Package: condor-doc Source: condor Version: 7.7.5~dfsg.1-2~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5269 Depends: neurodebian-popularity-contest Priority: extra Section: doc Filename: pool/main/c/condor/condor-doc_7.7.5~dfsg.1-2~nd70+1_all.deb Size: 1285836 SHA256: 8ccccc6f4be9620b48d9883a2aa5cf91e7af9e98ddbbb2f664c2e6eb8f697869 SHA1: 734869e20e10b1e495b4eea9b91c90c041d40579 MD5sum: e6364a52cf39b93af6f86446e011f65b Description: documentation for Condor Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor, Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing system, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package provides Condor's documentation in HTML and PDF format, as well as configuration and other examples. Package: fail2ban Version: 0.8.6-3~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 339 Depends: neurodebian-popularity-contest, python (>= 2.4), python-central (>= 0.6.11), lsb-base (>= 2.0-7) Recommends: iptables, whois, python-gamin Suggests: mailx Homepage: http://www.fail2ban.org Priority: optional Section: net Filename: pool/main/f/fail2ban/fail2ban_0.8.6-3~nd70+1_all.deb Size: 103474 SHA256: 7411a9f1a59f35f2ce8577fefc8166f6427cefb06658182bcbf71b6e891beff9 SHA1: 97021044a86477b6d10483835d3941d86cb734f1 MD5sum: 83a9eca41b424ffe7aa0d86ce093f936 Description: ban hosts that cause multiple authentication errors Fail2ban monitors log files (e.g. /var/log/auth.log, /var/log/apache/access.log) and temporarily or persistently bans failure-prone addresses by updating existing firewall rules. Fail2ban allows easy specification of different actions to be taken such as to ban an IP using iptables or hostsdeny rules, or simply to send a notification email. . By default, it comes with filter expressions for various services (sshd, apache, qmail, proftpd, sasl etc.) but configuration can be easily extended for monitoring any other text file. All filters and actions are given in the config files, thus fail2ban can be adopted to be used with a variety of files and firewalls. Python-Version: current, >= 2.4 Package: libfreenect-doc Source: libfreenect Version: 1:0.1.2+dfsg-5~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 482 Depends: neurodebian-popularity-contest Homepage: http://openkinect.org/ Priority: extra Section: doc Filename: pool/main/libf/libfreenect/libfreenect-doc_0.1.2+dfsg-5~nd70+1_all.deb Size: 90648 SHA256: 4b3435d1a3e16b9d16c52421c7d9d2691b7b7b482a59cc27708d2640d87d4f3e SHA1: 86c081d288a0a66f6421745bbc1c5875f500a96c MD5sum: e29cec7c59813fa2cdfc5fd461c30e7e Description: library for accessing Kinect device -- documentation libfreenect is a cross-platform library that provides the necessary interfaces to activate, initialize, and communicate data with the Kinect hardware. Currently, the library supports access to RGB and depth video streams, motors, accelerometer and LED and provide binding in different languages (C++, Python...) . This library is the low level component of the OpenKinect project which is an open community of people interested in making use of the Xbox Kinect hardware with PCs and other devices. . This package contains the documentation of the API of libfreenect. Package: nuitka Version: 0.3.20.1+ds-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1347 Depends: neurodebian-popularity-contest, g++-4.6 (>= 4.6.1) | g++-4.5, scons (>= 2.0.0), python-dev (>= 2.6.6-2), python (>= 2.6.6-7~) Recommends: python-lxml (>= 2.3), python-qt4 (>= 4.8.6) Suggests: ccache Homepage: http://nuitka.net Priority: optional Section: python Filename: pool/main/n/nuitka/nuitka_0.3.20.1+ds-1~nd70+1_all.deb Size: 305812 SHA256: d0317f7929681101f9db9bf2ac18f6db904da2376fd60686b13268cbc5d6cf62 SHA1: 289abde8922759d7fb4aad5b1983f42a178aaad1 MD5sum: 3840d80c9da0dff67d1a55b086762c68 Description: Python compiler with full language support and CPython compatibility This Python compiler achieves full language compatibility and compiles Python code into compiled objects that are not second class to pure Python objects at all. Package: psychopy Version: 1.73.05.dfsg-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4454 Depends: neurodebian-popularity-contest, python (>= 2.4), python-support (>= 0.90.0), python-pyglet | python-pygame, python-opengl, python-numpy, python-scipy, python-matplotlib, python-lxml, python-configobj Recommends: python-wxgtk2.8, python-pyglet, python-pygame, python-openpyxl, python-imaging, python-serial, libavbin0, ipython Suggests: python-iolabs, python-pyxid Homepage: http://www.psychopy.org Priority: optional Section: science Filename: pool/main/p/psychopy/psychopy_1.73.05.dfsg-1~nd70+1_all.deb Size: 2686034 SHA256: c46a7e379a5e6feebcb0debbd37b6762b2ecf4fd1a9209e02d492b2a6ee5f65b SHA1: 8d7cc73cdba7987d5313348b9c85ad05d845360c MD5sum: 9debbd41a929e4aa56bed8d611785dba Description: environment for creating psychology stimuli in Python PsychoPy provides an environment for creating psychology stimuli using Python scripting language. It combines the graphical strengths of OpenGL with easy Python syntax to give psychophysics a free and simple stimulus presentation and control package. . The goal is to provide, for the busy scientist, tools to control timing and windowing and a simple set of pre-packaged stimuli and methods. PsychoPy features . - IDE GUI for coding in a powerful scripting language (Python) - Builder GUI for rapid development of stimulation sequences - Use of hardware-accelerated graphics (OpenGL) - Integration with Spectrascan PR650 for easy monitor calibration - Simple routines for staircase and constant stimuli experimental methods as well as curve-fitting and bootstrapping - Simple (or complex) GUIs via wxPython - Easy interfaces to joysticks, mice, sound cards etc. via PyGame - Video playback (MPG, DivX, AVI, QuickTime, etc.) as stimuli Python-Version: 2.6, 2.7 Package: psychtoolbox-3-common Source: psychtoolbox-3 Version: 3.0.9+svn2514.dfsg1-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 47144 Depends: neurodebian-popularity-contest Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-common_3.0.9+svn2514.dfsg1-1~nd70+1_all.deb Size: 19474762 SHA256: ab25c03f184a89587168a9b2eb372ac17caeb77a0520d5e1de71903e5fd7469e SHA1: cf4def9bb0f958393e36690ecd2d7091faa9aeac MD5sum: f2b952eb7c9177979af2839c14d6ed7a Description: toolbox for vision research -- arch/interpreter independent part Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains architecture independent files (such as .m scripts) Package: python-lazyarray Source: lazyarray Version: 0.1.0-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 19 Depends: neurodebian-popularity-contest, python2.7 | python2.6, python (>= 2.6.6-7~), python (<< 2.8), python-numpy Homepage: http://bitbucket.org/apdavison/lazyarray/ Priority: optional Section: python Filename: pool/main/l/lazyarray/python-lazyarray_0.1.0-1~nd70+1_all.deb Size: 7334 SHA256: 72dadd7fab4a8d37309793af8b50d73a7ea93f6c223509fe58ad502936fa852d SHA1: 3a45ca7b469e524691c3ed6ec708b24bd59391a8 MD5sum: 80d3117e7a8b1fa74d6551c6f2f306ed Description: Python module providing a NumPy-compatible lazily-evaluated array The 'larray' class is a NumPy-compatible numerical array where operations on the array (potentially including array construction) are not performed immediately, but are delayed until evaluation is specifically requested. Evaluation of only parts of the array is also possible. Consequently, use of an 'larray' can potentially save considerable computation time and memory in cases where arrays are used conditionally, or only parts of an array are used (for example in distributed computation, in which each MPI node operates on a subset of the elements of the array). Package: python-nipype Source: nipype Version: 0.5.2-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2243 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-scipy, python-simplejson, python-traits (>= 4.0) | python-traits4, python-nibabel (>= 1.0.0~), python-networkx (>= 1.3), python-cfflib Recommends: ipython, python-nose, graphviz Suggests: fsl, afni, python-nipy, slicer, matlab-spm8, python-pyxnat Provides: python2.6-nipype, python2.7-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: python Filename: pool/main/n/nipype/python-nipype_0.5.2-1~nd70+1_all.deb Size: 500796 SHA256: 9f58ef26d3dd35faf299b07b5c20a0578cc9c84a89ba660f2cf1980534e79fc7 SHA1: cb6f88957da825cb86298e2c275a81d4e5cd50e4 MD5sum: 63b98a531e570d559c52c9fdaaf2a527 Description: Neuroimaging data analysis pipelines in Python Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). Package: python-nipype-doc Source: nipype Version: 0.5.2-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 12077 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: doc Filename: pool/main/n/nipype/python-nipype-doc_0.5.2-1~nd70+1_all.deb Size: 5717502 SHA256: 5c50797c026f9c438bdb463b123aa5f84b2502c16e702f683348b02b47e9b408 SHA1: 83c10e7a6a3b956e5f7685cd61e4b06175aa1f46 MD5sum: 4a8700fdea29ce4365db9d7d9aeec258 Description: Neuroimaging data analysis pipelines in Python -- documentation Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). . This package contains Nipype examples and documentation in various formats. Package: python-pandas Source: pandas Version: 0.7.1+git1-ga2e86c2-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1787 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.6), python-support (>= 0.90.0), python-numpy, python-dateutil, python-pandas-lib (>= 0.7.1+git1-ga2e86c2-1~nd70+1) Recommends: python-scipy, python-matplotlib, python-tables, python-tz, python-xlrd, python-scikits.statsmodels Suggests: python-pandas-doc Provides: python2.6-pandas, python2.7-pandas Homepage: http://pandas.sourceforge.net Priority: optional Section: python Filename: pool/main/p/pandas/python-pandas_0.7.1+git1-ga2e86c2-1~nd70+1_all.deb Size: 399332 SHA256: 6e7fda7a50d5ad6e828c8e7874cd662494c51f7058118960618f751a6ff2a7d7 SHA1: 399f26e248f3694ceedb7ec2a9a270d794c19ead MD5sum: 5f80e595e34be59b3f676191cb99a584 Description: data structures for "relational" or "labeled" data pandas is a Python package providing fast, flexible, and expressive data structures designed to make working with "relational" or "labeled" data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, real world data analysis in Python. pandas is well suited for many different kinds of data: . - Tabular data with heterogeneously-typed columns, as in an SQL table or Excel spreadsheet - Ordered and unordered (not necessarily fixed-frequency) time series data. - Arbitrary matrix data (homogeneously typed or heterogeneous) with row and column labels - Any other form of observational / statistical data sets. The data actually need not be labeled at all to be placed into a pandas data structure Package: python-pynn Source: pynn Version: 0.7.2-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 740 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.6), python-support (>= 0.90.0) Recommends: python-jinja2, python-cheetah Suggests: python-neuron, python-brian, python-csa Homepage: http://neuralensemble.org/trac/PyNN Priority: extra Section: python Filename: pool/main/p/pynn/python-pynn_0.7.2-1~nd70+1_all.deb Size: 183462 SHA256: b2104a7a2a53a3133b55a847c245049d70050730a0af026f597970e9c1e5e9c4 SHA1: e73570a777ccb7586a8797af2fd53ebc8da6161f MD5sum: 1ba1b974ce71976f8c4011edab661d5e Description: simulator-independent specification of neuronal network models PyNN allows for coding a model once and run it without modification on any simulator that PyNN supports (currently NEURON, NEST, PCSIM and Brian). PyNN translates standard cell-model names and parameter names into simulator-specific names. Package: python-quantities Version: 0.10.1-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 323 Depends: neurodebian-popularity-contest, python2.7 | python2.6, python (>= 2.6.6-7~), python (<< 2.8), python-numpy (>= 1.4) Homepage: http://packages.python.org/quantities/ Priority: extra Section: python Filename: pool/main/p/python-quantities/python-quantities_0.10.1-1~nd70+1_all.deb Size: 62650 SHA256: 7105f0be0bad6a6896943c81ffc4f7ebd4e7ce36829bf3747f8fbb603246e059 SHA1: c36035905534efefa681ab02a9b30a297c46c3fc MD5sum: 370baf01ebbe89b0e73e46b3b3dee9e2 Description: Library for computation of physical quantities with units, based on numpy Quantities is designed to handle arithmetic and conversions of physical quantities, which have a magnitude, dimensionality specified by various units, and possibly an uncertainty. Quantities builds on the popular numpy library and is designed to work with numpy ufuncs, many of which are already supported. Package: spm8-common Source: spm8 Version: 8.4667~dfsg.1-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 18467 Depends: neurodebian-popularity-contest Recommends: spm8-data, spm8-doc Priority: extra Section: science Filename: pool/main/s/spm8/spm8-common_8.4667~dfsg.1-1~nd70+1_all.deb Size: 10573708 SHA256: b9d73e662aada20c16796e8e6ba41137f515583735b1363d39f34ead0d3a5d58 SHA1: 88b9a7d192e0f3f63ece738c0b48deac138af2e6 MD5sum: a2572180dac0762b3745f327b9f0cf6a Description: analysis of brain imaging data sequences Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the platform-independent M-files. Package: spm8-data Source: spm8 Version: 8.4667~dfsg.1-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 72987 Depends: neurodebian-popularity-contest Priority: extra Section: science Filename: pool/main/s/spm8/spm8-data_8.4667~dfsg.1-1~nd70+1_all.deb Size: 52167704 SHA256: 9e26016d3833efc3b8b0c669ffc7c4c59a0986f5662a60ea2cf3bf6c6ca1cc53 SHA1: 44e14a239856e82d4a4d5aeff8afe585a0dab35e MD5sum: ba5e3d120390f42444b44ee24f277a62 Description: data files for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provide the data files shipped with the SPM distribution, such as various stereotaxic brain space templates and EEG channel setups. Package: spm8-doc Source: spm8 Version: 8.4667~dfsg.1-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9370 Depends: neurodebian-popularity-contest Priority: extra Section: doc Filename: pool/main/s/spm8/spm8-doc_8.4667~dfsg.1-1~nd70+1_all.deb Size: 8648906 SHA256: d6825506112d61cde6903ce21e5d0d880a714cab6eeed4c160d73c49259a16d8 SHA1: 394d1c423ad8ad1d1f55864a5979248c6a3c65ee MD5sum: ebf90c05e8ed3fd1b7389d0320f2f946 Description: manual for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the SPM manual in PDF format. Package: vtk-doc Source: vtk Version: 5.8.0-7+b0~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 342007 Depends: neurodebian-popularity-contest, doc-base Suggests: libvtk5-dev, vtk-examples, vtkdata Homepage: http://www.vtk.org/ Priority: optional Section: doc Filename: pool/main/v/vtk/vtk-doc_5.8.0-7+b0~nd70+1_all.deb Size: 66709864 SHA256: 1a71117b4f7574428e9da98482fb0c2cb41581e0ca6d2e931ea639a5da51263c SHA1: 74a40de489c5a44161b4aa468547d356da0bf911 MD5sum: 4c9a59935cca888f4c608d56f7eb3213 Description: VTK class reference documentation The Visualization Toolkit (VTK) is an object oriented, high level library that allows one to easily write C++ programs, Tcl, Python and Java scripts that do 3D visualization. . This package contains exhaustive HTML documentation for the all the documented VTK C++ classes. The documentation was generated using doxygen and some excellent perl scripts from Sebastien Barre et. al. Please read the README.docs in /usr/share/doc/vtk-doc/ for details. The documentation is available under /usr/share/doc/vtk/html. Package: vtk-examples Source: vtk Version: 5.8.0-7+b0~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2521 Depends: neurodebian-popularity-contest Suggests: libvtk5-dev, tcl-vtk, python-vtk, vtk-doc, python, tclsh, libqt4-dev Homepage: http://www.vtk.org/ Priority: optional Section: graphics Filename: pool/main/v/vtk/vtk-examples_5.8.0-7+b0~nd70+1_all.deb Size: 578898 SHA256: d070189a36ffd5bed00de02b3c794d0fa8f8bb2765fbc36f0f99c1634cda5ac7 SHA1: 132096d02c71c2f969d9baff0842e4afcdbb501c MD5sum: c018d4c1cace1b218dec239a1cf5e39e Description: C++, Tcl and Python example programs/scripts for VTK The Visualization Toolkit (VTK) is an object oriented, high level library that allows one to easily write C++ programs, Tcl, Python and Java scripts that do 3D visualization. . This package contains examples from the VTK source. To compile the C++ examples you will need to install the vtk-dev package as well. Some of them require the libqt4-dev package. . The Python and Tcl examples can be run with the corresponding packages (python-vtk, tcl-vtk).