Changes in Nipype¶

Release 0.3.3 (Sep 16, 2010)¶

API: subject_id in ModelSpec is now deprecated
API: spm.Threshold - does not need mask, beta, RPV anymore - takes only one image (stat_image - mind the name change) - works with SPM2 SPM.mat - returns additional map - pre topological FDR
ENH: Added support for Diffusion toolkit
ENH: Added support for FSL slicer and overlay
ENH: Added support for dcm2nii
BF: DataSink properly handles lists of lists now
BF: DataGrabber has option for raising Exception on getting empty lists
BF: Traits logic for ‘requires’ metadata
BF: allows workflows to be relocatable
BF: nested workflows with connections don’t raise connection not found error
BF: multiple workflows with identical nodenames and iterables do not create nestsed workflows

all outputs from nodes are now pickled as part of workflow processing

added git developer docs

FreeSurfer
- Fixed bugs in glmfit and concatenate
- Added group t-test to freesurfer tutorial

Complete redesign of the Interface class - heavy use of Traits.
Changes in the engine API - added Workflow and MapNode. Compulsory name argument.

General:
- Type checking of inputs and outputs using Traits from ETS.
- Support for nested workflows.
- Preliminary Slicer and AFNI support.
- New flexible DataGrabber node.
- AtlasPick and Threshold nodes.
- Preliminary support for XNAT.
- Doubled number of the tutorials.
FSL:
- Added DTI processing nodes (note that TBSS nodes are still experimental).
- Recreated FEAT workflow.
SPM:
- Added New Segment and many other nodes.
- Redesigned second level analysis.