filename: pool/main/c/condor/condor-dbg_7.6.0-1~nd10.10+1_amd64.deb Size: 12814932 SHA256: 2adcc505c5d5f5a440de1dcd43f0ff9b32a40081b8ebb3a25ae7d7166575954b SHA1: 4406ec1050ee48825e820b1c1393655927051634 MD5sum: 2c27a1f0bf5b3cdaf7201693a2832750 Description: debugging symbols for Condor Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor, Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing system, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package provides the debugging symbols for Condor. Package: condor-doc Source: condor Version: 7.6.0-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 11748 Depends: neurodebian-popularity-contest Priority: extra Section: doc Filename: pool/main/c/condor/condor-doc_7.6.0-1~nd10.10+1_all.deb Size: 5953010 SHA256: 45c6cdbdc88ffe31d29961df55384146444dee125bb1087f7e151b4bf9cbac10 SHA1: 668a3080a759a3114549bd7155cb9bea859793db MD5sum: e50d27265d851f4c3da3312cd984b901 Description: documentation for Condor Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor, Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing system, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package provides Condor's documentation in HTML and PDF format, as well as configuration and other examples. Package: coop-computing-tools Source: cctools Version: 3.3.2-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2780 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libfuse2 (>= 2.8.1), libglobus-common0, libglobus-gss-assist3, libglobus-gssapi-gsi4, libkrb5-3 (>= 1.6.dfsg.2), libstdc++6 (>= 4.1.1) Suggests: coop-computing-tools-doc, condor Homepage: http://nd.edu/~ccl/software/ Priority: extra Section: utils Filename: pool/main/c/cctools/coop-computing-tools_3.3.2-1~nd10.10+1_amd64.deb Size: 1119660 SHA256: e7333a880258651ccda096b10e8e96cc555dccda459ca7f6f7f733b6f54c3561 SHA1: 52d10b6dcc925711d9d05c03adf0da1cea3f1e2b MD5sum: 52c9cc4882d3c7fd92bbf64988d001bd Description: cooperative computing tools This is a collection of software that help users to share resources in a complex, heterogeneous, and unreliable computing environment. This includes: . * Chirp: A personal filesystem and I/O protocol that allows unprivileged users to share space securely, efficiently, and conveniently. When combined with Parrot, Chirp allows users to create custom wide-area distributed filesystems. * Parrot: A transparent user-level virtual filesystem that allows any ordinary program to be attached to a remote storage device such as an FTP server or a Chirp server. * Makeflow: A workflow system for parallel and distributed computing that uses a language very similar to Make. * Work Queue: A system and API for building master-worker style programs that scale up to thousands of processors. * All Pairs: A computational abstraction for running very large Cartesian products. * Wavefront: A computational asbtraction for running very large dynamic programming problems. * The Fault Tolerant Shell: A high-level programming language that allows users to combine the ease of shell scripting, the power of distributed programming, and the precision of compiled languages. Basically, parallel programming and exception handling for scripts. Package: coop-computing-tools-dev Source: cctools Version: 3.3.2-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1092 Depends: neurodebian-popularity-contest Homepage: http://nd.edu/~ccl/software/ Priority: extra Section: libs Filename: pool/main/c/cctools/coop-computing-tools-dev_3.3.2-1~nd10.10+1_amd64.deb Size: 228882 SHA256: 9612247064a806bdecb7f50e6d4863bb0e5f7944e26a8d4c2570c9b9330a4126 SHA1: 56f2404dd2046dbd7142744aac95bea34025d943 MD5sum: 0898dca00ec8cd0546c552c32c421925 Description: libraries and header files for coop-computing-tools These tools are a collection of software that help users to share resources in a complex, heterogeneous, and unreliable computing environment. . This package provides static libraries and header files for development. Package: coop-computing-tools-doc Source: cctools Version: 3.3.2-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2404 Depends: neurodebian-popularity-contest Homepage: http://nd.edu/~ccl/software/ Priority: extra Section: doc Filename: pool/main/c/cctools/coop-computing-tools-doc_3.3.2-1~nd10.10+1_all.deb Size: 261126 SHA256: f9464ccc826b1b7cef9a04eba75ec7e0e271d3476c1c4fc5915b052b4dba5d0f SHA1: 86120214e98382c5476b4924fdb9a8c7ed6ef86e MD5sum: dfd282a0b1e59bc5ffb4f4dcadbd5012 Description: documentation for coop-computing-tools These tools are a collection of software that help users to share resources in a complex, heterogeneous, and unreliable computing environment. . This package provides the documentation (manual and API reference) in HTML format. Package: cython Version: 0.13-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 3680 Depends: python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python2.6, libc6 (>= 2.3) Suggests: gcc Homepage: http://cython.org/ Priority: optional Section: python Filename: pool/main/c/cython/cython_0.13-1~nd10.10+1_amd64.deb Size: 865752 SHA256: 2dcdbac1a90314879ef382ff5fa4ccf87630d47af9a78a4d2d2c255df192d884 SHA1: 0e747b0c464824debec67f456d27395da1616fea MD5sum: e033c32d40dd528dc4cfe07e08efa7f0 Description: C-Extensions for Python Cython is a language that makes writing C extensions for the Python language as easy as Python itself. Cython is based on the well-known Pyrex, but supports more cutting edge functionality and optimizations. . The Cython language is very close to the Python language, but Cython additionally supports calling C functions and declaring C types on variables and class attributes. This allows the compiler to generate very efficient C code from Cython code. . This makes Cython the ideal language for wrapping for external C libraries, and for fast C modules that speed up the execution of Python code. Python-Version: 2.6 Package: cython-dbg Source: cython Version: 0.13-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 5324 Depends: python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), libc6 (>= 2.3), cython (= 0.13-1~nd10.10+1) Suggests: gcc Homepage: http://cython.org/ Priority: extra Section: debug Filename: pool/main/c/cython/cython-dbg_0.13-1~nd10.10+1_amd64.deb Size: 1711982 SHA256: 0e22c074117ed14ab06670c17f8657bc20e8b7c881cc7048dbdacb071846be55 SHA1: 9c19b4e7b7e21c3a2c5783a72db0bf2ccb3320c5 MD5sum: 8d5323e51fb18f0fdc14809311b14ae0 Description: C-Extensions for Python (Debug Build of Cython) This package contains Cython libraries built against versions of Python configured with --pydebug. Python-Version: 2.6 Package: dicomnifti Version: 2.28.14-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 524 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libnifti1 (>> 1.1.0-2), libstdc++6 (>= 4.4.0) Homepage: http://cbi.nyu.edu/software/dinifti.php Priority: optional Section: science Filename: pool/main/d/dicomnifti/dicomnifti_2.28.14-2~maverick.nd1_amd64.deb Size: 158698 SHA256: 9de31342677564bbd2c46db4c101360ba62dc0859527112e462a106307bcab65 SHA1: bfd0234348776fde2a5f160fe8ee5dd7b30d1f84 MD5sum: 8bd2a7a3900e37490b2c03a1ea9b3083 Description: converts DICOM files into the NIfTI format The dinifti program converts MRI images stored in DICOM format to NIfTI format. The NIfTI format is thought to be the new standard image format for medical imaging and can be used with for example with FSL, AFNI, SPM, Caret or Freesurfer. . dinifti converts single files, but also supports fully automatic batch conversions of complete dicomdirs. Additionally, converted NIfTI files can be properly named, using image series information from the DICOM files. Package: dmtcp Version: 1.2.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 3676 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.2.1) Homepage: http://dmtcp.sourceforge.net Priority: optional Section: utils Filename: pool/main/d/dmtcp/dmtcp_1.2.1-1~nd10.10+1_amd64.deb Size: 1638962 SHA256: 6ee4b9b67f339757dcbb66a0c827993f89cc88293c2b97ab3b229726f841b427 SHA1: 9948cc612b06c47b10122f5b93462d705942ca74 MD5sum: ed4fc1b750bae8039cfba8c68ffad7a2 Description: Checkpoint/Restart functionality for Linux processes DMTCP (Distributed MultiThreaded Checkpointing) is a tool to transparently checkpointing the state of an arbitrary group of programs including multi-threaded and distributed computations. It operates directly on the user binary executable, with no Linux kernel modules or other kernel mods. . Among the applications supported by DMTCP are OpenMPI, MATLAB, Python, Perl, and many programming languages and shell scripting languages. DMTCP also supports GNU screen sessions, including vim/cscope and emacs. With the use of TightVNC, it can also checkpoint and restart X-Windows applications, as long as they do not use extensions (e.g.: no OpenGL, no video). . This package contains DMTCP binaries. Package: dmtcp-dbg Source: dmtcp Version: 1.2.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 21244 Depends: neurodebian-popularity-contest, dmtcp Homepage: http://dmtcp.sourceforge.net Priority: extra Section: debug Filename: pool/main/d/dmtcp/dmtcp-dbg_1.2.1-1~nd10.10+1_amd64.deb Size: 6379258 SHA256: 2b8e52aac3af94860de0fd6b2feb07dc0055d6cdb3a5cf6a24522db4523562d4 SHA1: bad9e63450fcbd4dc6fa9c42241c2905a346b170 MD5sum: 8241ded9b603655ce0caa31d9cff50ae Description: Debug package for dmtcp DMTCP (Distributed MultiThreaded Checkpointing) is a tool to transparently checkpointing the state of an arbitrary group of programs including multi-threaded and distributed computations. It operates directly on the user binary executable, with no Linux kernel modules or other kernel mods. . Among the applications supported by DMTCP are OpenMPI, MATLAB, Python, Perl, and many programming languages and shell scripting languages. DMTCP also supports GNU screen sessions, including vim/cscope and emacs. With the use of TightVNC, it can also checkpoint and restart X-Windows applications, as long as they do not use extensions (e.g.: no OpenGL, no video). . This package contains debugging symbols for DMTCP. Package: eatmydata Source: libeatmydata Version: 26-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 28 Depends: neurodebian-popularity-contest, libc6 (>= 2.2.5) Provides: libeatmydata Homepage: https://launchpad.net/libeatmydata Priority: optional Section: utils Filename: pool/main/libe/libeatmydata/eatmydata_26-2~nd10.10+1_amd64.deb Size: 8170 SHA256: 68a067f3f6568320b30de47135a05791d0503f9ba4a53118baa2f5acf5c5daeb SHA1: 7f05d2bbae1138d94ba56a988d676e8e726b3543 MD5sum: 77af09647b3176efac4e22bc8dd44c81 Description: library and utilities designed to disable fsync and friends This package contains a small LD_PRELOAD library (libeatmydata) and a couple of helper utilities designed to transparently disable fsync and friends (like open(O_SYNC)). This has two side-effects: making software that writes data safely to disk a lot quicker and making this software no longer crash safe. . You will find eatmydata useful if particular software calls fsync(), sync() etc. frequently but the data it stores is not that valuable to you and you may afford losing it in case of system crash. Data-to-disk synchronization calls are typically very slow on modern file systems and their extensive usage might slow down software significantly. It does not make sense to accept such a hit in performance if data being manipulated is not very important. . On the other hand, do not use eatmydata when you care about what software stores or it manipulates important components of your system. The library is called libEAT-MY-DATA for a reason. Package: fail2ban Version: 0.8.4+svn20110323-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 596 Depends: neurodebian-popularity-contest, python (>= 2.4), python-central (>= 0.6.11), lsb-base (>= 2.0-7) Recommends: iptables, whois Suggests: python-gamin, mailx Homepage: http://www.fail2ban.org Priority: optional Section: net Filename: pool/main/f/fail2ban/fail2ban_0.8.4+svn20110323-1~nd10.10+1_all.deb Size: 97968 SHA256: f8fb14c62e06cdd270edecbba55185610ee182a284467571086d8bb846ee0ca0 SHA1: ab194e62672c513f43d29d9e2c16823e15b33048 MD5sum: 95b6a2d520b238d58fd25367aced3c7d Description: ban hosts that cause multiple authentication errors Fail2ban monitors log files (e.g. /var/log/auth.log, /var/log/apache/access.log) and temporarily or persistently bans failure-prone addresses by updating existing firewall rules. Fail2ban allows easy specification of different actions to be taken such as to ban an IP using iptables or hostsdeny rules, or simply to send a notification email. . By default, it comes with filter expressions for various services (sshd, apache, qmail, proftpd, sasl etc.) but configuration can be easily extended for monitoring any other text file. All filters and actions are given in the config files, thus fail2ban can be adopted to be used with a variety of files and firewalls. Python-Version: current, >= 2.4 Package: freenect Source: libfreenect Version: 1:0.0.1+20101211+1-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 32 Depends: neurodebian-popularity-contest, libfreenect-demos, libfreenect-dev, libfreenect0.0 Homepage: http://openkinect.org/ Priority: extra Section: libs Filename: pool/main/libf/libfreenect/freenect_0.0.1+20101211+1-2~nd10.10+1_amd64.deb Size: 1578 SHA256: 889392f92ec6b3dd6d1017cecfa379175b06f45f649fa4b9de7390ef4bfb161d SHA1: a4497980f86a194bd199e5a90ad03df786601f84 MD5sum: a10d1e12078cb7871670ee5704d0ffa2 Description: library for accessing Kinect USB camera -- meta package libfreenect is the core library for accessing the Microsoft Kinect USB camera. . This is the meta package to install all components of the project. Package: fslview Version: 3.1.8+4.1.6-2~maverick.nd2 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 4136 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libnewmat10ldbl, libnifti2, libqt3-mt (>= 3:3.3.8-b), libqwt4c2, libstdc++6 (>= 4.4.0), libvtk5.4, libvtk5.4-qt3 Recommends: fslview-doc Suggests: fsl-atlases Conflicts: fsl-fslview Replaces: fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/fslview Priority: optional Section: science Filename: pool/main/f/fslview/fslview_3.1.8+4.1.6-2~maverick.nd2_amd64.deb Size: 1511708 SHA256: 7617b502940dd1d0dcd8b8d409e2b71554b0fbbf2ef01ed26aa95556b8cf653e SHA1: d9145e95a4887b0a05bc363de080969d7a9f130d MD5sum: 4bc78a17396b1e4798ab64fdeced84f5 Description: viewer for (f)MRI and DTI data This package provides a viewer for 3d and 4d MRI data as well as DTI images. FSLView is able to display ANALYZE and NIFTI files. The viewer supports multiple 2d viewing modes (orthogonal, lightbox or single slices), but also 3d volume rendering. Additionally FSLView is able to visualize timeseries and can overlay metrical and stereotaxic atlas data. . FSLView is part of FSL. Package: fslview-doc Source: fslview Version: 3.1.8+4.1.6-2~maverick.nd2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 3216 Depends: qt3-assistant Homepage: http://www.fmrib.ox.ac.uk/fsl/fslview Priority: optional Section: doc Filename: pool/main/f/fslview/fslview-doc_3.1.8+4.1.6-2~maverick.nd2_all.deb Size: 2378976 SHA256: f86a19e226efeeb0c052522258b201d7f6c822e4bd9f0e0816a75daa0778f782 SHA1: 7cf0703841a0c9fb0338253f749f6b668671db08 MD5sum: bd2d711aef575e4963a60637ae6ffc0b Description: Documentation for FSLView This package provides the online documentation for FSLView. . FSLView is part of FSL. Package: gdf-tools Source: libgdf Version: 0.1.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 116 Depends: neurodebian-popularity-contest, libboost-filesystem1.42.0 (>= 1.42.0-1), libboost-program-options1.42.0 (>= 1.42.0-1), libboost-system1.42.0 (>= 1.42.0-1), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgdf0, libstdc++6 (>= 4.4.0) Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: utils Filename: pool/main/libg/libgdf/gdf-tools_0.1.1-1~nd10.10+1_amd64.deb Size: 38832 SHA256: 78a11b37b58b4e6c27f623d8244141bbb738955729d98931cd6b6b4bfd9f0cee SHA1: d822fdf40a703d7253cbef0303c11283d51e798e MD5sum: 8b4faa76b96aea7deeca6897cb1313b0 Description: IO library for the GDF -- helper tools GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides the tool shipped with the library (gdf_merger). Package: gifti-bin Source: gifticlib Version: 1.0.9-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 128 Depends: libc6 (>= 2.3.4), libexpat1 (>= 1.95.8), libgiftiio0, libnifti1 (>> 1.1.0-2), zlib1g (>= 1:1.1.4) Homepage: http://www.nitrc.org/projects/gifti Priority: optional Section: utils Filename: pool/main/g/gifticlib/gifti-bin_1.0.9-1~maverick.nd1_amd64.deb Size: 29248 SHA256: 0e3f17a174bdf3fbc004c4c8b3fea6b1de90d5e745355e9907eecccc3c45aa79 SHA1: 5a1f62520a7089fc0f7779a6aad302eb8e8623f9 MD5sum: 371cc7de70de99fd19a3b4aef2fb0940 Description: tools shipped with the GIFTI library GIFTI is an XML-based file format for cortical surface data. This reference IO implementation is developed by the Neuroimaging Informatics Technology Initiative (NIfTI). . This package provides the tools that are shipped with the library (gifti_tool and gifti_test). Package: itksnap Version: 2.1.4-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 8592 Depends: libc6 (>= 2.4), libfltk1.1 (>= 1.1.8~rc1), libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libinsighttoolkit3.18, libstdc++6 (>= 4.4.0), libvtk5.4 Homepage: http://www.itksnap.org Priority: extra Section: science Filename: pool/main/i/itksnap/itksnap_2.1.4-1~nd10.10+1_amd64.deb Size: 3673860 SHA256: a79264a12d4f26931e648f643516ab9d0cc6a25b532010e341fa974afcf5f508 SHA1: 7f5a6e79ec0a526c58cc5468f8349cb265d02833 MD5sum: 4da72a2d0625b05005531ffee8a4276f Description: semi-automatic segmentation of structures in 3D images SNAP provides semi-automatic segmentation of structures in medical images (e.g. magnetic resonance images of the brain) using active contour methods, as well as manual delineation and image navigation. Noteworthy features are: . * Linked cursor for seamless 3D navigation * Manual segmentation in three orthogonal planes at once * Support for many different 3D image formats, including NIfTI * Support for concurrent, linked viewing and segmentation of multiple images * Limited support for color images (e.g., diffusion tensor maps) * 3D cut-plane tool for fast post-processing of segmentation results Package: libbiosig-dev Source: biosig4c++ Version: 0.96.3+svn2677-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1608 Depends: neurodebian-popularity-contest, libbiosig0 (= 0.96.3+svn2677-1~nd10.10+1) Homepage: http://biosig.sf.net/ Priority: extra Section: libdevel Filename: pool/main/b/biosig4c++/libbiosig-dev_0.96.3+svn2677-1~nd10.10+1_amd64.deb Size: 389824 SHA256: 431add5b2a9fe30f5af8c894492467071510f22dd48177b603846f0aab5909c1 SHA1: 01248756ad8aba36b4a57f71d8c9138a8c94c7b0 MD5sum: f140bb53dd481d5dadb12e17bae425ea Description: I/O library for biomedical data - development files BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED . . This package provides header files and static library. Package: libbiosig0 Source: biosig4c++ Version: 0.96.3+svn2677-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 880 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.2.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: libs Filename: pool/main/b/biosig4c++/libbiosig0_0.96.3+svn2677-1~nd10.10+1_amd64.deb Size: 309662 SHA256: 440d0c6ba877f2db38c821226fdfa37c675709c07acea00d78325f1089f2b410 SHA1: e0d2409745b8340b788e6070ac020c49ec44798e MD5sum: 46881033b715d70fc6ec85781fdc9628 Description: I/O library for biomedical data - dynamic library BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED . . This package provides dynamic library. Package: libbiosig0-dbg Source: biosig4c++ Version: 0.96.3+svn2677-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 220 Depends: neurodebian-popularity-contest, libbiosig0 (= 0.96.3+svn2677-1~nd10.10+1) Homepage: http://biosig.sf.net/ Priority: extra Section: debug Filename: pool/main/b/biosig4c++/libbiosig0-dbg_0.96.3+svn2677-1~nd10.10+1_amd64.deb Size: 57474 SHA256: 0c4ca86ba651fcef3b416c5881221b5e9744ca0a7b8a9630890e219b025effa3 SHA1: f73bd4b9832ef348d0cd2134de3213c2861ab077 MD5sum: f743fe552b3a4e5d9ab7f55199389218 Description: I/O library for biomedical data - debug symbols BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED . . This package provides debug symbols. Package: libclassad-dev Source: classads Version: 1.0.10-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2188 Depends: neurodebian-popularity-contest, libclassad1 (= 1.0.10-2~nd10.10+1) Conflicts: libclassad0-dev Replaces: libclassad0-dev Homepage: http://www.cs.wisc.edu/condor/classad Priority: extra Section: libdevel Filename: pool/main/c/classads/libclassad-dev_1.0.10-2~nd10.10+1_amd64.deb Size: 571248 SHA256: 1ac258222ad7bee4066203b3f0c022f41e72be68497c5de88fc510eadb2537c7 SHA1: ec7f1c0895aabce6c19abb811aab9b349b36e711 MD5sum: 26cb9dd127a53571189d5638f83dadcf Description: library for Condor's classads expression language (development) A classad (classified ad) is a mapping from attribute names to expressions. In the simplest cases, the expressions are simple constants (integer, floating point, or string), thus a form of property list. Attribute expressions can also be more complicated. There is a protocol for evaluating an attribute expression of a classad vis a vis another ad. Two classads match if each ad has attribute requirements that evaluate to true in the context of the other ad. Classad matching is used by the Condor central manager to determine the compatibility of jobs and workstations where they may be run. . This package provides the static library and header files. Package: libclassad0 Source: classads Version: 1.0.9-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1060 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.cs.wisc.edu/condor/classad Priority: extra Section: libs Filename: pool/main/c/classads/libclassad0_1.0.9-2~nd10.10+1_amd64.deb Size: 420736 SHA256: 4e97eb772a263c3966aaea8bba96b532969e2f9df49fb1d7b0608c5116b2626b SHA1: d3754566b5f39b91eee1447d928760b8c4fb100a MD5sum: 8d00ad8adc4dd66e7e3025075bdc0090 Description: library for Condor's classads expression language A classad (classified ad) is a mapping from attribute names to expressions. In the simplest cases, the expressions are simple constants (integer, floating point, or string), thus a form of property list. Attribute expressions can also be more complicated. There is a protocol for evaluating an attribute expression of a classad vis a vis another ad. Two classads match if each ad has attribute requirements that evaluate to true in the context of the other ad. Classad matching is used by the Condor central manager to determine the compatibility of jobs and workstations where they may be run. . This package provides the runtime library. Package: libclassad1 Source: classads Version: 1.0.10-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1024 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.cs.wisc.edu/condor/classad Priority: extra Section: libs Filename: pool/main/c/classads/libclassad1_1.0.10-2~nd10.10+1_amd64.deb Size: 421294 SHA256: 8386410048c31830d2212d02bbe6a3df75926641b6a24b69f792ea9ccbe96736 SHA1: eaf2a7db4dc8823a2f02687d0ea3da6fff208f00 MD5sum: 7f6ab71ce60b34212bb92b53f4c4cb92 Description: library for Condor's classads expression language A classad (classified ad) is a mapping from attribute names to expressions. In the simplest cases, the expressions are simple constants (integer, floating point, or string), thus a form of property list. Attribute expressions can also be more complicated. There is a protocol for evaluating an attribute expression of a classad vis a vis another ad. Two classads match if each ad has attribute requirements that evaluate to true in the context of the other ad. Classad matching is used by the Condor central manager to determine the compatibility of jobs and workstations where they may be run. . This package provides the runtime library. Package: libdmtcpaware-dev Source: dmtcp Version: 1.2.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 36 Depends: neurodebian-popularity-contest, libdmtcpaware1 (= 1.2.1-1~nd10.10+1) Homepage: http://dmtcp.sourceforge.net Priority: optional Section: libdevel Filename: pool/main/d/dmtcp/libdmtcpaware-dev_1.2.1-1~nd10.10+1_amd64.deb Size: 6358 SHA256: 74356ba9db1905a677c4c6bb803e09602cfc7943478df831e472124d0ecece7f SHA1: 740ae0e024f35f3589cf8c0814f1cfe51c450b9f MD5sum: e3facd19369d153f129ea071cb61408b Description: DMTCP programming interface -- developer package DMTCP (Distributed MultiThreaded Checkpointing) is a tool to transparently checkpointing the state of an arbitrary group of programs including multi-threaded and distributed computations. It operates directly on the user binary executable, with no Linux kernel modules or other kernel mods. . Among the applications supported by DMTCP are OpenMPI, MATLAB, Python, Perl, and many programming languages and shell scripting languages. DMTCP also supports GNU screen sessions, including vim/cscope and emacs. With the use of TightVNC, it can also checkpoint and restart X-Windows applications, as long as they do not use extensions (e.g.: no OpenGL, no video). . This package provides libraries for developing applications that need to interact with dmtcp. Package: libdmtcpaware1 Source: dmtcp Version: 1.2.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 48 Depends: neurodebian-popularity-contest, dmtcp, libc6 (>= 2.2.5) Homepage: http://dmtcp.sourceforge.net Priority: optional Section: libs Filename: pool/main/d/dmtcp/libdmtcpaware1_1.2.1-1~nd10.10+1_amd64.deb Size: 6170 SHA256: e868b6614f6857e23d17f31f36754c5371d43eaf7ba23501f9738874c5708082 SHA1: 5a10ebc6b9996fcc31943535ca1db9eae9403cc2 MD5sum: 2ce34d9f0104d5b44c8cee47436de8bf Description: DMTCP programming interface DMTCP (Distributed MultiThreaded Checkpointing) is a tool to transparently checkpointing the state of an arbitrary group of programs including multi-threaded and distributed computations. It operates directly on the user binary executable, with no Linux kernel modules or other kernel mods. . Among the applications supported by DMTCP are OpenMPI, MATLAB, Python, Perl, and many programming languages and shell scripting languages. DMTCP also supports GNU screen sessions, including vim/cscope and emacs. With the use of TightVNC, it can also checkpoint and restart X-Windows applications, as long as they do not use extensions (e.g.: no OpenGL, no video). . This package provides a programming interface to allow checkpointed applications to interact with dmtcp. Package: libfreenect-demos Source: libfreenect Version: 1:0.0.1+20101211+1-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 124 Depends: neurodebian-popularity-contest, freeglut3, libc6 (>= 2.3.4), libfreenect0.0, libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libice6 (>= 1:1.0.0), libsm6, libstdc++6 (>= 4.4.0), libusb-1.0-0 (>= 2:1.0.8), libx11-6, libxext6, libxi6, libxmu6, libglut3 Homepage: http://openkinect.org/ Priority: extra Section: libdevel Filename: pool/main/libf/libfreenect/libfreenect-demos_0.0.1+20101211+1-2~nd10.10+1_amd64.deb Size: 23764 SHA256: 9a7dd736759857bb33dc08d6c0b11281f3ae8ea58c3f68d8c98502e0b4c8ac09 SHA1: e19f98e4e59b856c1cbd99ba49096579444b870c MD5sum: 756aa998a9f87519175031925b3b2112 Description: library for accessing Kinect USB camera -- demonstrations libfreenect is the core library for accessing the Microsoft Kinect USB camera. . This package includes some example programs for kinect. All programs start with a freenec- prefix. Package: libfreenect-dev Source: libfreenect Version: 1:0.0.1+20101211+1-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 120 Depends: neurodebian-popularity-contest, libusb-1.0-0-dev, libfreenect0.0 (= 1:0.0.1+20101211+1-2~nd10.10+1) Homepage: http://openkinect.org/ Priority: extra Section: libdevel Filename: pool/main/libf/libfreenect/libfreenect-dev_0.0.1+20101211+1-2~nd10.10+1_amd64.deb Size: 21650 SHA256: 752103004e86500fe7d1636097bdfc02ca7fa35ba37907c73a676e31fa91e40c SHA1: 8d3dd7ef3917c557ae2e1c0494e96c00c6cd9fc8 MD5sum: 36996945aee69f4bf60ec99928c34418 Description: library for accessing Kinect USB camera -- development files libfreenect is the core library for accessing the Microsoft Kinect USB camera. . This is the development package containing the libraries and header for software development with libfreenect. Package: libfreenect0.0 Source: libfreenect Version: 1:0.0.1+20101211+1-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 136 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libusb-1.0-0 (>= 2:1.0.8), udev Conflicts: libfreenect Homepage: http://openkinect.org/ Priority: extra Section: libs Filename: pool/main/libf/libfreenect/libfreenect0.0_0.0.1+20101211+1-2~nd10.10+1_amd64.deb Size: 25830 SHA256: fba44030e39ad33e5a15737dddc05e7d5f53cdc30a5e5716889030a0e6830a15 SHA1: 540931bb30dc554114667f1afecf9238231b75a6 MD5sum: 38b4fef523829f2a8d0005c1cca8a89c Description: library for accessing Kinect USB camera libfreenect is the core library for accessing the Microsoft Kinect USB camera. Currently, the library supports access to: - RGB and Depth Images - Motors - Accelerometer - LED Package: libgdf-dev Source: libgdf Version: 0.1.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 140 Depends: neurodebian-popularity-contest, libgdf0 (= 0.1.1-1~nd10.10+1) Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: libdevel Filename: pool/main/libg/libgdf/libgdf-dev_0.1.1-1~nd10.10+1_amd64.deb Size: 18532 SHA256: 2defff266e8bb2caa607e5f62111107b9f7efcff23469b580381c5f50ac603f7 SHA1: e9e55b7504b82fa93f9674359865bd1bbedeb70d MD5sum: 59cb50c2ba4692d0e720a4f8cbbd324a Description: IO library for the GDF -- development library GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides the header files and static library. Package: libgdf0 Source: libgdf Version: 0.1.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 328 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: libs Filename: pool/main/libg/libgdf/libgdf0_0.1.1-1~nd10.10+1_amd64.deb Size: 103042 SHA256: a29cf9efb120fc91a0d6f0d6cad0398b7d59c2b1d497ca6b060c89e379b74129 SHA1: 5aaa4c1c873585dc1aeb4bd6f81d22b659303389 MD5sum: cba1d457d04acfebe16b9e2d301cba5a Description: IO library for the GDF (general dataformat for biosignals) GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package contains the shared library. Package: libgdf0-dbg Source: libgdf Version: 0.1.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 4108 Depends: neurodebian-popularity-contest, libgdf0 (= 0.1.1-1~nd10.10+1) Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: debug Filename: pool/main/libg/libgdf/libgdf0-dbg_0.1.1-1~nd10.10+1_amd64.deb Size: 1119386 SHA256: f55652c057990c21f32a016b343388f58439f3f7033e9ff728cecb44571e2765 SHA1: 64aff3737fbc50c9b76598178fa3b6e73e283c19 MD5sum: 931b7dd23f9bb7b3365ad67139f1c466 Description: IO library for the GDF -- debug symbols GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides debug symbols. Package: libgiftiio-dev Source: gifticlib Version: 1.0.9-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 256 Depends: libgiftiio0 (= 1.0.9-1~maverick.nd1) Homepage: http://www.nitrc.org/projects/gifti Priority: optional Section: libdevel Filename: pool/main/g/gifticlib/libgiftiio-dev_1.0.9-1~maverick.nd1_amd64.deb Size: 65020 SHA256: a5e63ac7d35ef813eed1d81d98075530acbe2f058a945bd212566b4d468bcfc2 SHA1: 47c3332fe15460f79c90c5ca42a2059c93e8e2e9 MD5sum: 6861952fd85b1efebfc95d6a120d9efb Description: IO library for the GIFTI cortical surface data format GIFTI is an XML-based file format for cortical surface data. This reference IO implementation is developed by the Neuroimaging Informatics Technology Initiative (NIfTI). . This package provides the header files and static library. Package: libgiftiio0 Source: gifticlib Version: 1.0.9-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 180 Depends: libc6 (>= 2.4), libexpat1 (>= 1.95.8), libnifti1 (>> 1.1.0-2), zlib1g (>= 1:1.1.4) Homepage: http://www.nitrc.org/projects/gifti Priority: optional Section: libs Filename: pool/main/g/gifticlib/libgiftiio0_1.0.9-1~maverick.nd1_amd64.deb Size: 57604 SHA256: e4754cde9e0089b5774f5bbd3739171f5a68a0115cd50fd84a8c9aa1035fbfcb SHA1: 11983a5c86ae4fab0008551c4f17a5cc0d7ccb1e MD5sum: e7eacce11ea15f9b8b97ea6a242a36c0 Description: IO library for the GIFTI cortical surface data format GIFTI is an XML-based file format for cortical surface data. This reference IO implementation is developed by the Neuroimaging Informatics Technology Initiative (NIfTI). . This package contains the shared library. Package: libnifti-dev Source: nifticlib Version: 2.0.0-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 624 Depends: libnifti2 (= 2.0.0-1~maverick.nd1) Conflicts: libfslio-dev, libnifti0-dev, libnifti1-dev, libniftiio-dev Replaces: libnifti1-dev Homepage: http://niftilib.sourceforge.net Priority: optional Section: libdevel Filename: pool/main/n/nifticlib/libnifti-dev_2.0.0-1~maverick.nd1_amd64.deb Size: 171296 SHA256: a10c25e55440328b1c4ac917735541ee5640176d41cc940c8c6564718d728bf6 SHA1: f0df2a274d65f9c6725a2769503bbbfbb2848624 MD5sum: fc52429aa09b32657fe7d09d3bc8ed11 Description: IO libraries for the NIfTI-1 data format Niftilib is a set of i/o libraries for reading and writing files in the NIfTI-1 data format. NIfTI-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images. . This package provides the header files and static libraries of libniftiio, znzlib and libnifticdf. Package: libnifti-doc Source: nifticlib Version: 2.0.0-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1896 Homepage: http://niftilib.sourceforge.net Priority: optional Section: doc Filename: pool/main/n/nifticlib/libnifti-doc_2.0.0-1~maverick.nd1_all.deb Size: 245398 SHA256: ee170c249d6406abcf28bf82179b9327507e20bc341314191e9339ddbdf725f5 SHA1: 255d82f6d5115000ec47d28dd096cea340261cfc MD5sum: 6293a28d6b4ab6f3e08ee6f766fdd757 Description: NIfTI library API documentation Niftilib is a set of i/o libraries for reading and writing files in the NIfTI-1 data format. NIfTI-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images. . This package provides the library API reference documentation. Package: libnifti2 Source: nifticlib Version: 2.0.0-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 336 Depends: libc6 (>= 2.7), zlib1g (>= 1:1.1.4) Homepage: http://niftilib.sourceforge.net Priority: optional Section: libs Filename: pool/main/n/nifticlib/libnifti2_2.0.0-1~maverick.nd1_amd64.deb Size: 123028 SHA256: 6dc383c542f510dfe43d769101d51d117497011604bbe6dedd2dc2a2ea5e59e1 SHA1: 7e51b50bb5c2e73003a779dcb5818de3ded222d6 MD5sum: c00979d1767d6b98c166fea6528485b8 Description: IO libraries for the NIfTI-1 data format Niftilib is a set of i/o libraries for reading and writing files in the NIfTI-1 data format. NIfTI-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images. . This package contains the shared library of the low-level IO library niftiio, low-level IO library znzlib and the nifticdf shared library that provides functions to compute cumulative distributions and their inverses. Package: libopenmeeg-dev Source: openmeeg Version: 2.0.0.dfsg-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 276 Homepage: http://www-sop.inria.fr/odyssee/software/OpenMEEG/ Priority: extra Section: libdevel Filename: pool/main/o/openmeeg/libopenmeeg-dev_2.0.0.dfsg-2~maverick.nd1_amd64.deb Size: 43850 SHA256: c65760742eb06e6a12fd758b5db143564e27dd25b2eff3f98854e035566991f0 SHA1: 0175dc1e5a5701a201119d7901e256882549e439 MD5sum: 6c45ad3f49003ead9939df00c72abada Description: library for solving EEG and MEG forward and inverse problems OpenMEEG provides state-of-the art tools for processing EEG and MEG data. . The forward problem is implemented using the symmetric Boundary Element method [Kybic et al, 2005], providing excellent accuracy, particularly for superficial cortical sources. The source localization procedures implemented in OpenMEEG are based on a distributed source model, with three different types of regularization: the Minimum Norm, and the L2 and L1 norms of the surface gradient of the sources [Adde et al, 2005]. . This package provides static libraries and header files. Package: libopenmeeg1 Source: openmeeg Version: 2.0.0.dfsg-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 960 Depends: libatlas3gf-base, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libmatio0, libstdc++6 (>= 4.4.0) Homepage: http://www-sop.inria.fr/odyssee/software/OpenMEEG/ Priority: extra Section: science Filename: pool/main/o/openmeeg/libopenmeeg1_2.0.0.dfsg-2~maverick.nd1_amd64.deb Size: 252568 SHA256: 87d6e3f667c493b8615eadbf411b841fde7c47364991ee9256b7e13479a90175 SHA1: 13b3b2307374b46e0421791084bae02fed18238e MD5sum: 30c910d0f9bda2c9d2a4b47cc5812920 Description: library for solving EEG and MEG forward and inverse problems OpenMEEG provides state-of-the art tools for processing EEG and MEG data. . The forward problem is implemented using the symmetric Boundary Element method [Kybic et al, 2005], providing excellent accuracy, particularly for superficial cortical sources. The source localization procedures implemented in OpenMEEG are based on a distributed source model, with three different types of regularization: the Minimum Norm, and the L2 and L1 norms of the surface gradient of the sources [Adde et al, 2005]. Package: libsvm-dev Source: libsvm Version: 3.0-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 148 Depends: neurodebian-popularity-contest, libsvm3 (= 3.0-1~nd10.10+1) Homepage: http://www.csie.ntu.edu.tw/~cjlin/libsvm/ Priority: optional Section: libdevel Filename: pool/main/libs/libsvm/libsvm-dev_3.0-1~nd10.10+1_amd64.deb Size: 28200 SHA256: 193d031c0667c81c1eab7c655db8aa82bc895d0f538ea78e9738faf2c5af9cb6 SHA1: a70f27e948c0c278ef67f0be99f8e76c5613dad6 MD5sum: 6d257eaec29bce115e3c9fe9775d3b16 Description: The LIBSVM header files These are the header files for LIBSVM, a machine-learning library. Package: libsvm-java Source: libsvm Version: 3.0-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 48 Depends: neurodebian-popularity-contest, libsvm3-java Homepage: http://www.csie.ntu.edu.tw/~cjlin/libsvm/ Priority: optional Section: java Filename: pool/main/libs/libsvm/libsvm-java_3.0-1~nd10.10+1_all.deb Size: 2068 SHA256: 8c9fbe247ddc6f15bd3e3c64bfd7f1e3c69405f907da4fa7edeadfe05e9d21d8 SHA1: 8053cf3d05442da7571a056b726ac00a3d77b0e1 MD5sum: 14c1bd18250e02bbcd73cfc70bc8be5c Description: Java API to support vector machine library The functionality of the libsvm are offered in a single jar file. It includes one-class, two-class, multiclass, regression-mode, and probablistic output functionality. . This package solely provides a symbolic link from svm.jar svm3.jar. Package: libsvm-tools Source: libsvm Version: 3.0-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 344 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), python, gnuplot Homepage: http://www.csie.ntu.edu.tw/~cjlin/libsvm/ Priority: optional Section: devel Filename: pool/main/libs/libsvm/libsvm-tools_3.0-1~nd10.10+1_amd64.deb Size: 119876 SHA256: 24047b90f8ca21718b3c0e18b8ff35776f428a237e4339e9b737b6c71e5d0088 SHA1: ef009d9a0cc16aa59dd2d82f591307907a650964 MD5sum: 066e87449c23ca64e084440146e7f239 Description: The LIBSVM binary tools LIBSVM is an easy-to-use package for support vector classification, regression and one-class SVM. It supports multi-class classification, probability outputs, and parameter selection. LIBSVM homepage: http://www.csie.ntu.edu.tw/~cjlin/libsvm Package: libsvm3 Source: libsvm Version: 3.0-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 132 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1) Homepage: http://www.csie.ntu.edu.tw/~cjlin/libsvm/ Priority: optional Section: libs Filename: pool/main/libs/libsvm/libsvm3_3.0-1~nd10.10+1_amd64.deb Size: 46226 SHA256: 578ce97fc2b26f01d354346e6d3d506ca96a57d8c2e3f32e9fe9b9633f1feadb SHA1: 50c1135ef4eda1297908a6a51f5f7ff9ac6fdc63 MD5sum: 7ebafe30e30b61295b29d5c8b2b6f576 Description: library implementing support vector machines The LIBSVM library is used to calculate Support Vector Machine optimizations with a great variety of powerful options. It includes one-class, two-class, multiclass, regression-mode, and probablistic output functionality. It is primarily of interest to machine-learning researchers and artificial intelligence application developers. Package: libsvm3-java Source: libsvm Version: 3.0-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 104 Depends: neurodebian-popularity-contest, gij | java-gcj-compat | java1-runtime | java2-runtime Suggests: java-virtual-machine Conflicts: libsvm2-java (<= 2.91-2) Homepage: http://www.csie.ntu.edu.tw/~cjlin/libsvm/ Priority: optional Section: java Filename: pool/main/libs/libsvm/libsvm3-java_3.0-1~nd10.10+1_all.deb Size: 60484 SHA256: 76811edf43b1aefb334ae653f274201c297bcccac8ac8530bec925b93dff1492 SHA1: 7e6ee936ff6b7679bd9f97fccede3700997e4f37 MD5sum: 6f1946dff229612af5767fcf8da60091 Description: Java API to support vector machine library The functionality of the libsvm are offered in a single jar file. It includes one-class, two-class, multiclass, regression-mode, and probablistic output functionality. Package: lipsia Version: 1.6.0-4~maverick.nd1 Architecture: amd64 Maintainer: Michael Hanke Installed-Size: 3940 Depends: libc6 (>= 2.7), libdcmtk1 (>= 3.5.4), libfftw3-3, libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libgsl0ldbl (>= 1.9), libice6 (>= 1:1.0.0), libnifti1 (>> 1.1.0-2), libqt3-mt (>= 3:3.3.8-b), libsm6, libstdc++6 (>= 4.4.0), libvia0, libx11-6, libxext6, zlib1g (>= 1:1.1.4), via-bin Recommends: dcmtk, lipsia-doc Homepage: http://www.cbs.mpg.de/institute/software/lipsia Priority: optional Section: science Filename: pool/main/l/lipsia/lipsia_1.6.0-4~maverick.nd1_amd64.deb Size: 1350080 SHA256: d6e5814498a44d6f9aa68c26dfe86e5a24398c6727efb40240ab872fad14e217 SHA1: 2887d9c808cbc0861958043d8dea9eee1ccc9c3a MD5sum: 109c0c9b499315d58dad5395c035eb9d Description: analysis suite for MRI and fMRI data Leipzig Image Processing and Statistical Inference Algorithms (LIPSIA) . This is a software package for the data processing and evaluation of functional magnetic resonance images. The analysis of fMRI data comprises various aspects including filtering, spatial transformation, statistical evaluation as well as segmentation and visualization. All these aspects are covered by LIPSIA. For the statistical evaluation, a number of well established and peer-reviewed algorithms were implemented in LIPSIA that allow an efficient and user-friendly processing of fMRI data sets. As the amount of data that must be handled is enormous, an important aspect in the development of LIPSIA was the efficiency of the software implementation. . LIPSIA operates exclusively on data in the VISTA data format. However, the package contains converters for medical image data in iBruker, ANALYZE and NIfTI format -- converting VISTA images into NIfTI files is also supported. Package: lipsia-doc Source: lipsia Version: 1.6.0-4~maverick.nd1 Architecture: all Maintainer: Michael Hanke Installed-Size: 7004 Homepage: http://www.cbs.mpg.de/institute/software/lipsia Priority: optional Section: doc Filename: pool/main/l/lipsia/lipsia-doc_1.6.0-4~maverick.nd1_all.deb Size: 5539260 SHA256: 82338bf6b7642c81e3d25791b543695be0cfdce051003635d2635dd36680651e SHA1: 4605c3847915a816361fb32d35551861a05db84d MD5sum: 405aaaf745427fdfe430d25bb7e8b238 Description: documentation for LIPSIA Leipzig Image Processing and Statistical Inference Algorithms (LIPSIA) . This package provides the LIPSIA documentation in HTML format. Package: matlab-support-dev Source: matlab-support Version: 0.0.14~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 48 Depends: neurodebian-popularity-contest Conflicts: matlab-dev (<= 0.0.14~) Replaces: matlab-dev (<= 0.0.14~) Priority: optional Section: devel Filename: pool/main/m/matlab-support/matlab-support-dev_0.0.14~nd10.10+1_all.deb Size: 5474 SHA256: f7c51ef8d6cf009a787336f581c5ab43064c1bfcac0e2186ba42bcc981f84cb5 SHA1: 91e1e5645f489e771d0e8165293b163381ff044c MD5sum: 9ce86325f3bff1b1805906927bf5f508 Description: helpers for packages building Matlab toolboxes Analogous to Octave a Makefile snippet is provided that configures the locations for architecture independent M-files, binary MEX-extensions, and there corresponding sources. This package can be used as a build-dependency by other packages shipping Matlab toolboxes. Package: mriconvert Version: 2.0.203-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2136 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0), libwxbase2.8-0 (>= 2.8.11.0), libwxgtk2.8-0 (>= 2.8.11.0) Homepage: http://lcni.uoregon.edu/~jolinda/MRIConvert/ Priority: optional Section: science Filename: pool/main/m/mriconvert/mriconvert_2.0.203-1~nd10.10+1_amd64.deb Size: 763694 SHA256: a85b354700c13f442cd42c998e6100f17b10d48c3345780af40e982584c7a3ae SHA1: 9786fd3d6e4df5f32bb208e8e677661b33cceb65 MD5sum: 770fff08fcc865b79385deebb6d37880 Description: medical image file conversion utility MRIConvert is a medical image file conversion utility that converts DICOM files to NIfTI 1.1, Analyze 7.5, SPM99/Analyze, BrainVoyager, and MetaImage volume formats. Package: mricron Version: 0.20110413.1~dfsg.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 15632 Depends: neurodebian-popularity-contest, libatk1.0-0 (>= 1.29.3), libc6 (>= 2.2.5), libcairo2 (>= 1.2.4), libgdk-pixbuf2.0-0 (>= 2.21.6), libglib2.0-0 (>= 2.12.0), libgtk2.0-0 (>= 2.8.0), libpango1.0-0 (>= 1.14.0), libx11-6, mricron-data Suggests: mricron-doc, fsl Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: science Filename: pool/main/m/mricron/mricron_0.20110413.1~dfsg.1-1~nd10.10+1_amd64.deb Size: 4901244 SHA256: 64a2b8d9f7db3ba2304cc3e28377ba5b13176a2f8c0a552def61f65dbd4a1074 SHA1: 315d26a6994f9b3b06f15f1c4960d748756319f9 MD5sum: 3aefe6360dcbcd7c314a8ddd6bbe0266 Description: magnetic resonance image conversion, viewing and analysis This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . In addition to 'mricron', this package also provides 'dcm2nii' that supports converting DICOM and PAR/REC images into the NIfTI format, and 'npm' for non-parametric data analysis. Package: mricron-data Source: mricron Version: 0.20110413.1~dfsg.1-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1804 Depends: neurodebian-popularity-contest Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: science Filename: pool/main/m/mricron/mricron-data_0.20110413.1~dfsg.1-1~nd10.10+1_all.deb Size: 1663610 SHA256: af4ecf44142487a2f7a706160681667d7fab75fe5ef557681a34350aa3095e5a SHA1: 7db9c822451a73c2861d74ed54592a441ffe9258 MD5sum: 9ee4065d31f95100bd89b11f8aedfff2 Description: data files for MRIcron This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . This package provides data files for MRIcron, such as brain atlases, anatomy, and color schemes. Package: mricron-doc Source: mricron Version: 0.20110413.1~dfsg.1-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1176 Depends: neurodebian-popularity-contest Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: doc Filename: pool/main/m/mricron/mricron-doc_0.20110413.1~dfsg.1-1~nd10.10+1_all.deb Size: 735448 SHA256: 85b4b912d0709dad89be8cea868e9d9a882556c6defed39f7a52d5b09d8d3615 SHA1: c14c916d7a1cc8282712c10c7de0e905e5b38a7f MD5sum: b2f69ea8b6f028f7c0603911718cac74 Description: data files for MRIcron This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . This package provides documentation for MRIcron in HTML format. Package: neurodebian-desktop Source: neurodebian Version: 0.25~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 268 Depends: ssh-askpass-gnome | ssh-askpass, desktop-base, gnome-icon-theme, neurodebian-popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-desktop_0.25~nd10.10+1_all.deb Size: 113502 SHA256: 70af92c2e99532f2841de7cbe428e025c81cc32cf22fb736998b6b7312c720e4 SHA1: fa1e04c93dc426a9de806e22e9bfa792a29ba660 MD5sum: ba74e0caab31fa9cbb3fd3292be03183 Description: neuroscience research environment This package contains NeuroDebian artwork (icons, background image) and a NeuroDebian menu featuring most popular neuroscience tools automatically installed upon initial invocation. Package: neurodebian-dev Source: neurodebian Version: 0.25~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4408 Depends: devscripts, cowbuilder, python, neurodebian-keyring Recommends: virtualbox-ose, virtualbox-ose-fuse, zerofree, moreutils Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-dev_0.25~nd10.10+1_all.deb Size: 3845826 SHA256: 09181042da08e6c4e32a50e8ec676a0ae498de341bb5d6fdfacdbe18e05ada90 SHA1: 7640b227f5857ec7cc23aa28f5098a73d8f32c96 MD5sum: 39409f4f872a103fbcb4617bdc3ac522 Description: NeuroDebian development tools neuro.debian.net sphinx website sources and development tools used by NeuroDebian to provide backports for a range of Debian/Ubuntu releases. Package: neurodebian-guest-additions Source: neurodebian Version: 0.25~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 148 Pre-Depends: virtualbox-ose-guest-utils, virtualbox-ose-guest-x11, virtualbox-ose-guest-dkms Depends: sudo, neurodebian-desktop, gdm, update-manager-gnome, update-notifier Recommends: chromium-browser Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-guest-additions_0.25~nd10.10+1_all.deb Size: 12832 SHA256: 61f2d4b91844b6f55d3d4b496db83ec64b4337dff239a3fa5e062079e3997437 SHA1: 4c8b3010310072b4e640cf247bef2c3f83acb40f MD5sum: 9860c67f115b4e5ea8b99fb67ae7eedf Description: NeuroDebian guest additions (DO NOT INSTALL OUTSIDE VIRTUALBOX) This package configures a Debian installation as a guest operating system in a VirtualBox-based virtual machine for NeuroDebian. . DO NOT install this package unless you know what you are doing! For example, installation of this package relaxes several security mechanisms. Package: neurodebian-keyring Source: neurodebian Version: 0.25~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 20 Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-keyring_0.25~nd10.10+1_all.deb Size: 5874 SHA256: 12bd04b5505586ce15da89fedaca949a1cab4db325d751c7447784c66a3a0197 SHA1: 612d59fe60aab8ee7feb1ce1ceb314290bc868c4 MD5sum: 199a94d88866b51441f46250a4deb7a4 Description: GnuPG archive keys of the NeuroDebian archive The NeuroDebian project digitally signs its Release files. This package contains the archive keys used for that. Package: neurodebian-popularity-contest Source: neurodebian Version: 0.25~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 16 Depends: popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-popularity-contest_0.25~nd10.10+1_all.deb Size: 5036 SHA256: 000e584f76cfa93a889654bf05ab06a66816181a33b9a98788071611b40c8c71 SHA1: 813f7df5f58c4daf9d3e497eb4450a9368de0416 MD5sum: 2e9145691ba2f7ac904460c484384097 Description: Helper for NeuroDebian popularity contest submissions This package is a complement to the generic popularity-contest package to enable anonymous submission of usage statistics to NeuroDebian in addition to the popcon submissions to the underlying distribution (e.g. Debian or Ubuntu) popcon server. . Your participation in popcon is important for following reasons: - Popular packages receive more attention from developers, bugs are fixed faster and updates are provided quicker. - Assure that we do not drop support for a previous release of Debian or Ubuntu while are active users. - User statistics could be used by upstream research software developers to acquire funding for continued development. . It has an effect only if you have decided to participate in the Popularity Contest of your distribution, i.e. Debian or Ubuntu. You can always enable or disable your participation in popcon by running 'dpkg-reconfigure popularity-contest' as root. Package: nifti-bin Source: nifticlib Version: 2.0.0-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 200 Depends: libc6 (>= 2.7), libnifti2 Homepage: http://niftilib.sourceforge.net Priority: optional Section: utils Filename: pool/main/n/nifticlib/nifti-bin_2.0.0-1~maverick.nd1_amd64.deb Size: 62302 SHA256: e74b6f17efa9e03e859a450192fe35c0be66c33552d59123271c6704f169758a SHA1: b43f633e1de2af8b1463260231d9e49d819776ef MD5sum: 7947b46fb4d71466cde1e787e1b4f51a Description: tools shipped with the NIfTI library Niftilib is a set of i/o libraries for reading and writing files in the NIfTI-1 data format. NIfTI-1 is a binary file format for storing medical image data, e.g. magnetic resonance image (MRI) and functional MRI (fMRI) brain images. . This package provides the tools that are shipped with the library (nifti_tool, nifti_stats and nifti1_test). Package: nipy-suite Version: 0.1.0-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 36 Depends: python-nibabel (>= 1.0.0), python-nipy (>= 0.1.2+20110114), python-dipy (>= 0.5.0), python-nipype (>= 0.3.3), python-nitime (>= 0.2) Suggests: python-mvpa, psychopy Homepage: http://www.nipy.org Priority: extra Section: python Filename: pool/main/n/nipy-suite/nipy-suite_0.1.0-2_all.deb Size: 3898 SHA256: 882c8580ebd2d458a92f8d851d1ec9291fecf05f6ed98a8b754eb831c95368c8 SHA1: 6501d1d201160520f5aad29d0f9007c17b7d9778 MD5sum: eb090e568264d2f439892bcb98485b8c Description: Neuroimaging in Python NiPy is a comprehensive suite of Python modules to perform analysis of Neuroimaging data in Python. nipy-suite is a metapackage depending on the projects developed under NiPy project umbrella, such as - nibabel: bindings to various neuroimaging data formats - nipy: analysis of structural and functional neuroimaging data - nitime: timeseries analysis - dipy: analysis of MR diffusion imaging data - nipype: pipelines and worfklows Package: nipy-suite-doc Source: nipy-suite Version: 0.1.0-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 32 Depends: python-nibabel-doc (>= 1.0.0), python-nipy-doc (>= 0.1.2+20110114), python-dipy-doc (>= 0.5.0), python-nipype-doc (>= 0.3.3), python-nitime-doc (>= 0.2) Suggests: python-mvpa-doc Homepage: http://www.nipy.org Priority: extra Section: doc Filename: pool/main/n/nipy-suite/nipy-suite-doc_0.1.0-2_all.deb Size: 2250 SHA256: 54985bd9d6eaa352608b357f2deeb066bd2ac12d3c2e463082f5d9178701bbad SHA1: 5d2f5e94ff6b7ff737fe966f4a2e5ff67df93cca MD5sum: 37d2f8b6b6d203edf208afb0cdb56fa3 Description: Neuroimaging in Python -- documentation NiPy is a comprehensive suite of Python modules to perform analysis of Neuroimaging data in Python. . nipy-suite-doc is a metapackage depending on the documentation packages for NiPy projects. Package: octave-biosig Source: biosig4c++ Version: 0.96.3+svn2677-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 56 Depends: neurodebian-popularity-contest, libbiosig0, libblas3gf | libblas.so.3gf | libatlas3gf-base, libc6 (>= 2.4), libcholmod1.7.1 (>= 1:3.4.0), libfftw3-3, libgcc1 (>= 1:4.1.1), libgfortran3 (>= 4.3), libhdf5-serial-1.8.4 | libhdf5-1.8.4, liblapack3gf | liblapack.so.3gf | libatlas3gf-base, libncurses5 (>= 5.7+20100313), libreadline6 (>= 6.0), libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: science Filename: pool/main/b/biosig4c++/octave-biosig_0.96.3+svn2677-1~nd10.10+1_amd64.deb Size: 17748 SHA256: 8b3081cce1d29eff4cb44d0d4924c2fca255c40d87c7969bc5aaa349531cfe80 SHA1: 9cca2d2b9ecab901252c0da64744def240913b02 MD5sum: 4e5100e59858682a3880fe20bac46a79 Description: Octave bindings for BioSig library This package provides Octave bindings for BioSig library. Primary goal -- I/O interface to variety of biomedical file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF. Package: octave-gdf Source: libgdf Version: 0.1.1-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 328 Depends: neurodebian-popularity-contest, octave3.2 (>= 3.2.4), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgdf0, libstdc++6 (>= 4.4.0) Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: science Filename: pool/main/libg/libgdf/octave-gdf_0.1.1-1~nd10.10+1_amd64.deb Size: 132960 SHA256: b6ebf8485c16c15b1aa056e2d7b716134ea8ef55c065c20410fd2b74031d5a72 SHA1: ad873fc7d4f83379ae8275764a593a6533750e7d MD5sum: 0ed0591879a9814a7b18b2c0f677311e Description: IO library for the GDF -- Octave interface GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides Octave bindings for libgdf. Package: octave-psychtoolbox-3 Source: psychtoolbox-3 Version: 3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2512 Depends: neurodebian-popularity-contest, octave3.2 (>= 3.2.4), freeglut3, libasound2 (>> 1.0.22), libc6 (>= 2.7), libdc1394-22, libfreenect0.0, libgl1-mesa-glx | libgl1, libglew1.5 (>= 1.5.2), libglib2.0-0 (>= 2.12.0), libglu1-mesa | libglu1, libgstreamer-plugins-base0.10-0 (>= 0.10.23), libgstreamer0.10-0 (>= 0.10.24), libpciaccess0 (>= 0.8.0+git20071002), libraw1394-11, libstdc++6 (>= 4.1.1), libusb-1.0-0 (>= 2:1.0.8), libx11-6, libxext6, libxml2 (>= 2.6.27), libxxf86vm1, psychtoolbox-3-common (= 3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1), psychtoolbox-3-lib (= 3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1) Provides: psychtoolbox, psychtoolbox-3 Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/octave-psychtoolbox-3_3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1_amd64.deb Size: 731904 SHA256: d85b3db5312b57918f80789c7b403e861a6f391bb7b58ffd5287a34b903959fe SHA1: e4ac130764c0e1287ea967eeafe29a7b9663b5ac MD5sum: 72f8a8165ebff0268b31bff54d90a7d5 Description: toolbox for vision research -- Octave bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains bindings for Octave. . =========================== BIG FAT WARNING ============================ . This packaged version of Psychtoolbox-3 for Debian has been neither extensively tested nor officially released. It is known not to be fully compatible with 64-bit systems (yet). Please do not use it for conducting real experiments, and please report any detected problems to team@neuro.debian.net so we could assure future stable performance of PTB-3 on your systems. . ======================================================================== Package: openmeeg-tools Source: openmeeg Version: 2.0.0.dfsg-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 600 Depends: libatlas3gf-base, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libmatio0, libopenmeeg1, libstdc++6 (>= 4.4.0) Homepage: http://www-sop.inria.fr/odyssee/software/OpenMEEG/ Priority: extra Section: science Filename: pool/main/o/openmeeg/openmeeg-tools_2.0.0.dfsg-2~maverick.nd1_amd64.deb Size: 163230 SHA256: fad9d47731fc75238a1a6da647637e110faa81579ba4ea54e5cd1d1e2423a911 SHA1: 724af280bad2953af20b8db0f737b6dde84908dc MD5sum: cde12d4b4d0cd81fb8f41175c72a78df Description: tools for solving EEG and MEG forward and inverse problems OpenMEEG provides state-of-the art tools for processing EEG and MEG data. . The forward problem is implemented using the symmetric Boundary Element method [Kybic et al, 2005], providing excellent accuracy, particularly for superficial cortical sources. The source localization procedures implemented in OpenMEEG are based on a distributed source model, with three different types of regularization: the Minimum Norm, and the L2 and L1 norms of the surface gradient of the sources [Adde et al, 2005]. . This package provides command line tools. Package: opensesame Version: 0.23+git1-g0212357-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5084 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-qt4, python-pygame (>= 1.8.1~), python-numpy (>= 1.3.0~), python-tk Recommends: python-serial (>= 2.3~) Homepage: http://www.cogsci.nl/software/opensesame Priority: extra Section: science Filename: pool/main/o/opensesame/opensesame_0.23+git1-g0212357-1~nd10.10+1_all.deb Size: 3331768 SHA256: 6dece4641f148a05ea8ee6789b47e808e2fcf178edf70d7b99d6aa09357227cc SHA1: 67f2b2f666b05f90f7fe562042a2602ac642994c MD5sum: 844eef688ce80bbb44c1123b5123c9af Description: graphical experiment builder for the social sciences This graphical environment provides an easy to use, point-and-click interface for creating psychological experiments. In addition to a powerful sketchpad for creating visual stimuli, OpenSesame features a sampler and synthesizer for sound playback. For more complex tasks, OpenSesame supports Python scripting using the built-in editor with syntax highlighting. Python-Version: 2.6 Package: psychopy Version: 1.64.00.dfsg-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4748 Depends: neurodebian-popularity-contest, python (>= 2.4), python-support (>= 0.90.0), python-pyglet | python-pygame, python-opengl, python-numpy, python-matplotlib, python-lxml, python-configobj Recommends: python-wxgtk2.8, python-pyglet, python-pygame, python-openpyxl, python-imaging, python-serial, python-scipy, libavbin0, ipython Suggests: python-iolabs, python-pyxid Homepage: http://www.psychopy.org Priority: optional Section: science Filename: pool/main/p/psychopy/psychopy_1.64.00.dfsg-1~nd10.10+1_all.deb Size: 2611634 SHA256: 1c9de5fb44089b974ce101262aae9eb53cda74cbf93ed4e2e85bec5a2b90d0aa SHA1: d6c33ae869f89cb80f4ba2a8e80c74b31eead09c MD5sum: 8b2de31b48e2322796b7145c748f8d83 Description: environment for creating psychology stimuli in Python PsychoPy provides an environment for creating psychology stimuli using Python scripting language. It combines the graphical strengths of OpenGL with easy Python syntax to give psychophysics a free and simple stimulus presentation and control package. . The goal is to provide, for the busy scientist, tools to control timing and windowing and a simple set of pre-packaged stimuli and methods. PsychoPy features . - IDE GUI for coding in a powerful scripting language (Python) - Builder GUI for rapid development of stimulation sequences - Use of hardware-accelerated graphics (OpenGL) - Integration with Spectrascan PR650 for easy monitor calibration - Simple routines for staircase and constant stimuli experimental methods as well as curve-fitting and bootstrapping - Simple (or complex) GUIs via wxPython - Easy interfaces to joysticks, mice, sound cards etc. via PyGame - Video playback (MPG, DivX, AVI, QuickTime, etc.) as stimuli Python-Version: 2.6 Package: psychtoolbox-3-common Source: psychtoolbox-3 Version: 3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 31372 Depends: neurodebian-popularity-contest Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-common_3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1_all.deb Size: 13337664 SHA256: 307d6b90b3d1418a95b54d3d5c5cbc73bc02c5e4762a678dd406efebd059676c SHA1: f67720a46a2b6556bc5b21ad58837b3b2af18ab2 MD5sum: 507f9d585cde03334ec4528a6428d906 Description: toolbox for vision research -- arch/interpreter independent part Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains architecture independent files (such as .m scripts) . =========================== BIG FAT WARNING ============================ . This packaged version of Psychtoolbox-3 for Debian has been neither extensively tested nor officially released. It is known not to be fully compatible with 64-bit systems (yet). Please do not use it for conducting real experiments, and please report any detected problems to team@neuro.debian.net so we could assure future stable performance of PTB-3 on your systems. . ======================================================================== Package: psychtoolbox-3-dbg Source: psychtoolbox-3 Version: 3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2648 Depends: neurodebian-popularity-contest, octave-psychtoolbox-3 (= 3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1) Homepage: http://psychtoolbox.org Priority: extra Section: debug Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-dbg_3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1_amd64.deb Size: 779392 SHA256: b6abafd4563825d21376536988b45e9c0c1ffa205a230ee7101548582781be6f SHA1: dbbadbf9df2044d3981ece570d86aa9fd7b836d0 MD5sum: 0452f1529695fcd3ac09537b8dd01d92 Description: toolbox for vision research -- debug symbols for binaries Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . To ease debugging and troubleshooting this package contains debug symbols for Octave bindings and other binaries. . =========================== BIG FAT WARNING ============================ . This packaged version of Psychtoolbox-3 for Debian has been neither extensively tested nor officially released. It is known not to be fully compatible with 64-bit systems (yet). Please do not use it for conducting real experiments, and please report any detected problems to team@neuro.debian.net so we could assure future stable performance of PTB-3 on your systems. . ======================================================================== Package: psychtoolbox-3-lib Source: psychtoolbox-3 Version: 3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 268 Depends: neurodebian-popularity-contest, libc6 (>= 2.2.5), libfontconfig1 (>= 2.8.0), libfreetype6 (>= 2.2.1), libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libstdc++6 (>= 4.1.1) Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-lib_3.0.8+svn1934.dfsg1-1~pre2~nd10.10+1_amd64.deb Size: 59726 SHA256: 6d88b3697f599b7c485a04ba775491fdbc803e0971d49c90b44c6be2bec03366 SHA1: c4444297f4da9b65fe1af231895b08898f6ec928 MD5sum: 5cafee29319726658b1869392d06dd5b Description: toolbox for vision research -- arch-specific parts Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains additional binaries (tools/dynamic libraries) used by both Octave and Matlab frontends. . =========================== BIG FAT WARNING ============================ . This packaged version of Psychtoolbox-3 for Debian has been neither extensively tested nor officially released. It is known not to be fully compatible with 64-bit systems (yet). Please do not use it for conducting real experiments, and please report any detected problems to team@neuro.debian.net so we could assure future stable performance of PTB-3 on your systems. . ======================================================================== Package: python-biosig Source: biosig4c++ Version: 0.96.3+svn2677-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 220 Depends: neurodebian-popularity-contest, python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), libbiosig0, libc6 (>= 2.4), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: python Filename: pool/main/b/biosig4c++/python-biosig_0.96.3+svn2677-1~nd10.10+1_amd64.deb Size: 52098 SHA256: 6afd915c22defb197d618410ff61b6c6406e03dcd0543c72cade91cb5344b9c6 SHA1: c037b277e6c684a87a1326640292f6fca1867df7 MD5sum: d7395403d5ab977ec98bc1065b615aec Description: Python bindings for BioSig library This package provides Python bindings for BioSig library. Primary goal -- I/O interface to variety of biomedical file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF. Package: python-brian Source: brian Version: 1.3.0-2~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1692 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-brian-lib (>= 1.3.0-2~nd10.10+1), python-matplotlib (>= 0.90.1), python-numpy (>= 1.3.0), python-scipy (>= 0.7.0) Recommends: python-sympy Suggests: python-brian-doc, python-nose, python-cherrypy Homepage: http://www.briansimulator.org/ Priority: extra Section: python Filename: pool/main/b/brian/python-brian_1.3.0-2~nd10.10+1_all.deb Size: 314078 SHA256: 69f7314dfa3bc518e81cbf6b137dfa61c5847ca6cf772b5c762fd39511711c8f SHA1: 7afecfd99c984b936ae2bdc49d5dbe4bee216b28 MD5sum: 8bfd788f9ea32cdcc864621164a2a1d4 Description: simulator for spiking neural networks Brian is a clock-driven simulator for spiking neural networks. It is designed with an emphasis on flexibility and extensibility, for rapid development and refinement of neural models. Neuron models are specified by sets of user-specified differential equations, threshold conditions and reset conditions (given as strings). The focus is primarily on networks of single compartment neuron models (e.g. leaky integrate-and-fire or Hodgkin-Huxley type neurons). Features include: - a system for specifying quantities with physical dimensions - exact numerical integration for linear differential equations - Euler, Runge-Kutta and exponential Euler integration for nonlinear differential equations - synaptic connections with delays - short-term and long-term plasticity (spike-timing dependent plasticity) - a library of standard model components, including integrate-and-fire equations, synapses and ionic currents - a toolbox for automatically fitting spiking neuron models to electrophysiological recordings Package: python-brian-doc Source: brian Version: 1.3.0-2~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5316 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-brian Homepage: http://www.briansimulator.org/ Priority: extra Section: doc Filename: pool/main/b/brian/python-brian-doc_1.3.0-2~nd10.10+1_all.deb Size: 1648440 SHA256: e9c50c73ed839f1d298e462e35e62fbaa1aaa009e290f20a0f375df79dd160fb SHA1: e753e4810a1fe0dd4845685e6968f749fd0b5c6f MD5sum: 3b4fccceb69f41493869aed073c3c46f Description: simulator for spiking neural networks - documentation Brian is a clock-driven simulator for spiking neural networks. . This package provides user's manual (in HTML format), examples and demos. Package: python-brian-lib Source: brian Version: 1.3.0-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 156 Depends: neurodebian-popularity-contest, python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.briansimulator.org/ Priority: extra Section: python Filename: pool/main/b/brian/python-brian-lib_1.3.0-2~nd10.10+1_amd64.deb Size: 53644 SHA256: d90ca00ecdcb16236ad56aeb23b25c6572d97a23a6e84909adb24aa6ddb583be SHA1: 7faf57b24a140ba5d70d5959026d8d97f2c62c58 MD5sum: 386c37ae5522fdd57e7250e26d6b1f74 Description: simulator for spiking neural networks -- extensions Brian is a clock-driven simulator for spiking neural networks. . This package provides Python binary extensions. Package: python-cfflib Source: cfflib Version: 2.0.5-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 768 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-lxml, python-numpy, python-networkx (>= 1.4), python-nibabel (>= 1.1.0) Recommends: python-nose, python-sphinx, python-tables, python-h5py Provides: python2.6-cfflib Homepage: http://cmtk.org/cfflib Priority: extra Section: python Filename: pool/main/c/cfflib/python-cfflib_2.0.5-1~nd10.10+1_all.deb Size: 217702 SHA256: e69867e547e17d131c2a7e0b5a7e3bb3bf12969249c33349bf35234c19863697 SHA1: 6d6d0e55f17beb741a83b2ce7b469789336bbe40 MD5sum: 51e4fd9582f9fb1106d4972f8d78285b Description: Multi-modal connectome and metadata management and integration The Connectome File Format Library (cfflib) is a Python module for multi-modal neuroimaging connectome data and metadata management and integration. . It enables single subject and multi-subject data integration for a variety of modalities, such as networks, surfaces, volumes, fiber tracks, timeseries, scripts, arbitrary data objects such as homogeneous arrays or CSV/JSON files. It relies on existing Python modules and the standard library for basic data I/O, and adds a layer of metadata annotation as tags or with structured properties to individual data objects. Package: python-dicom Source: pydicom Version: 0.9.4.1-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1804 Depends: python (>= 2.5), python-support (>= 0.90.0) Recommends: python-numpy, python-imaging Suggests: python-matplotlib Homepage: http://code.google.com/p/pydicom/ Priority: optional Section: python Filename: pool/main/p/pydicom/python-dicom_0.9.4.1-1~maverick.nd1_all.deb Size: 360124 SHA256: e11a5ca1d87ad166eefa550498743db961ae2727733b6f01d40d177c7d9c53dd SHA1: 3f767eb7480ef44c6c7a56a839f01e99f8cf849d MD5sum: 0adfc3a91a5b7419208ef94bb7a699a9 Description: DICOM medical file reading and writing pydicom is a pure Python module for parsing DICOM files. DICOM is a standard (http://medical.nema.org) for communicating medical images and related information such as reports and radiotherapy objects. . pydicom makes it easy to read DICOM files into natural pythonic structures for easy manipulation. Modified datasets can be written again to DICOM format files. Package: python-dipy Source: dipy Version: 0.5.0-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2200 Depends: neurodebian-popularity-contest, python-numpy, python-scipy, python-dipy-lib (>= 0.5.0-1~nd10.10+1) Recommends: python-matplotlib, python-vtk, python-nose, python-nibabel, python-tables Suggests: ipython Provides: python2.6-dipy Homepage: http://nipy.org/dipy Priority: extra Section: python Filename: pool/main/d/dipy/python-dipy_0.5.0-1~nd10.10+1_all.deb Size: 1458532 SHA256: 3269c3e1a2d818ac4821c8135c95e9d63dd4ce3b798cb5b22b7ebd4224bf274b SHA1: f1735021cb33ff40680fb0614c98e349b24db91c MD5sum: 1471fa6743305dfe059c574440cf465a Description: toolbox for analysis of MR diffusion imaging data Dipy is a toolbox for the analysis of diffusion magnetic resonance imaging data. It features: - Reconstruction algorithms, e.g. GQI, DTI - Tractography generation algorithms, e.g. EuDX - Intelligent downsampling of tracks - Ultra fast tractography clustering - Resampling datasets with anisotropic voxels to isotropic - Visualizing multiple brains simultaneously - Finding track correspondence between different brains - Warping tractographies into another space, e.g. MNI space - Reading many different file formats, e.g. Trackvis or NIfTI - Dealing with huge tractographies without memory restrictions - Playing with datasets interactively without storing Python-Version: 2.6 Package: python-dipy-doc Source: dipy Version: 0.5.0-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3288 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-dipy Homepage: http://nipy.org/dipy Priority: extra Section: doc Filename: pool/main/d/dipy/python-dipy-doc_0.5.0-1~nd10.10+1_all.deb Size: 1949916 SHA256: 2e3fdf3acfc33d6eddb96146953d0941b28cd078975196e4cd886a1bd2df5d32 SHA1: 493083b35e31e39ce47f7ae341ad3af82229864d MD5sum: 554b462b27c9a5195ddb25af2f96ebe5 Description: toolbox for analysis of MR diffusion imaging data -- documentation Dipy is a toolbox for the analysis of diffusion magnetic resonance imaging data. . This package provides the documentation in HTML format. Package: python-dipy-lib Source: dipy Version: 0.5.0-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 652 Depends: neurodebian-popularity-contest, libc6 (>= 2.4) Provides: python2.6-dipy-lib Homepage: http://nipy.org/dipy Priority: extra Section: python Filename: pool/main/d/dipy/python-dipy-lib_0.5.0-1~nd10.10+1_amd64.deb Size: 220800 SHA256: 2b34d7c4483f601fc939c37d6f3e928077a1a77c7b250260b906b217c8d4b8af SHA1: ff242b0849026cd3509499b7e66aa5486e1b7485 MD5sum: 12cd11e4ce955fcc83b942d050d5bd52 Description: toolbox for analysis of MR diffusion imaging data -- extensions Dipy is a toolbox for the analysis of diffusion magnetic resonance imaging data. . This package provides architecture-dependent builds of the extensions. Python-Version: 2.6 Package: python-freenect Source: libfreenect Version: 1:0.0.1+20101211+1-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 164 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libfreenect0.0, libusb-1.0-0 (>= 2:1.0.8) Suggests: python-numpy, python-matplotlib, python-opencv Homepage: http://openkinect.org/ Priority: extra Section: python Filename: pool/main/libf/libfreenect/python-freenect_0.0.1+20101211+1-2~nd10.10+1_amd64.deb Size: 32190 SHA256: 87c42fedaa8e683aaa3cf666e93f80f3752965a1b00e274836f695188ac96ca7 SHA1: 000c01efcf7bf503df4da27155cb3d57d8a7ec06 MD5sum: 78c314539e8d28f60f8932932dc8c691 Description: library for accessing Kinect USB camera -- Python bindings libfreenect is the core library for accessing the Microsoft Kinect USB camera. . This package provides freenect extension to use libfreenect functionality from Python and includes some demo scripts. Package: python-joblib Source: joblib Version: 0.5.1-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 232 Depends: neurodebian-popularity-contest, python, python-support (>= 0.90.0) Recommends: python-numpy, python-nose, python-simplejson Homepage: http://packages.python.org/joblib/ Priority: optional Section: python Filename: pool/main/j/joblib/python-joblib_0.5.1-1~nd10.10+1_all.deb Size: 44170 SHA256: f6ae1de5302149bb9f5fe544b8731a3ab5778c89a8084e0d82224e0babd24ef1 SHA1: 875386986148ee06c20ad5ee904321630aabefca MD5sum: 14f66b3c9a63845372db81a9cd8f19f6 Description: tools to provide lightweight pipelining in Python Joblib is a set of tools to provide lightweight pipelining in Python. In particular, joblib offers: - transparent disk-caching of the output values and lazy re-evaluation (memoize pattern) - easy simple parallel computing - logging and tracing of the execution . Joblib is optimized to be fast and robust in particular on large, long-running functions and has specific optimizations for numpy arrays. Package: python-libsvm Source: libsvm Version: 3.0-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 76 Depends: neurodebian-popularity-contest, libsvm3 (= 3.0-1~nd10.10+1), python, python-support (>= 0.90.0) Provides: python2.6-libsvm Homepage: http://www.csie.ntu.edu.tw/~cjlin/libsvm/ Priority: optional Section: python Filename: pool/main/libs/libsvm/python-libsvm_3.0-1~nd10.10+1_amd64.deb Size: 7610 SHA256: bd9663b6d36134dd9170ee1f6eee9c73170b51ea13ec3dbbfaee716c840533f6 SHA1: ab7dd46a0d835c0d7e9b35a26980c01a90d3c0e9 MD5sum: 616f9628b43baa9dbe32f893753e869b Description: Python interface for support vector machine library Python interface for the LIBSVM library using ctypes. This new python interface is provided since 2.91, and it is incompatible with the old one. Package: python-mdp Source: mdp Version: 3.1-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1812 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0), python-numpy Recommends: python-scipy, shogun-python-modular, python-libsvm, python-scikits-learn, python-joblib Suggests: python-pp, python-py Enhances: python-mvpa Conflicts: python-libsvm (<< 3.0) Homepage: http://mdp-toolkit.sourceforge.net/ Priority: optional Section: python Filename: pool/main/m/mdp/python-mdp_3.1-1~nd10.10+1_all.deb Size: 455316 SHA256: 8fff54b3773d8fa5d35682fee99430486bc02c91c7d67818527c5c52766e1901 SHA1: 9cc66ac92a72e1336e5592856507457e1f5aa21e MD5sum: 02763920802411c0a59966fcea7ea133 Description: Modular toolkit for Data Processing Python data processing framework. Implemented algorithms include: Principal Component Analysis (PCA), Independent Component Analysis (ICA), Slow Feature Analysis (SFA), Independent Slow Feature Analysis (ISFA), Growing Neural Gas (GNG), Factor Analysis, Fisher Discriminant Analysis (FDA), and Gaussian Classifiers. Package: python-mlpy Source: mlpy Version: 2.2.0~dfsg1-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 424 Depends: python (>= 2.4), python-support (>= 0.90.0), python2.6, python-numpy, python-mlpy-lib (>= 2.2.0~dfsg1-1~maverick.nd1) Suggests: python-mvpa Provides: python2.6-mlpy Homepage: https://mlpy.fbk.eu/ Priority: optional Section: python Filename: pool/main/m/mlpy/python-mlpy_2.2.0~dfsg1-1~maverick.nd1_all.deb Size: 55840 SHA256: 8283e4ed0f79671d42b030290729eda5c540214d36125e1b06fd0b5b3c9a21c7 SHA1: 4bd22103a057fe6eecf855acf12e7e077d38fc19 MD5sum: b0171fc77f895c31946c6d7aed80768d Description: high-performance Python package for predictive modeling mlpy provides high level procedures that support, with few lines of code, the design of rich Data Analysis Protocols (DAPs) for preprocessing, clustering, predictive classification and feature selection. Methods are available for feature weighting and ranking, data resampling, error evaluation and experiment landscaping. . mlpy includes: SVM (Support Vector Machine), KNN (K Nearest Neighbor), FDA, SRDA, PDA, DLDA (Fisher, Spectral Regression, Penalized, Diagonal Linear Discriminant Analysis) for classification and feature weighting, I-RELIEF, DWT and FSSun for feature weighting, *RFE (Recursive Feature Elimination) and RFS (Recursive Forward Selection) for feature ranking, DWT, UWT, CWT (Discrete, Undecimated, Continuous Wavelet Transform), KNN imputing, DTW (Dynamic Time Warping), Hierarchical Clustering, k-medoids, Resampling Methods, Metric Functions, Canberra indicators. Python-Version: 2.6 Package: python-mlpy-doc Source: mlpy Version: 2.2.0~dfsg1-1~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1132 Depends: libjs-jquery Suggests: python-mlpy Homepage: https://mlpy.fbk.eu/ Priority: optional Section: doc Filename: pool/main/m/mlpy/python-mlpy-doc_2.2.0~dfsg1-1~maverick.nd1_all.deb Size: 478862 SHA256: d4a1ca68b49b3b1fa7a35abdc1e263f00970d4a6cfde9fd5388508b5c3273ce9 SHA1: 3a203bde333a49868ea27467bb04fa9eb6870af6 MD5sum: da3c2ef1ca5363c2774440218a32fb73 Description: documention and examples for mlpy mlpy provides high level procedures that support, with few lines of code, the design of rich Data Analysis Protocols (DAPs) for preprocessing, clustering, predictive classification and feature selection. Methods are available for feature weighting and ranking, data resampling, error evaluation and experiment landscaping. . This package provides user documentation for mlpy in various formats (HTML, PDF). Package: python-mlpy-lib Source: mlpy Version: 2.2.0~dfsg1-1~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 312 Depends: libc6 (>= 2.3.4), libgsl0ldbl (>= 1.9), python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python-numpy Provides: python2.6-mlpy-lib Homepage: https://mlpy.fbk.eu/ Priority: optional Section: python Filename: pool/main/m/mlpy/python-mlpy-lib_2.2.0~dfsg1-1~maverick.nd1_amd64.deb Size: 70820 SHA256: bbfb06fd94be6d0d3288014ace6eece19424cb7b7c2fe7743673d8c6f9d9a568 SHA1: 01d9f84c07de1f9b4e987bf20d41c9df399364e9 MD5sum: 25a7200ed3517d83a23bc8e928a374c1 Description: low-level implementations and bindings for mlpy This is an add-on package for the mlpy providing compiled core functionality. Python-Version: 2.6 Package: python-mpi4py Source: mpi4py Version: 1.2.2-1~pre1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1156 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libopenmpi1.3, python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0) Recommends: openmpi-bin Suggests: python-numpy Homepage: http://code.google.com/p/mpi4py/ Priority: extra Section: python Filename: pool/main/m/mpi4py/python-mpi4py_1.2.2-1~pre1~nd10.10+1_amd64.deb Size: 376202 SHA256: 8803845d8950c74d886f77f9c122a17ddb5ad2e90a62391ecaeb3370dec61ba6 SHA1: bbc3d3080caade391ab21f63d08414ddf34eb88a MD5sum: 8693100f20d29e0ee4ccb8417d76a087 Description: bindings of the Message Passing Interface (MPI) standard MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. . mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an object oriented interface which closely follows MPI-2 C++ bindings. It supports point-to-point (sends, receives) and collective (broadcasts, scatters, gathers) communications of any picklable Python object as well as optimized communications of Python object exposing the single-segment buffer interface (NumPy arrays, builtin bytes/string/array objects). Package: python-mpi4py-dbg Source: mpi4py Version: 1.2.2-1~pre1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2064 Depends: neurodebian-popularity-contest, python-mpi4py (= 1.2.2-1~pre1~nd10.10+1) Homepage: http://code.google.com/p/mpi4py/ Priority: extra Section: python Filename: pool/main/m/mpi4py/python-mpi4py-dbg_1.2.2-1~pre1~nd10.10+1_amd64.deb Size: 563238 SHA256: 2a0f207f06dbfedc4aa1cde0ebbe36a6e7a0b6c1be01d69ce138b14e90266253 SHA1: ff8bf7e4cf55617a94bbfc8589fd5be250ee0f15 MD5sum: b43ff55aa584174ef00782c1c7e18bdb Description: bindings of the MPI standard -- debug symbols MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. . mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an object oriented interface which closely follows MPI-2 C++ bindings. It supports point-to-point (sends, receives) and collective (broadcasts, scatters, gathers) communications of any picklable Python object as well as optimized communications of Python object exposing the single-segment buffer interface (NumPy arrays, builtin bytes/string/array objects). . This package provides debug symbols. Package: python-mpi4py-doc Source: mpi4py Version: 1.2.2-1~pre1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 272 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-mpi4py Homepage: http://code.google.com/p/mpi4py/ Priority: extra Section: python Filename: pool/main/m/mpi4py/python-mpi4py-doc_1.2.2-1~pre1~nd10.10+1_all.deb Size: 54814 SHA256: 1bcb050af5a49af61314a1053fb07ff943c6267a9ca673e7bf3a391006844725 SHA1: 9aca99120fe1caf7b242bf68424c109eb12ba074 MD5sum: 6539799e7d5bce2eaf1ebfdd041f3e53 Description: bindings of the MPI standard -- documentation MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. . mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an object oriented interface which closely follows MPI-2 C++ bindings. It supports point-to-point (sends, receives) and collective (broadcasts, scatters, gathers) communications of any picklable Python object as well as optimized communications of Python object exposing the single-segment buffer interface (NumPy arrays, builtin bytes/string/array objects). . This package provides HTML rendering of the user's manual. Package: python-mvpa Source: pymvpa Version: 0.4.7-2~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4064 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0), python2.6, python-numpy, python-mvpa-lib (>= 0.4.7-2~nd10.10+1) Recommends: python-nifti, python-psyco, python-mdp, python-scipy, shogun-python-modular, python-pywt, python-matplotlib, python-reportlab Suggests: fslview, fsl, python-nose, python-lxml, python-openopt, python-rpy, python-mvpa-doc Provides: python2.6-mvpa Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa/python-mvpa_0.4.7-2~nd10.10+1_all.deb Size: 2188516 SHA256: 3d3ba1b06e4dcd8238b878fcf4613d25dd267bffd2122668e7b5d4a4d1c96030 SHA1: d02fd18ddd9cd8dd72c1a3ced77ac550ae62e564 MD5sum: 0759d9dcaaaf7423a0eeda52f721b6b3 Description: multivariate pattern analysis with Python Python module to ease pattern classification analyses of large datasets. It provides high-level abstraction of typical processing steps (e.g. data preparation, classification, feature selection, generalization testing), a number of implementations of some popular algorithms (e.g. kNN, GNB, Ridge Regressions, Sparse Multinomial Logistic Regression), and bindings to external machine learning libraries (libsvm, shogun). . While it is not limited to neuroimaging data (e.g. fMRI, or EEG) it is eminently suited for such datasets. Python-Version: 2.6 Package: python-mvpa-doc Source: pymvpa Version: 0.4.7-2~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 41144 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-mvpa Homepage: http://www.pymvpa.org Priority: optional Section: doc Filename: pool/main/p/pymvpa/python-mvpa-doc_0.4.7-2~nd10.10+1_all.deb Size: 8717354 SHA256: c771a0fcb1dbf2d51cd554d68e5b88a0c273115d84f9514365ea18548146c90e SHA1: 90d06dec36974c9891f508d7f3f81d847547c52d MD5sum: 19a615daa57fe6faae3744c4ce333125 Description: documentation and examples for PyMVPA PyMVPA documentation in various formats (HTML, TXT) including * User manual * Developer guidelines * API documentation * BibTeX references file . Additionally, all example scripts shipped with the PyMVPA sources are included. Package: python-mvpa-lib Source: pymvpa Version: 0.4.7-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 124 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), libsvm3, python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python-numpy Provides: python2.6-mvpa-lib Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa/python-mvpa-lib_0.4.7-2~nd10.10+1_amd64.deb Size: 35068 SHA256: 27b0c7506727929efa22e1a27503849b7a3606315f7d28fbd0452083a3fa2029 SHA1: fd0cb5b74b77c41946b3fded2cd023627d43cd5c MD5sum: fdc908488faa4260c948c700c3a63682 Description: low-level implementations and bindings for PyMVPA This is an add-on package for the PyMVPA framework. It provides a low-level implementation of an SMLR classifier and custom Python bindings for the LIBSVM library. Python-Version: 2.6 Package: python-mvpa-snapshot Source: pymvpa-snapshot Version: 0.6.0~rc3-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4584 Depends: neurodebian-popularity-contest, python (>= 2.4), python-support (>= 0.90.0), python-numpy, python-mvpa-snapshot-lib (>= 0.6.0~rc3-1~nd10.10+1) Recommends: python-nibabel, python-psyco, python-mdp, python-scipy, shogun-python-modular, python-pywt, python-matplotlib, python-reportlab, python-h5py Suggests: fslview, fsl, python-nose, python-lxml, python-openopt, python-rpy2, python-mvpa-doc, python-scikits-learn Conflicts: python-mvpa Provides: python2.6-mvpa-snapshot Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa-snapshot/python-mvpa-snapshot_0.6.0~rc3-1~nd10.10+1_all.deb Size: 2312824 SHA256: 6851208905573a1d3fa376a5f11720056c50f2a55e7303a3456a1ea1c88759cf SHA1: 917eb7c89306a9f4b95214167de236749c48def5 MD5sum: e9f01c011f368941d2293c36804e26ec Description: multivariate pattern analysis with Python Python module to ease pattern classification analyses of large datasets. It provides high-level abstraction of typical processing steps (e.g. data preparation, classification, feature selection, generalization testing), a number of implementations of some popular algorithms (e.g. kNN, Ridge Regressions, Sparse Multinomial Logistic Regression), and bindings to external machine learning libraries (libsvm, shogun). . While it is not limited to neuroimaging data (e.g. fMRI, or EEG) it is eminently suited for such datasets. . This is a package of a development snapshot. The latest released version is provided by the python-mvpa package. Python-Version: 2.6 Package: python-mvpa-snapshot-lib Source: pymvpa-snapshot Version: 0.6.0~rc3-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 124 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), libsvm3, python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python-numpy Conflicts: python-mvpa-lib Provides: python2.6-mvpa-snapshot-lib Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa-snapshot/python-mvpa-snapshot-lib_0.6.0~rc3-1~nd10.10+1_amd64.deb Size: 43378 SHA256: de4f6ff8cefb3675db278356af09dcbfc163cd1ba35a5873223c9ee1ef8ae1e2 SHA1: 41199602ef9011c988c2be8ae7c38249685c49a5 MD5sum: 98b2a4842e3b6697a0f7662308bf2713 Description: low-level implementations and bindings for PyMVPA This is an add-on package for the PyMVPA framework. It provides a low-level implementation of an SMLR classifier and custom Python bindings for the LIBSVM library. . This is a package of a development snapshot. The latest released version is provided by the python-mvpa-lib package. Python-Version: 2.6 Package: python-networkx Version: 1.4-2~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2672 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0) Recommends: python-numpy, python-scipy, python-pygraphviz | python-pydot, python-pkg-resources, python-matplotlib, python-yaml Homepage: http://networkx.lanl.gov/ Priority: optional Section: python Filename: pool/main/p/python-networkx/python-networkx_1.4-2~nd10.10+1_all.deb Size: 647264 SHA256: b017027eef54f848795bccd39ea12a2dbea8a87dc1f41f67337820a83a670f1d SHA1: 0c489fa2a3363b77c331c3b0f70e9ab7b5dea954 MD5sum: 266fe36b0aff4b3fd67ab0a1d4022ea8 Description: tool to create, manipulate and study complex networks NetworkX is a Python-based package for the creation, manipulation, and study of the structure, dynamics, and functions of complex networks. . The structure of a graph or network is encoded in the edges (connections, links, ties, arcs, bonds) between nodes (vertices, sites, actors). If unqualified, by graph it's meant a simple undirected graph, i.e. no self-loops and no multiple edges are allowed. By a network it's usually meant a graph with weights (fields, properties) on nodes and/or edges. . The potential audience for NetworkX includes: mathematicians, physicists, biologists, computer scientists, social scientists. Package: python-networkx-doc Source: python-networkx Version: 1.4-2~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 15832 Depends: neurodebian-popularity-contest Homepage: http://networkx.lanl.gov/ Priority: optional Section: doc Filename: pool/main/p/python-networkx/python-networkx-doc_1.4-2~nd10.10+1_all.deb Size: 6213732 SHA256: 579c78d05cab19f1ccf3d85dd7a4e294a1590a130f3ff43b67488237504fd7c7 SHA1: a1eea5abeaaf193843999b87813fac5ebd1030e1 MD5sum: bd65e5e64a2d788e3947c5d2ff0afe31 Description: tool to create, manipulate and study complex networks - documentation NetworkX is a Python-based package for the creation, manipulation, and study of the structure, dynamics, and functions of complex networks. . The structure of a graph or network is encoded in the edges (connections, links, ties, arcs, bonds) between nodes (vertices, sites, actors). If unqualified, by graph it's meant a simple undirected graph, i.e. no self-loops and no multiple edges are allowed. By a network it's usually meant a graph with weights (fields, properties) on nodes and/or edges. . The potential audience for NetworkX includes: mathematicians, physicists, biologists, computer scientists, social scientists. . This package contains documentation for NetworkX. Package: python-nibabel Source: nibabel Version: 1.1.0-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3604 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0), python-numpy, python-scipy Recommends: python-dicom Suggests: python-nibabel-doc Provides: python2.6-nibabel Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: python Filename: pool/main/n/nibabel/python-nibabel_1.1.0-1~nd10.10+1_all.deb Size: 1665746 SHA256: 51cbae43af67247b4c78921c369abe1e3a611e81c46a0ddccc89da413346a249 SHA1: 168c12f80d00ef8d07f224d8b75c5f6b578dbf40 MD5sum: 57697de584a11b783e40a9f736adbce7 Description: Python bindings to various neuroimaging data formats NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package also provides a commandline tool for conversion of PAR/REC to NIfTI images. Python-Version: 2.6 Package: python-nibabel-doc Source: nibabel Version: 1.1.0-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2748 Depends: neurodebian-popularity-contest, libjs-jquery Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: doc Filename: pool/main/n/nibabel/python-nibabel-doc_1.1.0-1~nd10.10+1_all.deb Size: 405318 SHA256: 612d6bc5ef9527f0757d3e18cd4ee1b6c019adae09d9ce31b6bbce066753c6c9 SHA1: 2e81bd0dbc7eb867a8d094d63d6d41a537352af8 MD5sum: 89bc44603afece12d9598dfd6ad9f907 Description: documentation for NiBabel NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package provides the documentation in HTML format. Package: python-nifti Source: pynifti Version: 0.20100607.1-2~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1132 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libnifti2, python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python2.6, python-numpy, libjs-jquery Provides: python2.6-nifti Homepage: http://niftilib.sourceforge.net/pynifti/ Priority: optional Section: python Filename: pool/main/p/pynifti/python-nifti_0.20100607.1-2~nd10.10+1_amd64.deb Size: 290422 SHA256: 69839ff36810c93da924bf87ab1282a52fb57428e9e6a10622cf7c9f064a62a9 SHA1: e3185755a89db67181f7f710d4fb0a745fdfbf1f MD5sum: 5eefbe3377e569a5e58243c48eff5572 Description: Python interface to the NIfTI I/O libraries Using PyNIfTI one can easily read and write NIfTI and ANALYZE images from within Python. The NiftiImage class provides Python-style access to the full header information. Image data is made available via NumPy arrays. Python-Version: 2.6 Package: python-nipy Source: nipy Version: 0.1.2+20110404-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3380 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0), python-scipy, python-numpy (>= 1.2), python-nibabel, python-nipy-lib (>= 0.1.2+20110404-1~nd10.10+1) Recommends: python-matplotlib, mayavi2 Suggests: python-mvpa Provides: python2.6-nipy Homepage: http://neuroimaging.scipy.org Priority: extra Section: python Filename: pool/main/n/nipy/python-nipy_0.1.2+20110404-1~nd10.10+1_all.deb Size: 692224 SHA256: b8d378974d28712198e023b9c31824ab68eb88ee9ab223cb6cbb5ac749405e01 SHA1: 9ac20e7f3262f2404d83991585d7246895aaf65a MD5sum: d78e0adaf079e645eee7808344ce9585 Description: Analysis of structural and functional neuroimaging data NiPy is a Python-based framework for the analysis of structural and functional neuroimaging data. It currently has a full system for general linear modeling of functional magnetic resonance imaging (fMRI). Python-Version: 2.6 Package: python-nipy-doc Source: nipy Version: 0.1.2+20110404-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9480 Depends: neurodebian-popularity-contest, libjs-jquery Recommends: python-nipy Homepage: http://neuroimaging.scipy.org Priority: extra Section: doc Filename: pool/main/n/nipy/python-nipy-doc_0.1.2+20110404-1~nd10.10+1_all.deb Size: 2554288 SHA256: ec88b5165fdef5c35344cd21bff24835ffdfdc24f2397d7167331bc534c50686 SHA1: 2426a1a3654f0c9abd024062663f0b8afc3c5e80 MD5sum: 96027f3d43fb86712202d176a7595918 Description: documentation and examples for NiPy This package contains NiPy documentation in various formats (HTML, TXT) including * User manual * Developer guidelines * API documentation Package: python-nipy-lib Source: nipy Version: 0.1.2+20110404-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2700 Depends: neurodebian-popularity-contest, libatlas3gf-base, libc6 (>= 2.4), python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0) Provides: python2.6-nipy-lib Homepage: http://neuroimaging.scipy.org Priority: extra Section: python Filename: pool/main/n/nipy/python-nipy-lib_0.1.2+20110404-1~nd10.10+1_amd64.deb Size: 879430 SHA256: 8f1adee59ca65399e6baf87f4593dd1bf6a8e3e1310ab827c33e7faa60a76e87 SHA1: 5a23cf1bb85ce4eb7a1a6da5ee9693b5a106b54d MD5sum: 078898fd8a197cf1fe73c15cf6e186ad Description: Analysis of structural and functional neuroimaging data NiPy is a Python-based framework for the analysis of structural and functional neuroimaging data. It currently has a full system for general linear modeling of functional magnetic resonance imaging (fMRI). . This package provides architecture-dependent builds of the libraries. Python-Version: 2.6 Package: python-nipy-lib-dbg Source: nipy Version: 0.1.2+20110404-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2824 Depends: neurodebian-popularity-contest, libatlas3gf-base, libc6 (>= 2.4), python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python-nipy-lib (= 0.1.2+20110404-1~nd10.10+1) Provides: python2.6-nipy-lib-dbg Homepage: http://neuroimaging.scipy.org Priority: extra Section: debug Filename: pool/main/n/nipy/python-nipy-lib-dbg_0.1.2+20110404-1~nd10.10+1_amd64.deb Size: 943150 SHA256: e81ea628e411908af76b7a2884f5ff46c771eb5cdbd8d1606495ee93a062ca5f SHA1: 8b70c6e264a7b230b688cc4f7dc447d4770428e0 MD5sum: aaf377ef724ccf1a6eef7a6ea15ae653 Description: Analysis of structural and functional neuroimaging data NiPy is a Python-based framework for the analysis of structural and functional neuroimaging data. It currently has a full system for general linear modeling of functional magnetic resonance imaging (fMRI). . This package provides debugging symbols for architecture-dependent builds of the libraries. Python-Version: 2.6 Package: python-nipype Source: nipype Version: 0.3.4-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1816 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0), python-scipy, python-simplejson, python-traits, python-nibabel, python-networkx Recommends: ipython, python-nose, graphviz Suggests: fsl, afni, python-nipy, slicer, matlab-spm8, python-pyxnat Provides: python2.6-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: python Filename: pool/main/n/nipype/python-nipype_0.3.4-1~nd10.10+1_all.deb Size: 316082 SHA256: 188c5a6a71ae09510f4bc48473cca961cd146aabf14925b1093f658621aeb285 SHA1: ebbeb68986cbe9f2882c3a5fe9829dc80bdd42ac MD5sum: 47910ffd13236806297fc30c64617d6e Description: Neuroimaging data analysis pipelines in Python Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). Package: python-nipype-doc Source: nipype Version: 0.3.4-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3940 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: doc Filename: pool/main/n/nipype/python-nipype-doc_0.3.4-1~nd10.10+1_all.deb Size: 882262 SHA256: a062a81f5d18db97cdf8574769b550f3b8aa7824be6c671603d77821f8bcde66 SHA1: 8cefd5a6c349eda3862b85cfc0da472c3f61edc8 MD5sum: e6413bda9e3707ba9f1e1608b2fd0574 Description: Neuroimaging data analysis pipelines in Python -- documentation Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). . This package contains Nipype examples and documentation in various formats. Package: python-nitime Source: nitime Version: 0.2-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 752 Depends: python-numpy, python-scipy Recommends: python-matplotlib, python-nose, python-nibabel, python-networkx Homepage: http://nipy.org/nitime Priority: extra Section: python Filename: pool/main/n/nitime/python-nitime_0.2-1~nd10.10+1_all.deb Size: 312900 SHA256: a597d5285ed2764312a046981666d2fa05fe4e643eecaa260b7c0aec0eb27449 SHA1: 3396ad0f1d125996d6abd2bdc9840d03fe9733ec MD5sum: f121a3106a95ecadd3bad854468df318 Description: timeseries analysis for neuroscience data (nitime) Nitime is a Python module for time-series analysis of data from neuroscience experiments. It contains a core of numerical algorithms for time-series analysis both in the time and spectral domains, a set of container objects to represent time-series, and auxiliary objects that expose a high level interface to the numerical machinery and make common analysis tasks easy to express with compact and semantically clear code. Package: python-nitime-doc Source: nitime Version: 0.2-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4096 Depends: libjs-jquery Suggests: python-nitime Homepage: http://nipy.org/nitime Priority: extra Section: doc Filename: pool/main/n/nitime/python-nitime-doc_0.2-1~nd10.10+1_all.deb Size: 2663834 SHA256: ad266363c0d0170244078baec756d2712034342903a5a6546ea73d52200fcea9 SHA1: b308c4bd273ba626d076fe7e83544668773ab7d9 MD5sum: 1226038c73f2b8fbeabd32bf60f09ad7 Description: timeseries analysis for neuroscience data (nitime) -- documentation Nitime is a Python module for time-series analysis of data from neuroscience experiments. . This package provides the documentation in HTML format. Package: python-openmeeg Source: openmeeg Version: 2.0.0.dfsg-2~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 600 Depends: libatlas3gf-base, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libmatio0, libopenmeeg1, libpython2.6 (>= 2.6), libstdc++6 (>= 4.4.0), python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python-numpy Provides: python2.6-openmeeg Homepage: http://www-sop.inria.fr/odyssee/software/OpenMEEG/ Priority: extra Section: python Filename: pool/main/o/openmeeg/python-openmeeg_2.0.0.dfsg-2~maverick.nd1_amd64.deb Size: 157526 SHA256: 3a95190b1f9aa9128f1ff07a9927bf4285f605c029ff87b7f763905047efe436 SHA1: 303aa983399d068350fe8c0b289533ecfd0ee69e MD5sum: 59f8f5cd00801d0d43f458256051b35c Description: Python bindings for openmeeg library OpenMEEG provides state-of-the art tools for processing EEG and MEG data. . The forward problem is implemented using the symmetric Boundary Element method [Kybic et al, 2005], providing excellent accuracy, particularly for superficial cortical sources. The source localization procedures implemented in OpenMEEG are based on a distributed source model, with three different types of regularization: the Minimum Norm, and the L2 and L1 norms of the surface gradient of the sources [Adde et al, 2005]. . This package provides Python bindings for OpenMEEG library. Python-Version: 2.6 Package: python-openpyxl Source: openpyxl Version: 1.5.0-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 412 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0) Recommends: python-nose Homepage: http://bitbucket.org/ericgazoni/openpyxl/ Priority: optional Section: python Filename: pool/main/o/openpyxl/python-openpyxl_1.5.0-1~nd10.10+1_all.deb Size: 57464 SHA256: dc9ef21446d6be3eaa28830f284a35d1c6d002cfe2585c852ea02a623658dd96 SHA1: 30d1cff8bcd72a2c020cfd141e0cc079b17ac5c5 MD5sum: c14cd6db86450b62ee4c87913a7bcd6b Description: module to read/write OpenXML xlsx/xlsm files Openpyxl is a pure Python module to read/write Excel 2007 (OpenXML) xlsx/xlsm files. Package: python-pyepl Source: pyepl Version: 1.1.0-3~maverick.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 1696 Depends: python (<< 2.7), python (>= 2.6), python-central (>= 0.6.11), python-pyepl-common (= 1.1.0-3~maverick.nd1), python-numpy, python-imaging, python-pygame, python-pyode, python-opengl, ttf-dejavu, libasound2 (>> 1.0.22), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libode1, libsamplerate0, libsndfile1 (>= 1.0.20), libstdc++6 (>= 4.4.0) Conflicts: python2.3-pyepl, python2.4-pyepl Replaces: python2.3-pyepl, python2.4-pyepl Provides: python2.6-pyepl Homepage: http://pyepl.sourceforge.net/ Priority: optional Section: python Filename: pool/main/p/pyepl/python-pyepl_1.1.0-3~maverick.nd1_amd64.deb Size: 381566 SHA256: 5c2db2b03d580c1c40aeb4768b772aae61ebab32a1564b46d58eab61efb2e4a1 SHA1: f900b6fb4e1cabbc59cf0d16db41753165d0422c MD5sum: 8f8968da5e76f1f8748211134d2e645a Description: module for coding psychology experiments in Python PyEPL is a stimuli delivery and response registration toolkit to be used for generating psychology (as well as neuroscience, marketing research, and other) experiments. . It provides - presentation: both visual and auditory stimuli - responses registration: both manual (keyboard/joystick) and sound (microphone) time-stamped - sync-pulsing: synchronizing your behavioral task with external acquisition hardware - flexibility of encoding various experiments due to the use of Python as a description language - fast execution of critical points due to the calls to linked compiled libraries . This toolbox is here to be an alternative for a widely used commercial product E'(E-Prime) . This package provides PyEPL for supported versions of Python. Python-Version: 2.6 Package: python-pyepl-common Source: pyepl Version: 1.1.0-3~maverick.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 852 Depends: python Homepage: http://pyepl.sourceforge.net/ Priority: optional Section: python Filename: pool/main/p/pyepl/python-pyepl-common_1.1.0-3~maverick.nd1_all.deb Size: 817816 SHA256: c48e4f818f9d5f08f12d59d6c1131b7f163f29c8801d3373889a7c20795d2d9f SHA1: 82228fe2202df811391f45df27ceaabcc7abca89 MD5sum: f4abbefb9d51c38b9370f48229577970 Description: module for coding psychology experiments in Python PyEPL is a stimuli delivery and response registration toolkit to be used for generating psychology (as well as neuroscience, marketing research, and other) experiments. . It provides - presentation: both visual and auditory stimuli - responses registration: both manual (keyboard/joystick) and sound (microphone) time-stamped - sync-pulsing: synchronizing your behavioral task with external acquisition hardware - flexibility of encoding various experiments due to the use of Python as a description language - fast execution of critical points due to the calls to linked compiled libraries . This toolbox is here to be an alternative for a widely used commercial product E'(E-Prime) . This package provides common files such as images. Package: python-pyglet Source: pyglet Version: 1.1.4.dfsg-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4356 Depends: neurodebian-popularity-contest, python (>= 2.4), python-support (>= 0.90.0), python-ctypes | python (>= 2.5), libgtk2.0-0, libgl1 | libgl1-mesa-swx11, libglu1 | libglu1-mesa Recommends: libasound2 | libopenal1 Provides: python2.6-pyglet Homepage: http://www.pyglet.org Priority: optional Section: python Filename: pool/main/p/pyglet/python-pyglet_1.1.4.dfsg-1~nd10.10+1_all.deb Size: 972184 SHA256: 48cd04fec2110ce036d16fc32550296c817eef64f138a48b54456bb177ade3d0 SHA1: fe964cc057d4573c9e10663f8a9e2c78b4b69a80 MD5sum: 95d34f27e08151c595ef5e023ab56fe9 Description: cross-platform windowing and multimedia library This library provides an object-oriented programming interface for developing games and other visually-rich applications with Python. pyglet has virtually no external dependencies. For most applications and game requirements, pyglet needs nothing else besides Python, simplifying distribution and installation. It also handles multiple windows and fully aware of multi-monitor setups. . pyglet might be seen as an alternative to PyGame. Package: python-pynn Source: pynn Version: 0.7.0-1~pre1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1004 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0) Recommends: python-jinja2, python-cheetah Suggests: python-neuron, python-brian Homepage: http://neuralensemble.org/trac/PyNN Priority: extra Section: python Filename: pool/main/p/pynn/python-pynn_0.7.0-1~pre1~nd10.10+1_all.deb Size: 171194 SHA256: 6baf0a7df0477e569f6a4335a861ed6b4c2fcf5aa990b8f8ba3eba2183911d67 SHA1: 6ea818377c0d35c2f5612fa79b98f818b83c5c9e MD5sum: 593f269af43bae4f52e44df45db94407 Description: simulator-independent specification of neuronal network models PyNN allows to code for a model once and run it without modification on any simulator that PyNN supports (currently NEURON, NEST, PCSIM and Brian). PyNN translates standard cell-model names and parameter names into simulator-specific names. Package: python-scikits-learn Source: scikit-learn Version: 0.8.0.dfsg-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1424 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0), python-numpy, python-scipy, python-scikits-learn-lib (>= 0.8.0.dfsg-1~nd10.10+1) Recommends: python-nose, python-psyco, python-matplotlib, python-joblib (>= 0.4.5) Suggests: python-dap, python-scikits-optimization, python-scikits-learn-doc Provides: python2.6-scikits-learn Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python-scikits-learn_0.8.0.dfsg-1~nd10.10+1_all.deb Size: 310648 SHA256: 753e688253a8152558b6af43fbdd90631118d87bd09e42157c56f7154a370851 SHA1: 6aaa87ab490d78c9ca9a84aa653e0a563de106b8 MD5sum: 4d4c2ad3cf95e9d9c9f8f9f146ad3548 Description: Python modules for machine learning and data mining scikit-learn is a collection of Python modules relevant to machine/statistical learning and data mining. Non-exhaustive list of included functionality: - Gaussian Mixture Models - Manifold learning - kNN - SVM (via LIBSVM) Python-Version: 2.6 Package: python-scikits-learn-doc Source: scikit-learn Version: 0.8.0.dfsg-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 14612 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-scikits-learn Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: doc Filename: pool/main/s/scikit-learn/python-scikits-learn-doc_0.8.0.dfsg-1~nd10.10+1_all.deb Size: 9029726 SHA256: eb67c51b609f36058d7a81169e8f4bc6efade24a7190ba7edd02c122865871e4 SHA1: bbcff781319a57d64cde663928f7ce716efcf3c6 MD5sum: 51651ef82afb13334041bbc3c1374800 Description: documentation and examples for scikit-learn This package contains documentation and example scripts for python-scikits-learn. Package: python-scikits-learn-lib Source: scikit-learn Version: 0.8.0.dfsg-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1380 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.2.1), python (<< 2.7), python (>= 2.6), python-support (>= 0.90.0), python-numpy Provides: python2.6-scikits-learn-lib Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python-scikits-learn-lib_0.8.0.dfsg-1~nd10.10+1_amd64.deb Size: 523990 SHA256: 7e7bc646581bbed427d145a598577b70b47af0aea6eed412bdf35d9449829888 SHA1: b0df147402e3db8f629de6c54fe51f763dd19ad9 MD5sum: 429b1c56204ee83087af9e3ad2b3930d Description: low-level implementations and bindings for scikits-learn This is an add-on package for python-scikits-learn. It provides low-level implementations and custom Python bindings for the LIBSVM library. Python-Version: 2.6 Package: python-sphinx Source: sphinx Version: 1.0.7-2~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4188 Depends: neurodebian-popularity-contest, python (>= 2.4), python-support (>= 0.90.0), python-docutils (>= 0.5), python-pygments (>= 0.8), python-jinja2 (>= 2.2), libjs-jquery Recommends: python (>= 2.6) | python-simplejson, python-imaging Suggests: jsmath Homepage: http://sphinx.pocoo.org/ Priority: optional Section: python Filename: pool/main/s/sphinx/python-sphinx_1.0.7-2~nd10.10+1_all.deb Size: 1260220 SHA256: f28f090879ac7000b7776776b7abf460bd1fa769febf27683218710014d1ea0f SHA1: 617ccda8c98c0be4c7d6ab50a61699a10c19d219 MD5sum: 6927c8799a2a3a86523898580e080d10 Description: tool for producing documentation for Python projects Sphinx is a tool for producing documentation for Python projects, using reStructuredText as markup language. . Sphinx features: * HTML, CHM, LaTeX output, * Cross-referencing source code, * Automatic indices, * Code highlighting, using Pygments, * Extensibility. Existing extensions: - automatic testing of code snippets, - including doctrings from Python modules. Package: python-stfio Source: stimfit Version: 0.10.13-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 444 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libhdf5-serial-1.8.4 | libhdf5-1.8.4, libpython2.6 (>= 2.6), libstdc++6 (>= 4.4.0), python-numpy Recommends: python-matplotlib, python-scipy Homepage: http://www.stimfit.org Priority: optional Section: python Filename: pool/main/s/stimfit/python-stfio_0.10.13-1~nd10.10+1_amd64.deb Size: 184830 SHA256: ec0d5927b080bd39354872e03c7720149a488d2a82895ba1a0cc823fe783b5ce SHA1: 76273eaa4ddc661a1fb97fa89529ae1decf746eb MD5sum: 58e80a0f2733e34e20bf66c878596616 Description: A Python module to read common electrophysiology file formats. The stfio module allows you to read common electrophysiology file formats from Python. Axon binaries (abf), Axon text (atf), HEKA (dat), CFS (dat/cfs), Axograph (axgd/axgx) are currently supported. Package: python-sympy Source: sympy Version: 0.6.7-1.1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9268 Depends: neurodebian-popularity-contest, python, python-support (>= 0.90.0) Recommends: python-imaging, python-ctypes, ipython Homepage: http://code.google.com/p/sympy/ Priority: optional Section: python Filename: pool/main/s/sympy/python-sympy_0.6.7-1.1~nd10.10+1_all.deb Size: 1696290 SHA256: 93ac728b1ec8442b324d0a353c6fc7606cc1b2623934399301b8e1626c5497c1 SHA1: 561bfc91c596b02c7212a563936557dea2e4fb1b MD5sum: 675f1e681ed76bd6478e9e9f2d7b3a24 Description: Computer Algebra System (CAS) in Python SymPy is a Python library for symbolic mathematics (manipulation). It aims to become a full-featured computer algebra system (CAS) while keeping the code as simple as possible in order to be comprehensible and easily extensible. SymPy is written entirely in Python and does not require any external libraries, except optionally for plotting support. Package: sigviewer Version: 0.5.1+svn556-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1044 Depends: neurodebian-popularity-contest, libbiosig0, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libqt4-xml (>= 4:4.5.3), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.6.1), libstdc++6 (>= 4.4.0) Homepage: http://sigviewer.sourceforge.net Priority: extra Section: science Filename: pool/main/s/sigviewer/sigviewer_0.5.1+svn556-1~nd10.10+1_amd64.deb Size: 440812 SHA256: aa324a81669408f28c0123466a67dbe28d9d9d8024d80b1da6e062d3577788bf SHA1: 9b35ab703f15f3148a8d33a3f6f8ec50ed611b36 MD5sum: 841ccf9e595445f38d5728de62b6a1af Description: GUI viewer for biosignals such as EEG, EMG, and ECG SigViewer is a viewing and scoring software for biomedical signal data. It relies on biosig4c++ library which supports a number of data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED . . Besides displaying biosignals, SigViewer supports creating annotations to select artifacts or specific events. Package: spm8-common Source: spm8 Version: 8.4290~dfsg.1-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 22192 Depends: neurodebian-popularity-contest Recommends: spm8-data, spm8-doc Priority: extra Section: science Filename: pool/main/s/spm8/spm8-common_8.4290~dfsg.1-1~nd10.10+1_all.deb Size: 10547304 SHA256: 7535453b5cb043adb69c504dd8278da9ed3cd138e1dc63de1445010e73b73e1d SHA1: 5d9ac3173f34e823da382333ec734fe809a075d5 MD5sum: 6c707522636ec13a8211bdd61bdf647c Description: analysis of brain imaging data sequences Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the platform-independent M-files. Package: spm8-data Source: spm8 Version: 8.4290~dfsg.1-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 73084 Depends: neurodebian-popularity-contest Priority: extra Section: science Filename: pool/main/s/spm8/spm8-data_8.4290~dfsg.1-1~nd10.10+1_all.deb Size: 52167536 SHA256: 21c5936452e8e395dce1eb87a27e6d5e44ecf31c3e115c33cabc16d481dd5b4a SHA1: 8cc553875b00c2fda02201e56e40e4f704a0c912 MD5sum: 617a4cc7e6c2d742ad07657521653fb2 Description: data files for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provide the data files shipped with the SPM distribution, such as various stereotaxic brain space templates and EEG channel setups. Package: spm8-doc Source: spm8 Version: 8.4290~dfsg.1-1~nd10.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9380 Depends: neurodebian-popularity-contest Priority: extra Section: doc Filename: pool/main/s/spm8/spm8-doc_8.4290~dfsg.1-1~nd10.10+1_all.deb Size: 8648806 SHA256: 69816479e39f295424837f9f365776230c896127cd8b8039137788276f0d9783 SHA1: e8526aa7a841fd6191aabda15fd93907b303cf72 MD5sum: 14db5a1cce0c78dbda4fb664196514d7 Description: manual for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the SPM manual in PDF format. Package: stimfit Version: 0.10.13-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 2052 Depends: neurodebian-popularity-contest, libatlas3gf-base, libc6 (>= 2.4), libfftw3-3, libgcc1 (>= 1:4.1.1), libhdf5-serial-1.8.4 | libhdf5-1.8.4, libpython2.6 (>= 2.6), libstdc++6 (>= 4.4.0), libwxbase2.8-0 (>= 2.8.11.0), libwxgtk2.8-0 (>= 2.8.11.0), python-wxgtk2.8 (>= 2.8.9), python-numpy, python-matplotlib Recommends: python-scipy Homepage: http://www.stimfit.org Priority: optional Section: science Filename: pool/main/s/stimfit/stimfit_0.10.13-1~nd10.10+1_amd64.deb Size: 723908 SHA256: b9589ff9cb5837521ed6c210f2d44d4ef1d556d90d2d95b500f9a942fcc7d4d9 SHA1: 27a2fa04d21670232a8cae4556270f9d505be189 MD5sum: 6860c1cc57d60311b91b266c83a407ce Description: A program for viewing and analyzing electrophysiological data Stimfit is a free, fast and simple program for viewing and analyzing electrophysiological data. It features an embedded Python shell that allows you to extend the program functionality by using numerical libraries such as NumPy and SciPy. Package: stimfit-dbg Source: stimfit Version: 0.10.13-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 14868 Depends: neurodebian-popularity-contest, stimfit Recommends: python-matplotlib, python-scipy, python-stfio Homepage: http://www.stimfit.org Priority: extra Section: debug Filename: pool/main/s/stimfit/stimfit-dbg_0.10.13-1~nd10.10+1_amd64.deb Size: 4991590 SHA256: 3aeb0754ca400c12aad7cd96be199a6728bb946f0a951ce0bd1a32115a3ddc8a SHA1: 63abf2432993d11319829c61d43503a7cfd6ff4a MD5sum: f64f08ae15077718376f2bc6c7dbd154 Description: Debug symbols for stimfit Stimfit is a free, fast and simple program for viewing and analyzing electrophysiological data. It features an embedded Python shell that allows you to extend the program functionality by using numerical libraries such as NumPy and SciPy. Package: svgtune Version: 0.1.0-2 Architecture: all Maintainer: Yaroslav Halchenko Installed-Size: 64 Depends: python, python-lxml Suggests: inkscape Homepage: http://github.com/yarikoptic/svgtune Priority: optional Section: graphics Filename: pool/main/s/svgtune/svgtune_0.1.0-2_all.deb Size: 6680 SHA256: 69b4df1e0b4c247673265c7f5bb2b2ffe2209d783617bf7f6eadce86633f80e1 SHA1: bec339e4453c35a05a616deef6769a6f2ad2d00d MD5sum: ef6797498477a73f930ad9bc0db3ba73 Description: tool to generate a set of .svg files out of a single .svg file svgtune is just a little helper to generate a set of .svg files out of a single .svg file, by tuning respective groups/layers visibility, transparency or anything else. . It might come very handy for generation of incremental figures to be embedded into the presentation in any format which inkscape could render using original .svg file (e.g. pdf, png). Package: voxbo Version: 1.8.5~svn1246-1~nd10.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 10132 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libfontconfig1 (>= 2.8.0), libfreetype6 (>= 2.2.1), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), libpng12-0 (>= 1.2.13-4), libqt4-network (>= 4:4.5.3), libqt4-qt3support (>= 4:4.5.3), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.6.1), libstdc++6 (>= 4.4.0), libx11-6, libxext6, libxi6, libxrender1, zlib1g (>= 1:1.1.4) Suggests: mni-colin27-nifti, matlab-spm8 Homepage: http://www.voxbo.org Priority: extra Section: science Filename: pool/main/v/voxbo/voxbo_1.8.5~svn1246-1~nd10.10+1_amd64.deb Size: 3708612 SHA256: dec56bf3009e7939a9c1bdfef2e49a7ba2899718a6bc79de63d8989c030aa1dd SHA1: e3e555a3f2b487d958e8bf16c1d63a35b43ebfc8 MD5sum: d0025377c53ae195f0514a76f388b2d2 Description: processing, statistical analysis, and display of brain imaging data This is a toolkit for analysis of functional neuroimaging (chiefly fMRI) experiments and voxel-based lesion-behavior mapping. VoxBo supports the modified GLM (for autocorrelated data), as well as the standard GLM for non-autocorrelated data. The toolkit is designed to be interoperable with AFNI, FSL, SPM and others.