Package: aghermann Version: 0.7.1-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1091 Depends: neurodebian-popularity-contest, libc6 (>= 2.8), libcairo2 (>= 1.2.4), libconfig++9, libfftw3-3, libgcc1 (>= 1:4.1.1), libglib2.0-0 (>= 2.31.18), libgomp1 (>= 4.2.1), libgsl0ldbl (>= 1.9), libgtk-3-0 (>= 3.3.16), libitpp7, libpango1.0-0 (>= 1.14.0), libstdc++6 (>= 4.6), libunique-3.0-0 (>= 2.90.1) Suggests: edfbrowser Homepage: http://johnhommer.com/academic/code/aghermann Priority: optional Section: science Filename: pool/main/a/aghermann/aghermann_0.7.1-1~nd12.04+1+nd12.10+1_i386.deb Size: 501070 SHA256: aea3f39c1c5dec435ffce9f3508065ebd6c40808f9ea5eb1897b399663bde822 SHA1: 0885ca5ec542a5b232a421e3c53c593cf583f06d MD5sum: 51d915a0c3c6f5317225ea7f16c004c9 Description: Sleep-research experiment manager Aghermann is a program designed around a common workflow in sleep-research, complete with scoring facility, EEG power spectrum and power course visualization, and Process S simulation following Achermann et al, 1993. Package: biosig-tools Source: biosig4c++ Version: 1.4.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 679 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: science Filename: pool/main/b/biosig4c++/biosig-tools_1.4.1-1~nd12.10+1_i386.deb Size: 286316 SHA256: 9f6a98e7d4e6c3139b6bc1948b4ef9439b384b4ecb7d289dcd06c15212bc6da4 SHA1: da2e87c1116c5e78214441e588bc49946d685332 MD5sum: 532a3a3173f94407a7f6df77d58ae17e Description: format conversion tools for biomedical data formats Based on BioSig library, this package provides command line tools, such as . - save2gdf: converter between different file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF, BDF, CWFB. save2gdf can be also used to upload or retrieve data from a bscs server. Package: cmtk Version: 2.2.6-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 20813 Depends: neurodebian-popularity-contest, libbz2-1.0, libc6 (>= 2.7), libdcmtk2 (>= 3.6.0), libfftw3-3, libgcc1 (>= 1:4.1.1), libgomp1 (>= 4.2.1), libqtcore4 (>= 4:4.6.1), libqtgui4 (>= 4:4.5.3), libsqlite3-0 (>= 3.5.9), libstdc++6 (>= 4.6), zlib1g (>= 1:1.1.4) Recommends: sri24-atlas Suggests: numdiff Homepage: http://www.nitrc.org/projects/cmtk/ Priority: extra Section: science Filename: pool/main/c/cmtk/cmtk_2.2.6-1~nd12.10+1_i386.deb Size: 6096132 SHA256: 0e5f9cb0783efecc8e92133f5787d65628022721bfd2f79b18e378c2941d2cbe SHA1: 7d56078d0d6071a9152a28dc8782ec1be37991c3 MD5sum: 22332c146d2d3bc1384e5ceb97709057 Description: Computational Morphometry Toolkit A software toolkit for computational morphometry of biomedical images, CMTK comprises a set of command line tools and a back-end general-purpose library for processing and I/O. . The command line tools primarily provide the following functionality: registration (affine and nonrigid; single and multi-channel; pairwise and groupwise), image correction (MR bias field estimation; interleaved image artifact correction), processing (filters; combination of segmentations via voting and STAPLE; shape-based averaging), statistics (t-tests; general linear regression). Package: cnrun Version: 1.1.13-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 428 Depends: neurodebian-popularity-contest, libboost-regex1.49.0 (>= 1.49.0-1), libc6 (>= 2.8), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), libreadline6 (>= 6.0), libstdc++6 (>= 4.6), libxml2 (>= 2.6.27) Suggests: gnuplot Homepage: http://johnhommer.com/academic/code/cnrun Priority: optional Section: science Filename: pool/main/c/cnrun/cnrun_1.1.13-1~nd12.04+1+nd12.10+1_i386.deb Size: 175696 SHA256: 2f2e4d23d2e499c21c12a95e630ddf91d073a0308af074a7bb2cdd6aa7095a61 SHA1: 5d41a74c346acd4db35cc96cf143aa0502fe0317 MD5sum: a1285331082b1045fb8e1bfc483f32da Description: NeuroML-capable neuronal network simulator CNrun is a neuronal network model simulator, similar in purpose to NEURON except that individual neurons are not compartmentalised. It can read NeuroML files (e.g., as generated by neuroConstruct); provides a Hodgkin-Huxley neuron (plus some varieties), a Rall and Alpha-Beta synapses, Poisson, Van der Pol, Colpitts oscillators and regular pulse generator; external inputs and logging state variables. Uses a 6-5 Runge-Kutta integration method. Basic scripting and (if run interactively) context-aware autocompletion. Package: condor Version: 7.8.6~dfsg.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 13120 Depends: neurodebian-popularity-contest, debconf (>= 0.5) | debconf-2.0, libc6 (>= 2.7), libclassad3, libcomerr2 (>= 1.01), libcurl3 (>= 7.16.2), libexpat1 (>= 2.0.1), libgcc1 (>= 1:4.1.1), libglobus-common0 (>= 14), libglobus-ftp-control1 (>= 4), libglobus-gass-transfer2 (>= 7), libglobus-gram-client3 (>= 12), libglobus-gsi-credential1 (>= 5), libglobus-gsi-proxy-core0 (>= 6), libglobus-gsi-sysconfig1 (>= 5), libglobus-gss-assist3 (>= 8), libglobus-gssapi-gsi4 (>= 10), libglobus-io3 (>= 9), libglobus-rsl2 (>= 9), libglobus-xio0 (>= 3), libgsoap2, libk5crypto3 (>= 1.6.dfsg.2), libkrb5-3 (>= 1.10+dfsg~), libldap-2.4-2 (>= 2.4.7), libpcre3 (>= 8.10), libssl1.0.0 (>= 1.0.0), libstdc++6 (>= 4.6), libuuid1 (>= 2.16), libvirt0 (>= 0.5.0), python, perl, adduser, libdate-manip-perl Recommends: dmtcp Suggests: coop-computing-tools Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: science Filename: pool/main/c/condor/condor_7.8.6~dfsg.1-1~nd12.10+1_i386.deb Size: 4635844 SHA256: 0cfdb637dd9d1d0d6629e8adf34244443221cfb57ce730112e9fd01fd01112ea SHA1: a743a3f742a5ae3bb45e835d7ed4863803eea3c7 MD5sum: c174a34d1198d2147453f5548e32da0b Description: distributed workload management system Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor; Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing systems, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package can set up an appropriate initial configuration at install time for a machine intended either as a member of an existing Condor pool or as a "Personal" (single machine) Condor pool. Package: condor-dbg Source: condor Version: 7.8.6~dfsg.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 32174 Depends: neurodebian-popularity-contest, condor (= 7.8.6~dfsg.1-1~nd12.10+1) Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: debug Filename: pool/main/c/condor/condor-dbg_7.8.6~dfsg.1-1~nd12.10+1_i386.deb Size: 12090444 SHA256: 35c65d99680ad5d4d230ea24da05d54d8a0f15053a7c038202a9a629027491c8 SHA1: 8cdd1f250c989ec890485b51e8677c207d6f8c4c MD5sum: 723e357409b57a4dd1f0b4afbda0b569 Description: distributed workload management system - debugging symbols Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor; Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing systems, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package provides the debugging symbols for Condor. Package: condor-dev Source: condor Version: 7.8.6~dfsg.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1542 Depends: neurodebian-popularity-contest Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: devel Filename: pool/main/c/condor/condor-dev_7.8.6~dfsg.1-1~nd12.10+1_i386.deb Size: 421572 SHA256: 08d77c060f8b8a0742ddeb8b0170911e780dfadb2225f2b6a4a8bc9035b998bb SHA1: f7bf0f2f8c78d813e23b566045e3231f259cf48c MD5sum: 7c57da1c915e26553a237807791f9be3 Description: distributed workload management system - development files Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor; Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing systems, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package provides headers and libraries for development of Condor add-ons. Package: condor-doc Source: condor Version: 7.8.6~dfsg.1-1~nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 6162 Depends: neurodebian-popularity-contest Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: doc Filename: pool/main/c/condor/condor-doc_7.8.6~dfsg.1-1~nd12.10+1_all.deb Size: 1366096 SHA256: 8e15bde9fcf9281260997edd5b863162eb82d944375d46b34107650250876a9b SHA1: b685be312586eae6b6e7d8e068a62d70c528aac1 MD5sum: 39dd139ebe5243ec2e5bceefa5c4c30d Description: distributed workload management system - documentation Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor; Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing systems, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package provides Condor's documentation in HTML and PDF format, as well as configuration and other examples. Package: debruijn Version: 1.6-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 130 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libfftw3-3, libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1) Homepage: http://www.cfn.upenn.edu/aguirre/wiki/public:de_bruijn_software Priority: extra Section: science Filename: pool/main/d/debruijn/debruijn_1.6-1~nd12.04+1+nd12.10+1_i386.deb Size: 45400 SHA256: d925e5f0f58fec5b5995be2e6af8c5dc955f38de0b108dcdc967ff399daec58d SHA1: e09dce625981ca2d37631736fb58c124fce4388e MD5sum: 18c4bcff9428a26ca5771be2d7640de9 Description: De Bruijn cycle generator Stimulus counter-balance is important for many experimental designs. This command-line software creates De Bruijn cycles, which are pseudo-random sequences with arbitrary levels of counterbalance. "Path-guided" de Bruijn cycles may also be created. These sequences encode a hypothesized neural modulation at specified temporal frequencies, and have enhanced detection power for BOLD fMRI experiments. Package: eeglab11-sampledata Source: eeglab11 Version: 11.0.0.0~b~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8109 Depends: neurodebian-popularity-contest Priority: extra Section: science Filename: pool/main/e/eeglab11/eeglab11-sampledata_11.0.0.0~b~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1_all.deb Size: 7224818 SHA256: 25bbf59e6baaa0fd1f795f650fc89e2fc7f1c9bed1172b1adfe766a6a9b64be4 SHA1: 5b471b69135beae6f699377fdfcb606d1fcb972e MD5sum: dd4f89591443db2aab3bfc912c908f2e Description: sample EEG data for EEGLAB tutorials EEGLAB is sofwware for processing continuous or event-related EEG or other physiological data. . This package provide some tutorial data files shipped with the EEGLAB distribution. Package: eegview Version: 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 19 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libeegdev0, libmcpanel0 (>= 0.0), libxdffileio0 (>= 0.0) Homepage: http://cnbi.epfl.ch/software/eegview.html Priority: extra Section: science Filename: pool/main/e/eegview/eegview_0.0-1~nd11.10+1+nd12.04+1+nd12.10+1_i386.deb Size: 10680 SHA256: 1daf4b7628b9a891f596245f578486247ae010c01ab8436375a61f6652238d65 SHA1: c69b700de197d91ccce2861e55c32b7184d4015b MD5sum: b68b4cc0bec6d1bcca2870eff1fd31cb Description: Software to display EEG data in realtime This software allows one to display EEG signal in realtime as well as record them. It is the minimal recording panel needed to do simple experiment. Package: incf-nidash-oneclick-clients Source: incf-nidash-oneclick Version: 2.0-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 28 Depends: neurodebian-popularity-contest, python (>= 2.5.0), python-dicom, dcmtk, python-httplib2 Homepage: http://xnat.incf.org/ Priority: extra Section: science Filename: pool/main/i/incf-nidash-oneclick/incf-nidash-oneclick-clients_2.0-1~nd12.04+1+nd12.10+1_all.deb Size: 9726 SHA256: 34850e6858d784f40edaa883e66923b867c1262d92203a3ccde4cd38fc505897 SHA1: efa6a60304adb482d61201f9187f1fb23807d12b MD5sum: 0f86d558162919041ff81fb2e7129410 Description: utility for pushing DICOM data to the INCF datasharing server A command line utility for anonymizing and sending DICOM data to the XNAT image database at the International Neuroinformatics Coordinating Facility (INCF). This tool is maintained by the INCF NeuroImaging DataSharing (NIDASH) task force. Package: ipython01x Version: 0.13.1~git33-gcfc5692-2~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4660 Depends: neurodebian-popularity-contest, python-argparse, python-configobj, python-decorator, python-pexpect, python-simplegeneric, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Recommends: python-tornado (>= 2.1.0~), python-pygments, python-qt4, python-zmq, python-matplotlib Suggests: ipython01x-doc, python-gobject, python-gtk2, python-numpy, python-profiler Conflicts: ipython-common, python2.3-ipython, python2.4-ipython Replaces: ipython-common, python2.3-ipython, python2.4-ipython Homepage: http://ipython.org/ Priority: optional Section: python Filename: pool/main/i/ipython01x/ipython01x_0.13.1~git33-gcfc5692-2~nd12.04+1+nd12.10+1_all.deb Size: 1284736 SHA256: b33fe2d592d01644998eb2e3bc890c25603a29cce31206f6f29932415951133f SHA1: 3f4113a83607a389037683969e8caade00a5d669 MD5sum: 473207982d79acf9947e95404ea568d8 Description: enhanced interactive Python shell IPython can be used as a replacement for the standard Python shell, or it can be used as a complete working environment for scientific computing (like Matlab or Mathematica) when paired with the standard Python scientific and numerical tools. It supports dynamic object introspections, numbered input/output prompts, a macro system, session logging, session restoring, complete system shell access, verbose and colored traceback reports, auto-parentheses, auto-quoting, and is embeddable in other Python programs. . This is a non-official, custom build of IPython post 0.11 with notebooks support. It provides IPython01X module thus not conflicting with system-wide installed IPython Package: ipython01x-doc Source: ipython01x Version: 0.13.1~git33-gcfc5692-2~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 16630 Depends: neurodebian-popularity-contest, libjs-jquery, ipython01x Homepage: http://ipython.org/ Priority: optional Section: doc Filename: pool/main/i/ipython01x/ipython01x-doc_0.13.1~git33-gcfc5692-2~nd12.04+1+nd12.10+1_all.deb Size: 7229016 SHA256: 881a444ee2c6d3503358921aaef312a447c836fa73801a27243f5176d13fe5c1 SHA1: 270cbd0fcd103cb0c6d84fcebda1de3932c7865d MD5sum: 444ff6826d670d1fd6f0c4e9589c8109 Description: enhanced interactive Python shell IPython can be used as a replacement for the standard Python shell, or it can be used as a complete working environment for scientific computing (like Matlab or Mathematica) when paired with the standard Python scientific and numerical tools. It supports dynamic object introspections, numbered input/output prompts, a macro system, session logging, session restoring, complete system shell access, verbose and colored traceback reports, auto-parentheses, auto-quoting, and is embeddable in other Python programs. . This package contains the documentation. . This is a non-official, custom build of IPython post 0.11 with workbooks support. It provides IPython01X module thus not conflicting with system-wide installed IPython Package: ipython01x-notebook Source: ipython01x Version: 0.13.1~git33-gcfc5692-2~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython01x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: python Filename: pool/main/i/ipython01x/ipython01x-notebook_0.13.1~git33-gcfc5692-2~nd12.04+1+nd12.10+1_all.deb Size: 902 SHA256: e419ba065e85ef22cd296029af98564adf14a9332999c17c1132e7f5fc77b330 SHA1: de4ee34412823e15deafb6e01dc025ae17acaccf MD5sum: 57ba052dcaa4a910f24812c728bf2cf6 Description: enhanced interactive Python shell -- notebook dummy package This is a dummy package depending on ipython01x which ships notebook functionality inside. It is made so to stay in line to modularization of official ipython package in Debian. There is no real good reason to install this package. Package: ipython01x-parallel Source: ipython01x Version: 0.13.1~git33-gcfc5692-2~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython01x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: oldlibs Filename: pool/main/i/ipython01x/ipython01x-parallel_0.13.1~git33-gcfc5692-2~nd12.04+1+nd12.10+1_all.deb Size: 832 SHA256: 8f7ffeea044193aff74e58faeb12638ee38d92ce5ffa60433676e6deb1139c4a SHA1: cb740b034905cd12baae6ff52893a8d607438878 MD5sum: 1d2333cd5d2fa1b0c083d93ae024d72f Description: enhanced interactive Python shell This is a transitional package and can be safely removed after the installation is complete. Package: ipython01x-qtconsole Source: ipython01x Version: 0.13.1~git33-gcfc5692-2~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython01x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: python Filename: pool/main/i/ipython01x/ipython01x-qtconsole_0.13.1~git33-gcfc5692-2~nd12.04+1+nd12.10+1_all.deb Size: 914 SHA256: 59433b7f7b77e8489e1af4627b2450943ea10ca88105a27835e997d87a450b04 SHA1: b3ba1be85906ebf378047d8c15dae71f8903c66d MD5sum: 79d9cb7a8cf067f2ecd01a9bb5155d52 Description: enhanced interactive Python shell -- notebook dummy package This is a dummy package depending on ipython01x which ships qt console functionality inside. It is made so to stay in line to modularization of the official ipython package in Debian. There is no real good reason to install this package. Package: libbiosig-dev Source: biosig4c++ Version: 1.4.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1338 Depends: neurodebian-popularity-contest, libbiosig1 (= 1.4.1-1~nd12.10+1) Homepage: http://biosig.sf.net/ Priority: extra Section: libdevel Filename: pool/main/b/biosig4c++/libbiosig-dev_1.4.1-1~nd12.10+1_i386.deb Size: 419056 SHA256: 4a594f46b2e1376319058d37b00b6d614bab1a66512d2ddc2c4b8c2fd5433bb3 SHA1: b5ee0a3107e5d56258b89bc800ba020ef036b390 MD5sum: 9170c3017429ef38924acb116c10c41a Description: I/O library for biomedical data - development files BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED . . This package provides header files and static library. Package: libbiosig1 Source: biosig4c++ Version: 1.4.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 811 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1) Homepage: http://biosig.sf.net/ Priority: extra Section: libs Filename: pool/main/b/biosig4c++/libbiosig1_1.4.1-1~nd12.10+1_i386.deb Size: 328976 SHA256: a0edd8007f901da78df0d03ed7016040c654c898791ef7a694370ca39bd05001 SHA1: 0b028a2fbbcb4eb3ef809a629b308fdddd22d094 MD5sum: c61a70e532a704be7d108707f0546a5b Description: I/O library for biomedical data - dynamic library BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED . . This package provides dynamic library. Package: libbiosig1-dbg Source: biosig4c++ Version: 1.4.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 323 Depends: neurodebian-popularity-contest, libbiosig1 (= 1.4.1-1~nd12.10+1) Homepage: http://biosig.sf.net/ Priority: extra Section: debug Filename: pool/main/b/biosig4c++/libbiosig1-dbg_1.4.1-1~nd12.10+1_i386.deb Size: 116966 SHA256: 316b974337afe26876c7580f0a3c822d217b9d0b5ed4df8f2256da6ac6dc06d4 SHA1: dcbab6a3c0523ae243b25b44854271bc9c024ebc MD5sum: a0eea0341a72bf60166db18bc918cc0a Description: I/O library for biomedical data - debug symbols BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED . . This package provides debug symbols. Package: libclassad-dev Source: condor Version: 7.8.6~dfsg.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2162 Depends: neurodebian-popularity-contest, libclassad3 (= 7.8.6~dfsg.1-1~nd12.10+1) Conflicts: libclassad0-dev Replaces: libclassad0-dev Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: libdevel Filename: pool/main/c/condor/libclassad-dev_7.8.6~dfsg.1-1~nd12.10+1_i386.deb Size: 483752 SHA256: 9fb2113f222ae0b7b4d9c8f458d5e6a1c73aa002b7cafc0efc03a3275d6a5ed7 SHA1: 7538fe622990e0e85dbecc92f178c2c0a572c047 MD5sum: 6d2ea44c8d888490a76d4ee75f15fbdc Description: Condor classads expression language - development library Classified Advertisements (classads) are the lingua franca of Condor, used for describing jobs, workstations, and other resources. There is a protocol for evaluating whether two classads match, which is used by the Condor central manager to determine the compatibility of jobs, and workstations where they may be run. . This package provides the static library and header files. Package: libclassad3 Source: condor Version: 7.8.6~dfsg.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 799 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libpcre3 (>= 8.10), libstdc++6 (>= 4.6) Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: science Filename: pool/main/c/condor/libclassad3_7.8.6~dfsg.1-1~nd12.10+1_i386.deb Size: 272326 SHA256: db95d381e3199986ea0fa988c868bc344fe2fc90cefe3e67493c4ab938e1b8ad SHA1: 18f8aabe2d67b7552c9033966e437de310032947 MD5sum: 2ebb6276eeb4e89028ebea486ed18017 Description: Condor classads expression language - runtime library Classified Advertisements (classads) are the lingua franca of Condor, used for describing jobs, workstations, and other resources. There is a protocol for evaluating whether two classads match, which is used by the Condor central manager to determine the compatibility of jobs, and workstations where they may be run. . This package provides the runtime library. Package: libmcpanel-dev Source: mcpanel Version: 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 4 Depends: neurodebian-popularity-contest, libmcpanel0 (= 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1) Homepage: http://cnbi.epfl.ch/software/mcpanel.html Priority: extra Section: libdevel Filename: pool/main/m/mcpanel/libmcpanel-dev_0.0-1~nd11.10+1+nd12.04+1+nd12.10+1_i386.deb Size: 2410 SHA256: e80e03a9ba09142f3e0e3c89beb121a35038ac03dc10cd941009dd80a9ba7b73 SHA1: 06e74477d998cc2830a187424fd51e6d9515e0a5 MD5sum: ec5e66e77a485fe8c0390c6b039a4a47 Description: Library to display multichannel data in realtime (Developement files) This package provides a library written in C implementing a set of widgets designed to view in realtime multichannels signals. Despite it has been initially design to view signals coming from a BIOSEMI Activetwo EEG system, it is totally system agnostic and any user of other system might find it useful. . This package contains the files needed to compile and link programs which use mcpanel Package: libmcpanel0 Source: mcpanel Version: 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 135 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libgdk-pixbuf2.0-0 (>= 2.22.0), libglib2.0-0 (>= 2.31.8), libgtk2.0-0 (>= 2.14.0), libpango1.0-0 (>= 1.14.0), librtfilter1 (>= 1.0) Homepage: http://cnbi.epfl.ch/software/mcpanel.html Priority: extra Section: libs Filename: pool/main/m/mcpanel/libmcpanel0_0.0-1~nd11.10+1+nd12.04+1+nd12.10+1_i386.deb Size: 48848 SHA256: 8914b0d5f4a3198b317cd62e28078a2c04d2f6aaa7a60eeaef5dab9ce5537fa7 SHA1: 0880f21d0af62b0fc98eef2838db10eacb5c2bac MD5sum: 1125ab4d00d94b29a717e7275fbbc220 Description: Library to display multichannel data in realtime This package provides a library written in C implementing a set of widgets designed to view in realtime multichannels signals. Despite it has been initially design to view signals coming from a BIOSEMI Activetwo EEG system, it is totally system agnostic and any user of other system might find it useful. Package: libmcpanel0-dbg Source: mcpanel Version: 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 16 Depends: neurodebian-popularity-contest, libmcpanel0 (= 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1) Homepage: http://cnbi.epfl.ch/software/mcpanel.html Priority: extra Section: debug Filename: pool/main/m/mcpanel/libmcpanel0-dbg_0.0-1~nd11.10+1+nd12.04+1+nd12.10+1_i386.deb Size: 6614 SHA256: 3eb2574d471d8f58c93ccce16ae047709eb444f30e83341d09395dd3be9be760 SHA1: f77dee35467bc432f459801b957f051c404326f5 MD5sum: c7449a4adabe2e3ddea80e6a2b30c8c1 Description: Library to display multichannel data in realtime (Debugging symbols) This package provides a library written in C implementing a set of widgets designed to view in realtime multichannels signals. Despite it has been initially design to view signals coming from a BIOSEMI Activetwo EEG system, it is totally system agnostic and any user of other system might find it useful. . This package contains the debugging information of the library. Package: libvrpn-dev Source: vrpn Version: 07.30+dfsg-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 659 Depends: neurodebian-popularity-contest, libvrpn0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1), libvrpnserver0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1) Homepage: http://www.cs.unc.edu/Research/vrpn/ Priority: extra Section: libdevel Filename: pool/main/v/vrpn/libvrpn-dev_07.30+dfsg-1~nd12.04+1+nd12.10+1_i386.deb Size: 174136 SHA256: 88f1c52922d593ccb7c752d71b236c10eea8f7ed729485a965155c41957ca47a SHA1: 2b84aff1974ff9c15f8d8cabbe9239afe6b75358 MD5sum: 111af6b6ed4954b4bb63c3598a4d44f6 Description: Virtual Reality Peripheral Network (development files) The Virtual-Reality Peripheral Network (VRPN) is a set of classes within a library and a set of servers that are designed to implement a network-transparent interface between application programs and the set of physical devices (tracker, etc.) used in a virtual-reality (VR) system. The idea is to have a PC or other host at each VR station that controls the peripherals (tracker, button device, haptic device, analog inputs, sound, etc). VRPN provides connections between the application and all of the devices using the appropriate class-of-service for each type of device sharing this link. The application remains unaware of the network topology. Note that it is possible to use VRPN with devices that are directly connected to the machine that the application is running on, either using separate control programs or running all as a single program. . This package contains the development files Package: libvrpn0 Source: vrpn Version: 07.30+dfsg-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 510 Depends: neurodebian-popularity-contest, libc6 (>= 2.15), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1) Homepage: http://www.cs.unc.edu/Research/vrpn/ Priority: extra Section: libs Filename: pool/main/v/vrpn/libvrpn0_07.30+dfsg-1~nd12.04+1+nd12.10+1_i386.deb Size: 184582 SHA256: 8af5c055aac4b43bc46bf9a0d3eb8b6f77d11978ed2229c062937c2c9b005232 SHA1: 0b73057f26307adae6d1cea45594a77eebd5c43d MD5sum: d6aae564e391f07258a66b50daeedc0b Description: Virtual Reality Peripheral Network (client library) The Virtual-Reality Peripheral Network (VRPN) is a set of classes within a library and a set of servers that are designed to implement a network-transparent interface between application programs and the set of physical devices (tracker, etc.) used in a virtual-reality (VR) system. The idea is to have a PC or other host at each VR station that controls the peripherals (tracker, button device, haptic device, analog inputs, sound, etc). VRPN provides connections between the application and all of the devices using the appropriate class-of-service for each type of device sharing this link. The application remains unaware of the network topology. Note that it is possible to use VRPN with devices that are directly connected to the machine that the application is running on, either using separate control programs or running all as a single program. . This package contains the client shared library Package: libvrpnserver0 Source: vrpn Version: 07.30+dfsg-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1214 Depends: neurodebian-popularity-contest, libc6 (>= 2.15), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.cs.unc.edu/Research/vrpn/ Priority: extra Section: libs Filename: pool/main/v/vrpn/libvrpnserver0_07.30+dfsg-1~nd12.04+1+nd12.10+1_i386.deb Size: 425924 SHA256: 40034718348e24e1873fcb31405b01bd2073cb3a2b67f9a8126fe51b70190445 SHA1: cdcee92875c99cd852c6ed8b33ae3b6926804241 MD5sum: 8d319003baf5d02552a2a5c6f9714533 Description: Virtual Reality Peripheral Network (server library) The Virtual-Reality Peripheral Network (VRPN) is a set of classes within a library and a set of servers that are designed to implement a network-transparent interface between application programs and the set of physical devices (tracker, etc.) used in a virtual-reality (VR) system. The idea is to have a PC or other host at each VR station that controls the peripherals (tracker, button device, haptic device, analog inputs, sound, etc). VRPN provides connections between the application and all of the devices using the appropriate class-of-service for each type of device sharing this link. The application remains unaware of the network topology. Note that it is possible to use VRPN with devices that are directly connected to the machine that the application is running on, either using separate control programs or running all as a single program. . This package contains the shared library use in the VRPN server Package: mricron Version: 0.20120505.1~dfsg.1-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 14995 Depends: neurodebian-popularity-contest, libatk1.0-0 (>= 1.12.4), libc6 (>= 2.3.6-6~), libcairo2 (>= 1.2.4), libgdk-pixbuf2.0-0 (>= 2.22.0), libglib2.0-0 (>= 2.12.0), libgtk2.0-0 (>= 2.24.0), libpango1.0-0 (>= 1.14.0), libx11-6, mricron-data Suggests: mricron-doc, fsl Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: science Filename: pool/main/m/mricron/mricron_0.20120505.1~dfsg.1-1~nd12.04+1+nd12.10+1_i386.deb Size: 5785810 SHA256: 7c0adc47b7f61853304ac5e15bb1f9def5e9de0790dc4cbaf7f3e774666e6da3 SHA1: cf0d81212fb2fb5aae253c10d4f9ce74d5938981 MD5sum: 741b5a649ca94f35f58bd4e6b9e4e3a6 Description: magnetic resonance image conversion, viewing and analysis This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . In addition to 'mricron', this package also provides 'dcm2nii' that supports converting DICOM and PAR/REC images into the NIfTI format, and 'npm' for non-parametric data analysis. Package: mricron-data Source: mricron Version: 0.20120505.1~dfsg.1-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1678 Depends: neurodebian-popularity-contest Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: science Filename: pool/main/m/mricron/mricron-data_0.20120505.1~dfsg.1-1~nd12.04+1+nd12.10+1_all.deb Size: 1664034 SHA256: 67d11d7a26ee669ce218dec8dedd8de442fcc302031ec0801be4f0a36eaf5428 SHA1: 92e4e8dc8cb2c36ee9f5b889b7596f48d8daadf5 MD5sum: 8fa66eab66da9d13c81f4c66008b472a Description: data files for MRIcron This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . This package provides data files for MRIcron, such as brain atlases, anatomy, and color schemes. Package: mricron-doc Source: mricron Version: 0.20120505.1~dfsg.1-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 979 Depends: neurodebian-popularity-contest Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: doc Filename: pool/main/m/mricron/mricron-doc_0.20120505.1~dfsg.1-1~nd12.04+1+nd12.10+1_all.deb Size: 735764 SHA256: adf029ff7c6e162ead06e7cafca311ac7780e43b95dcb97d3f4d5000ab6d4f3e SHA1: ec103ce1298820abe5e9962ed4d42e07dc7cd8d5 MD5sum: f4300f300106bdebf22685ddda9e4078 Description: data files for MRIcron This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . This package provides documentation for MRIcron in HTML format. Package: neurodebian-desktop Source: neurodebian Version: 0.29~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 141 Depends: ssh-askpass-gnome | ssh-askpass, desktop-base, gnome-icon-theme, neurodebian-popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-desktop_0.29~nd12.04+1+nd12.10+1_all.deb Size: 114562 SHA256: 32062fe00ad2ff0b3f8e6a531377bf28b4c0dad0c5ec613e8346566215ca5742 SHA1: e7ae797f8b7f2af5d37adef311914d4d3993d8cb MD5sum: 5c15304c2d12f47d70376e1e8f834739 Description: neuroscience research environment This package contains NeuroDebian artwork (icons, background image) and a NeuroDebian menu featuring most popular neuroscience tools automatically installed upon initial invocation. Package: neurodebian-dev Source: neurodebian Version: 0.29~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5748 Depends: devscripts, cowbuilder, neurodebian-keyring Recommends: python, zerofree, moreutils, time, ubuntu-keyring, debian-archive-keyring Suggests: virtualbox-ose, virtualbox-ose-fuse Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-dev_0.29~nd12.04+1+nd12.10+1_all.deb Size: 5346754 SHA256: 406c53d692181cb734d1cf80188366079184148f47c9e581383e7d593a2d18bd SHA1: 0d1bd090825e5c4a0843af30e5433bbaf6b9f54e MD5sum: 34027c8b2eb10238f4efef375f676f0e Description: NeuroDebian development tools neuro.debian.net sphinx website sources and development tools used by NeuroDebian to provide backports for a range of Debian/Ubuntu releases. Package: neurodebian-guest-additions Source: neurodebian Version: 0.29~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 106 Pre-Depends: virtualbox-ose-guest-utils, virtualbox-ose-guest-x11, virtualbox-ose-guest-dkms Depends: sudo, neurodebian-desktop, gdm | gdm3, update-manager-gnome, update-notifier Recommends: chromium-browser Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-guest-additions_0.29~nd12.04+1+nd12.10+1_all.deb Size: 14288 SHA256: 866702960f9ed6d2731f3107d84a8db4d52b21f8fd0fe56013e081c0e656c966 SHA1: 6a4fa09c4b33d2a7e0d8445b9bd4867a120003ef MD5sum: 0f8d252eb47e08ba20035796dc1b1aa9 Description: NeuroDebian guest additions (DO NOT INSTALL OUTSIDE VIRTUALBOX) This package configures a Debian installation as a guest operating system in a VirtualBox-based virtual machine for NeuroDebian. . DO NOT install this package unless you know what you are doing! For example, installation of this package relaxes several security mechanisms. Package: neurodebian-keyring Source: neurodebian Version: 0.29~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 7 Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-keyring_0.29~nd12.04+1+nd12.10+1_all.deb Size: 6970 SHA256: 85fe1f50f0bc80dba7b7f65502128aba04cf1442ea3b8cea89605ad22c9b317f SHA1: 9a70125a1cca8ff830854548ead84b2987e3b77f MD5sum: ef08f25b0a9624afecdda0d9490dd8cb Description: GnuPG archive keys of the NeuroDebian archive The NeuroDebian project digitally signs its Release files. This package contains the archive keys used for that. Package: neurodebian-popularity-contest Source: neurodebian Version: 0.29~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 6 Depends: popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-popularity-contest_0.29~nd12.04+1+nd12.10+1_all.deb Size: 6140 SHA256: 0fa222006537a1b517ed356efdebe755272476ca9910ec8b43e838eea9ac2bc8 SHA1: fa9cf85cae6ea3d90c86ac5ac31bf85140d2b0ff MD5sum: 60adf40efe4c5d4cf7eecde6101df637 Description: Helper for NeuroDebian popularity contest submissions This package is a complement to the generic popularity-contest package to enable anonymous submission of usage statistics to NeuroDebian in addition to the popcon submissions to the underlying distribution (e.g. Debian or Ubuntu) popcon server. . Your participation in popcon is important for following reasons: - Popular packages receive more attention from developers, bugs are fixed faster and updates are provided quicker. - Assure that we do not drop support for a previous release of Debian or Ubuntu while are active users. - User statistics could be used by upstream research software developers to acquire funding for continued development. . It has an effect only if you have decided to participate in the Popularity Contest of your distribution, i.e. Debian or Ubuntu. You can always enable or disable your participation in popcon by running 'dpkg-reconfigure popularity-contest' as root. Package: nifti2dicom Version: 0.4.5-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2063 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgdcm2.2, libinsighttoolkit3.20, libstdc++6 (>= 4.6), nifti2dicom-data (= 0.4.5-1~nd12.04+1+nd12.10+1) Homepage: https://github.com/biolab-unige/nifti2dicom Priority: optional Section: science Filename: pool/main/n/nifti2dicom/nifti2dicom_0.4.5-1~nd12.04+1+nd12.10+1_i386.deb Size: 468774 SHA256: e19ca897f08d23566dc3d861831bfa547121696c6e957af782206579853a48f2 SHA1: bb91cc4f567886e7f12a55b16f283f4473bca068 MD5sum: e4ce5403a7d8f063513b0529c97fbee2 Description: convert 3D medical images to DICOM 2D series Nifti2Dicom is a convertion tool that converts 3D NIfTI files (and other formats supported by ITK, including Analyze, MetaImage Nrrd and VTK) to DICOM. Unlike other conversion tools, it can import a DICOM file that is used to import the patient and study DICOM tags, and allows you to edit the accession number and other DICOM tags, in order to create a valid DICOM that can be imported in a PACS. . This package includes the command line tools. Package: nifti2dicom-data Source: nifti2dicom Version: 0.4.5-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 606 Depends: neurodebian-popularity-contest Homepage: https://github.com/biolab-unige/nifti2dicom Priority: optional Section: science Filename: pool/main/n/nifti2dicom/nifti2dicom-data_0.4.5-1~nd12.04+1+nd12.10+1_all.deb Size: 615000 SHA256: 272ed3d474a443b383fc5f818890d71d703a6860d58ab6fad247607126fe0442 SHA1: a1e46e31f600d80a861cc6fe5af6a78182b356e6 MD5sum: 61cff1026ec14a6dca81be2aef8d6fe3 Description: data files for nifti2dicom This package contains architecture-independent supporting data files required for use with nifti2dicom, such as such as documentation, icons, and translations. Package: nuitka Version: 0.3.25+ds-1~nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1377 Depends: neurodebian-popularity-contest, g++-4.6 (>= 4.6.1) | g++-4.5 | clang (>= 3.0), scons (>= 2.0.0), python-dev (>= 2.6.6-2), python (>= 2.7.1-0ubuntu2) Recommends: python-lxml (>= 2.3), python-qt4 (>= 4.8.6) Suggests: ccache Homepage: http://nuitka.net Priority: optional Section: python Filename: pool/main/n/nuitka/nuitka_0.3.25+ds-1~nd12.10+1_all.deb Size: 349442 SHA256: b4323504302b965a3d1a75bc4559bd887afe9cee706212233a4811a4899abca6 SHA1: cfa3e917a94f1194fcb9bb5b1730a0ef3357f06e MD5sum: bbfbbc29b39c82d5a194604c9c2240de Description: Python compiler with full language support and CPython compatibility This Python compiler achieves full language compatibility and compiles Python code into compiled objects that are not second class to pure Python objects at all. Package: octave-biosig Source: biosig4c++ Version: 1.4.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 66 Depends: neurodebian-popularity-contest, octave (>= 3.4.3-1~), libbiosig1, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), liboctave1 Homepage: http://biosig.sf.net/ Priority: extra Section: science Filename: pool/main/b/biosig4c++/octave-biosig_1.4.1-1~nd12.10+1_i386.deb Size: 23502 SHA256: af3f34a4df6c377beb8a5ee8b3ab3be121df971c516eb77eeadbb9dbfbe6052b SHA1: ee1195a8ff4cc9d1d9837bfc884e83cfb8c3dfdc MD5sum: cf256be89469654a413f1bb7aec3497e Description: Octave bindings for BioSig library This package provides Octave bindings for BioSig library. Primary goal -- I/O interface to variety of biomedical file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF. Package: octave-psychtoolbox-3 Source: psychtoolbox-3 Version: 3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2405 Depends: neurodebian-popularity-contest, octave (>= 3.4.3-1~), freeglut3, libasound2 (>= 1.0.16), libc6 (>= 2.7), libdc1394-22, libfreenect0.1 (>= 1:0.1.1), libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglew1.8 (>= 1.8.0), libglib2.0-0 (>= 2.12.0), libglu1-mesa | libglu1, libgstreamer-plugins-base0.10-0 (>= 0.10.23), libgstreamer0.10-0 (>= 0.10.24), liboctave1, libopenal1 (>= 1:1.13), libpciaccess0 (>= 0.8.0+git20071002), libstdc++6 (>= 4.1.1), libusb-1.0-0 (>= 2:1.0.8), libx11-6 (>= 2:1.2.99.901), libxi6 (>= 2:1.2.99.4), libxrandr2 (>= 2:1.2.99.3), libxxf86vm1, psychtoolbox-3-common (= 3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1), psychtoolbox-3-lib (= 3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1) Recommends: octave-audio, octave-image, octave-optim, octave-signal, octave-statistics Provides: psychtoolbox, psychtoolbox-3 Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/octave-psychtoolbox-3_3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1_i386.deb Size: 829728 SHA256: a7b9ccb86675a243317b4b512297b51581fc6e92f71b593d80a9580a0ac11d47 SHA1: 6dd340b7e2897714bed6bfab71fbeffaa23c9d11 MD5sum: 12c20e44bc8870980ce1dd8d444a7edb Description: toolbox for vision research -- Octave bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains bindings for Octave. Package: opensesame Version: 0.25-1~nd11.10+1+nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4136 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-qt4, python-pygame (>= 1.8.1~), python-numpy (>= 1.3.0~), python-qscintilla2 Recommends: python-serial (>= 2.3~), psychopy (>= 1.64.0), python-pyaudio (>= 0.2.4), python-imaging (>= 1.1.7), python-opengl (>= 3.0.1) Homepage: http://www.cogsci.nl/software/opensesame Priority: extra Section: science Filename: pool/main/o/opensesame/opensesame_0.25-1~nd11.10+1+nd12.04+1+nd12.10+1_all.deb Size: 2839210 SHA256: 6ade3c8a844117b6969e4109d786d88a82909f659ef3734b82de0048c4293c03 SHA1: 6d74ddaeaf8a74342ec4de39244cf5564860a66e MD5sum: 1ee444df1bc05108060f211f466a91dd Description: graphical experiment builder for the social sciences This graphical environment provides an easy to use, point-and-click interface for creating psychological experiments. In addition to a powerful sketchpad for creating visual stimuli, OpenSesame features a sampler and synthesizer for sound playback. For more complex tasks, OpenSesame supports Python scripting using the built-in editor with syntax highlighting. Python-Version: 2.7 Package: psychopy Version: 1.74.03.dfsg-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5203 Depends: neurodebian-popularity-contest, python (>= 2.4), python-support (>= 0.90.0), python-pyglet | python-pygame, python-opengl, python-numpy, python-scipy, python-matplotlib, python-lxml, python-configobj Recommends: python-wxgtk2.8, python-pyglet, python-pygame, python-openpyxl, python-imaging, python-serial, libavbin0, ipython Suggests: python-iolabs, python-pyxid Homepage: http://www.psychopy.org Priority: optional Section: science Filename: pool/main/p/psychopy/psychopy_1.74.03.dfsg-1~nd12.04+1+nd12.10+1_all.deb Size: 3102320 SHA256: 825080ff79bbbd5ac1ea5e58a979acf4e351e753d2e9b38328caea762bf65e18 SHA1: 72f3982ab85940d99481d52b50a98f902131f22e MD5sum: 59edb5e68abec01737402c6ffc8761c8 Description: environment for creating psychology stimuli in Python PsychoPy provides an environment for creating psychology stimuli using Python scripting language. It combines the graphical strengths of OpenGL with easy Python syntax to give psychophysics a free and simple stimulus presentation and control package. . The goal is to provide, for the busy scientist, tools to control timing and windowing and a simple set of pre-packaged stimuli and methods. PsychoPy features . - IDE GUI for coding in a powerful scripting language (Python) - Builder GUI for rapid development of stimulation sequences - Use of hardware-accelerated graphics (OpenGL) - Integration with Spectrascan PR650 for easy monitor calibration - Simple routines for staircase and constant stimuli experimental methods as well as curve-fitting and bootstrapping - Simple (or complex) GUIs via wxPython - Easy interfaces to joysticks, mice, sound cards etc. via PyGame - Video playback (MPG, DivX, AVI, QuickTime, etc.) as stimuli Python-Version: 2.7 Package: psychtoolbox-3-common Source: psychtoolbox-3 Version: 3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 47050 Depends: neurodebian-popularity-contest Recommends: subversion Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-common_3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1_all.deb Size: 19434084 SHA256: 8ecf9cd9d55ef7201eda01b7238df269c520192b5caa638dcebb9051fb58cc30 SHA1: d80cc6b6ad02dd9a8519f5ca5dda158f0a8e3522 MD5sum: b466f1367795115bfacf30664b07e9d5 Description: toolbox for vision research -- arch/interpreter independent part Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains architecture independent files (such as .m scripts) Package: psychtoolbox-3-dbg Source: psychtoolbox-3 Version: 3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2256 Depends: neurodebian-popularity-contest, octave-psychtoolbox-3 (= 3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1) Homepage: http://psychtoolbox.org Priority: extra Section: debug Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-dbg_3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1_i386.deb Size: 826808 SHA256: df7d47586f232344246b84649479a4da32d52e2352767e2864973d6caa1da6e0 SHA1: 4545e117c08f8f1a194015204b1ae87060d96d6a MD5sum: 1d3a13e0d3816d6d2075db047d453c27 Description: toolbox for vision research -- debug symbols for binaries Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . To ease debugging and troubleshooting this package contains debug symbols for Octave bindings and other binaries. Package: psychtoolbox-3-lib Source: psychtoolbox-3 Version: 3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 235 Depends: neurodebian-popularity-contest, libc6 (>= 2.1.3), libfontconfig1 (>= 2.9.0), libfreetype6 (>= 2.2.1), libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libstdc++6 (>= 4.6) Recommends: gstreamer0.10-plugins-base, gstreamer0.10-plugins-good Suggests: gstreamer0.10-plugins-bad, gstreamer0.10-plugins-ugly Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-lib_3.0.9+svn2579.dfsg1-1~nd12.04+1+nd12.10+1_i386.deb Size: 121020 SHA256: 88d3a08454eadef2101295e27823f92d0250836fecdf14f45811a3a3d6a920f2 SHA1: 39c199d0b526759a5aec3ba77806ca6e2f766fe6 MD5sum: 92e4e14424e15725e9352a84df821634 Description: toolbox for vision research -- arch-specific parts Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains additional binaries (tools/dynamic libraries) used by both Octave and Matlab frontends. Package: python-biosig Source: biosig4c++ Version: 1.4.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 190 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.6.1), python-numpy-abi9, python-support (>= 0.90.0), libbiosig1, libc6 (>= 2.4), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libpython2.7 (>= 2.7), libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: python Filename: pool/main/b/biosig4c++/python-biosig_1.4.1-1~nd12.10+1_i386.deb Size: 55296 SHA256: cf7d2053f8550d95c4b885fbb6e2ab8e2612a6ebf09127de31995cdb4ad3dc1d SHA1: 66179253e6cffedeceeb1027905a55779b07e7bd MD5sum: 8845a0614fcb558619dfe3ed7d93e32f Description: Python bindings for BioSig library This package provides Python bindings for BioSig library. Primary goal -- I/O interface to variety of biomedical file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF. Package: python-brian Source: brian Version: 1.4.0-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2139 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-brian-lib (>= 1.4.0-1~nd12.04+1+nd12.10+1), python-matplotlib (>= 0.90.1), python-numpy (>= 1.3.0), python-scipy (>= 0.7.0) Recommends: python-sympy Suggests: python-brian-doc, python-nose, python-cherrypy Homepage: http://www.briansimulator.org/ Priority: extra Section: python Filename: pool/main/b/brian/python-brian_1.4.0-1~nd12.04+1+nd12.10+1_all.deb Size: 503240 SHA256: 51357e842efadc5bb97f1842c7b5269fed5e668a6d5d9f89550d2ac2d624ac0a SHA1: d2bb4f2f816f32e4c53b01ce1e336d717daebed8 MD5sum: 18ef5b7b8eb127e34855a44fec92fe1a Description: simulator for spiking neural networks Brian is a clock-driven simulator for spiking neural networks. It is designed with an emphasis on flexibility and extensibility, for rapid development and refinement of neural models. Neuron models are specified by sets of user-specified differential equations, threshold conditions and reset conditions (given as strings). The focus is primarily on networks of single compartment neuron models (e.g. leaky integrate-and-fire or Hodgkin-Huxley type neurons). Features include: - a system for specifying quantities with physical dimensions - exact numerical integration for linear differential equations - Euler, Runge-Kutta and exponential Euler integration for nonlinear differential equations - synaptic connections with delays - short-term and long-term plasticity (spike-timing dependent plasticity) - a library of standard model components, including integrate-and-fire equations, synapses and ionic currents - a toolbox for automatically fitting spiking neuron models to electrophysiological recordings Package: python-brian-doc Source: brian Version: 1.4.0-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 6133 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-brian Homepage: http://www.briansimulator.org/ Priority: extra Section: doc Filename: pool/main/b/brian/python-brian-doc_1.4.0-1~nd12.04+1+nd12.10+1_all.deb Size: 2179816 SHA256: c3a02bcfbbe6eff889c509b8b261d4c32759d7c5801ef546b02113cd520cd0dc SHA1: 44477ae2af4a058ea08c193390b55a6198ad990e MD5sum: 63863d69005f9f9ab8cee59d40c71fd8 Description: simulator for spiking neural networks - documentation Brian is a clock-driven simulator for spiking neural networks. . This package provides user's manual (in HTML format), examples and demos. Package: python-brian-lib Source: brian Version: 1.4.0-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 144 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.6.1), python-numpy-abi9, python-support (>= 0.90.0), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.briansimulator.org/ Priority: extra Section: python Filename: pool/main/b/brian/python-brian-lib_1.4.0-1~nd12.04+1+nd12.10+1_i386.deb Size: 56042 SHA256: 2aafd8bc2572802e0b6f6413b59241e1f9c83840cc32385e3412895aaf1313fb SHA1: 1b0b9e8c98095ea68f26422b9af11fa0b98761c6 MD5sum: b9d2bba19b310178740f80b709339707 Description: simulator for spiking neural networks -- extensions Brian is a clock-driven simulator for spiking neural networks. . This package provides Python binary extensions. Package: python-dicom Source: pydicom Version: 0.9.7-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1790 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Recommends: python-numpy, python-imaging Suggests: python-matplotlib Homepage: http://code.google.com/p/pydicom/ Priority: optional Section: python Filename: pool/main/p/pydicom/python-dicom_0.9.7-1~nd12.04+1+nd12.10+1_all.deb Size: 419248 SHA256: f3f77a173128d07565fa883296bb7e2e6ac71c2c063503b35dd203af84045cc3 SHA1: 4cb7eb491eb9c51dfffa5af9f9c962df613bc137 MD5sum: 843bc43a1ba02475ab7b61e3ca6ceb07 Description: DICOM medical file reading and writing pydicom is a pure Python module for parsing DICOM files. DICOM is a standard (http://medical.nema.org) for communicating medical images and related information such as reports and radiotherapy objects. . pydicom makes it easy to read DICOM files into natural pythonic structures for easy manipulation. Modified datasets can be written again to DICOM format files. Package: python-joblib Source: joblib Version: 0.6.5-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 175 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0) Recommends: python-numpy, python-nose, python-simplejson Homepage: http://packages.python.org/joblib/ Priority: optional Section: python Filename: pool/main/j/joblib/python-joblib_0.6.5-1~nd12.04+1+nd12.10+1_all.deb Size: 52690 SHA256: 7cdd6f6998be06124635d64c1993ec41abc7520c83d71a6de17cd104833a6fdc SHA1: 9f19da28d98df6a76983d00eb64b3b6de2f9f8f6 MD5sum: 408d1245807b0d85afdbb3aa835bfc4b Description: tools to provide lightweight pipelining in Python Joblib is a set of tools to provide lightweight pipelining in Python. In particular, joblib offers: - transparent disk-caching of the output values and lazy re-evaluation (memoize pattern) - easy simple parallel computing - logging and tracing of the execution . Joblib is optimized to be fast and robust in particular on large, long-running functions and has specific optimizations for numpy arrays. Package: python-mpi4py Source: mpi4py Version: 1.3+hg20120611-2~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1357 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libopenmpi1.3, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), mpi-default-bin Suggests: python-numpy Homepage: http://code.google.com/p/mpi4py/ Priority: extra Section: python Filename: pool/main/m/mpi4py/python-mpi4py_1.3+hg20120611-2~nd12.10+1_i386.deb Size: 434332 SHA256: 72de93215304b4a5026d0f3027683f46a7b1a9f0bb6d495ff88558575c98afb5 SHA1: ef6f80e3e48e742e18f443ed1c2213e129a9ccdd MD5sum: 4571b8259e0ec9d2e48fd9f5d5a532d2 Description: bindings of the Message Passing Interface (MPI) standard MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. . mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an object oriented interface which closely follows MPI-2 C++ bindings. It supports point-to-point (sends, receives) and collective (broadcasts, scatters, gathers) communications of any picklable Python object as well as optimized communications of Python object exposing the single-segment buffer interface (NumPy arrays, builtin bytes/string/array objects). Package: python-mpi4py-dbg Source: mpi4py Version: 1.3+hg20120611-2~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2814 Depends: neurodebian-popularity-contest, python-mpi4py (= 1.3+hg20120611-2~nd12.10+1) Homepage: http://code.google.com/p/mpi4py/ Priority: extra Section: debug Filename: pool/main/m/mpi4py/python-mpi4py-dbg_1.3+hg20120611-2~nd12.10+1_i386.deb Size: 973542 SHA256: f99165a33103c7f7269b050f9b5849045d617487288db3aa1661cff5ea88eeaf SHA1: b4b043ed55af9ee2d1d7e12ab42a711198e45707 MD5sum: 0b4b20d22ab3df7ec66ed1f867e9856a Description: bindings of the MPI standard -- debug symbols MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. . mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an object oriented interface which closely follows MPI-2 C++ bindings. It supports point-to-point (sends, receives) and collective (broadcasts, scatters, gathers) communications of any picklable Python object as well as optimized communications of Python object exposing the single-segment buffer interface (NumPy arrays, builtin bytes/string/array objects). . This package provides debug symbols. Package: python-mpi4py-doc Source: mpi4py Version: 1.3+hg20120611-2~nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 284 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-mpi4py Homepage: http://code.google.com/p/mpi4py/ Priority: extra Section: doc Filename: pool/main/m/mpi4py/python-mpi4py-doc_1.3+hg20120611-2~nd12.10+1_all.deb Size: 82524 SHA256: a71a3e30acd4ca335666f96ef827fdca039a1873e8a2dd45f579aed595d561ec SHA1: b3b21af55fab7ce1775ba864328d0023b53af1a2 MD5sum: 305217a25234435dd5ae7761c214dee8 Description: bindings of the MPI standard -- documentation MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. . mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an object oriented interface which closely follows MPI-2 C++ bindings. It supports point-to-point (sends, receives) and collective (broadcasts, scatters, gathers) communications of any picklable Python object as well as optimized communications of Python object exposing the single-segment buffer interface (NumPy arrays, builtin bytes/string/array objects). . This package provides HTML rendering of the user's manual. Package: python-mvpa2 Source: pymvpa2 Version: 2.2.0-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4241 Depends: neurodebian-popularity-contest, python (>= 2.4), python-numpy, python-support (>= 0.90.0), python-mvpa2-lib (>= 2.2.0-1~nd12.04+1+nd12.10+1) Recommends: python-h5py, python-lxml, python-matplotlib, python-mdp, python-nibabel, python-psutil, python-psyco, python-pywt, python-reportlab, python-scipy, python-sklearn, shogun-python-modular, liblapack-dev Suggests: fslview, fsl, python-mvpa2-doc, python-nose, python-openopt, python-rpy2 Provides: python2.7-mvpa2 Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa2/python-mvpa2_2.2.0-1~nd12.04+1+nd12.10+1_all.deb Size: 2399986 SHA256: e77909b0dccaa44717beab4afe9e83c2c86ff46d9197e562ed27fcca4aca0f22 SHA1: f49f7edfd5c1c294464b7c97cd3243748aa118a9 MD5sum: 7240798423edc4a1d318d8aa34a9d3c0 Description: multivariate pattern analysis with Python v. 2 PyMVPA eases pattern classification analyses of large datasets, with an accent on neuroimaging. It provides high-level abstraction of typical processing steps (e.g. data preparation, classification, feature selection, generalization testing), a number of implementations of some popular algorithms (e.g. kNN, Ridge Regressions, Sparse Multinomial Logistic Regression), and bindings to external machine learning libraries (libsvm, shogun). . While it is not limited to neuroimaging data (e.g. fMRI, or EEG) it is eminently suited for such datasets. . This is a package of PyMVPA v.2. Previously released stable version is provided by the python-mvpa package. Python-Version: 2.7 Package: python-mvpa2-doc Source: pymvpa2 Version: 2.2.0-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 17215 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Suggests: python-mvpa2, python-mvpa2-tutorialdata, ipython-notebook Homepage: http://www.pymvpa.org Priority: optional Section: doc Filename: pool/main/p/pymvpa2/python-mvpa2-doc_2.2.0-1~nd12.04+1+nd12.10+1_all.deb Size: 5140662 SHA256: e2632da5ca320dbdd3fab7f532c4fa11990e312979190db16e918ef30dc0e841 SHA1: ba6389d7ed10f3a6bf29eabba44936dbe7bafa6b MD5sum: 505c6dcc506aa9d7bce4a2c8e91bf82c Description: documentation and examples for PyMVPA v. 2 This is an add-on package for the PyMVPA framework. It provides a HTML documentation (tutorial, FAQ etc.), and example scripts. In addition the PyMVPA tutorial is also provided as IPython notebooks. Package: python-mvpa2-lib Source: pymvpa2 Version: 2.2.0-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 104 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), libsvm3, python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.6.1), python-numpy-abi9, python-support (>= 0.90.0) Provides: python2.7-mvpa2-lib Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa2/python-mvpa2-lib_2.2.0-1~nd12.04+1+nd12.10+1_i386.deb Size: 48898 SHA256: 5e118e81a137ff2ec70af950fc6a6c9b471d26086a141bf5c69d194eb1ca8622 SHA1: 5e627e4527541bf8cbcf9812a8a71839ae271372 MD5sum: 83d8b4906ea4ff3c1430ed65154df336 Description: low-level implementations and bindings for PyMVPA v. 2 This is an add-on package for the PyMVPA framework. It provides a low-level implementation of an SMLR classifier and custom Python bindings for the LIBSVM library. . This is a package of a development snapshot. The latest released version is provided by the python-mvpa-lib package. Python-Version: 2.7 Package: python-neo Source: neo Version: 0.2.0-2~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2181 Depends: neurodebian-popularity-contest, python2.7, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy (>= 1:1.3~), python-quantities (>= 0.9.0~) Recommends: python-scipy (>= 0.8~), python-tables (>= 2.2~), libjs-jquery, libjs-underscore Homepage: http://neuralensemble.org/trac/neo Priority: extra Section: python Filename: pool/main/n/neo/python-neo_0.2.0-2~nd12.04+1+nd12.10+1_all.deb Size: 1385368 SHA256: 375ed30dc0a3483275a8a5de9bceb98bba3103aefc5cbf3f2930bba6da785728 SHA1: 5369e5dd2ebd52de4f1de809e3f23cecb7d92fc0 MD5sum: 60a4482c8b65f20f8d05753351d5d5f9 Description: Python IO library for electrophysiological data formats NEO stands for Neural Ensemble Objects and is a project to provide common classes and concepts for dealing with electro-physiological (in vivo and/or simulated) data to facilitate collaborative software/algorithm development. In particular Neo provides: a set a classes for data representation with precise definitions, an IO module with a simple API, documentation, and a set of examples. . NEO offers support for reading data from numerous proprietary file formats (e.g. Spike2, Plexon, AlphaOmega, BlackRock, Axon), read/write support for various open formats (e.g. KlustaKwik, Elan, WinEdr, WinWcp, PyNN), as well as support common file formats, such as HDF5 with Neo-structured content (NeoHDF5, NeoMatlab). . Neo's IO facilities can be seen as a pure-Python and open-source Neuroshare replacement. Package: python-nibabel Source: nibabel Version: 1.3.0-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4152 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0), python-numpy, python-scipy Recommends: python-dicom, python-fuse Suggests: python-nibabel-doc Provides: python2.7-nibabel Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: python Filename: pool/main/n/nibabel/python-nibabel_1.3.0-1~nd12.04+1+nd12.10+1_all.deb Size: 1816340 SHA256: f4393634a41ed4334f5833115835ac674f8fd2f0aaac8a8acecaed5d841b37f2 SHA1: 6e07b237d683b17e0807de6d3faaf078698e2968 MD5sum: 3ec51142db5c228429cb67563faa3222 Description: Python bindings to various neuroimaging data formats NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package also provides a commandline tools: . - dicomfs - FUSE filesystem on top of a directory with DICOMs - nib-ls - 'ls' for neuroimaging files - parrec2nii - for conversion of PAR/REC to NIfTI images Python-Version: 2.7 Package: python-nibabel-doc Source: nibabel Version: 1.3.0-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2440 Depends: neurodebian-popularity-contest, libjs-jquery Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: doc Filename: pool/main/n/nibabel/python-nibabel-doc_1.3.0-1~nd12.04+1+nd12.10+1_all.deb Size: 444170 SHA256: 01df549d5c4ea10fc4712a4ee44ba0d4f6eb3ac668043365cd5a1063bcfc7bbf SHA1: 229ecd36ecd5903eafc04e3553ba1609d861e9c1 MD5sum: 84cbf46b773013a504beb30c532bd5b4 Description: documentation for NiBabel NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package provides the documentation in HTML format. Package: python-pandas Source: pandas Version: 0.9.0-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2948 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0), python-numpy (>= 1:1.6~), python-dateutil, python-pandas-lib (>= 0.9.0-1~nd12.04+1+nd12.10+1) Recommends: python-scipy, python-matplotlib, python-tables, python-tz, python-xlrd, python-statsmodels, python-openpyxl, python-xlwt Suggests: python-pandas-doc Provides: python2.7-pandas Homepage: http://pandas.sourceforge.net Priority: optional Section: python Filename: pool/main/p/pandas/python-pandas_0.9.0-1~nd12.04+1+nd12.10+1_all.deb Size: 663392 SHA256: fc7c11fc75b37ad043d25f1af3423ba8abf9c77f12406539839ac2ab19cb5849 SHA1: 73359968ee75b6c0b1efbed83d1cd06a37c78d30 MD5sum: 2f6aeecd4b5db2d04d028659ba8ad309 Description: data structures for "relational" or "labeled" data pandas is a Python package providing fast, flexible, and expressive data structures designed to make working with "relational" or "labeled" data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, real world data analysis in Python. pandas is well suited for many different kinds of data: . - Tabular data with heterogeneously-typed columns, as in an SQL table or Excel spreadsheet - Ordered and unordered (not necessarily fixed-frequency) time series data. - Arbitrary matrix data (homogeneously typed or heterogeneous) with row and column labels - Any other form of observational / statistical data sets. The data actually need not be labeled at all to be placed into a pandas data structure Package: python-pandas-lib Source: pandas Version: 0.9.0-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2728 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.6.1), python-numpy-abi9, python-support (>= 0.90.0) Provides: python2.7-pandas-lib Homepage: http://pandas.sourceforge.net Priority: optional Section: python Filename: pool/main/p/pandas/python-pandas-lib_0.9.0-1~nd12.04+1+nd12.10+1_i386.deb Size: 985638 SHA256: 29310ae86709737dd42fd3e424fce53c12046ccc96ace588a3dbb4afa9304a07 SHA1: 6382682eeaa1d704df84414791610d7065c6ec7a MD5sum: fe1d65dfb1e2f3b99f8850e16363b843 Description: low-level implementations and bindings for pandas This is an add-on package for python-pandas providing architecture-dependent extensions. Python-Version: 2.7 Package: python-pymc Source: pymc Version: 2.2+ds-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1699 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.6.1), python-numpy-abi9, python-support (>= 0.90.0), libblas3 | libblas.so.3 | libatlas3-base, libc6 (>= 2.11), libgfortran3 (>= 4.6), liblapack3 | liblapack.so.3 | libatlas3-base, python-scipy, python-matplotlib, python-nose Recommends: python-tables Suggests: python-pydot, ipython Homepage: http://pymc-devs.github.com/pymc/ Priority: extra Section: python Filename: pool/main/p/pymc/python-pymc_2.2+ds-1~nd12.10+1_i386.deb Size: 497458 SHA256: b09bb837e155d897a10060b0df44548d4ba23cde910f98d1d5ec23c4d0ce1741 SHA1: 226f4c9bc0ec13a33e11950955f9a01e0dabae12 MD5sum: a6ef56ef5397d5a19338be5af6c7e61a Description: Bayesian statistical models and fitting algorithms PyMC is a Python module that implements Bayesian statistical models and fitting algorithms, including Markov chain Monte Carlo. Its flexibility and extensibility make it applicable to a large suite of problems. Along with core sampling functionality, PyMC includes methods for summarizing output, plotting, goodness-of-fit and convergence diagnostics. Package: python-pymc-doc Source: pymc Version: 2.2+ds-1~nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1840 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Homepage: http://pymc-devs.github.com/pymc/ Priority: extra Section: doc Filename: pool/main/p/pymc/python-pymc-doc_2.2+ds-1~nd12.10+1_all.deb Size: 906858 SHA256: 59074e78f8759a1d2cc3f7798cac2ae5c9991ecf4fd266909ef1252e91bfe6fe SHA1: 0cc0b5fb138b9896e1905ba8f80e97b338fab08b MD5sum: 0073ef238c61a59b8ff50c2f2534d15b Description: Bayesian statistical models and fitting algorithms PyMC is a Python module that implements Bayesian statistical models and fitting algorithms, including Markov chain Monte Carlo. Its flexibility and extensibility make it applicable to a large suite of problems. Along with core sampling functionality, PyMC includes methods for summarizing output, plotting, goodness-of-fit and convergence diagnostics. . This package provides the documentation in HTML format. Package: python-pypsignifit Source: psignifit3 Version: 3.0~beta.20120611.1-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1488 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.6), python (<< 2.8), python (>= 2.7), python-support (>= 0.90.0), python-numpy, python-matplotlib, python-scipy Homepage: http://psignifit.sourceforge.net Priority: extra Section: python Filename: pool/main/p/psignifit3/python-pypsignifit_3.0~beta.20120611.1-1~nd12.04+1+nd12.10+1_i386.deb Size: 425236 SHA256: 0e9584562a3201abb8589ebbc216be71fae4371c1c609c7059b7fcf2d5c3898c SHA1: eaa528a503729edb8e08765a233a645e0ab1d547 MD5sum: 3e453aefceafbe8491f01c1d95263018 Description: psychometric analysis of psychophysics data in Python Psignifit allows fitting of psychometric functions to datasets while maintaining full control over a large number of parameters. Psignifit performs the calculation of confidence intervals as well as goodness-of-fit tests. In addition it offers: . * full Bayesian treatment of psychometric functions including Bayesian model selection and goodness of fit assessment * identification of influential observations and outlier detection * flexible shape definition of the psychometric function . This package provides the Python bindings. Package: python-scikits-learn Source: scikit-learn Version: 0.12.1-1~nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 27 Depends: neurodebian-popularity-contest, python-sklearn Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: oldlibs Filename: pool/main/s/scikit-learn/python-scikits-learn_0.12.1-1~nd12.10+1_all.deb Size: 24320 SHA256: 53562647783d0fe36251258f18495a9e939259d0911a6285f13b949bd59fa8c2 SHA1: c9650b75753d8e0c9c15195ddad04b33a3d5d406 MD5sum: b6265933cbb7f828d5b9ed4011c60fd6 Description: transitional compatibility package for scikits.learn -> sklearn migration Provides old namespace (scikits.learn) and could be removed if dependent code migrated to use sklearn for clarity of the namespace. Package: python-sklearn Source: scikit-learn Version: 0.12.1-1~nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2658 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-numpy, python-scipy, python-sklearn-lib (>= 0.12.1-1~nd12.10+1) Recommends: python-nose, python-matplotlib, python-joblib (>= 0.4.5) Suggests: python-dap, python-scikits-optimization, python-sklearn-doc, ipython Enhances: python-mdp, python-mvpa2 Breaks: python-scikits-learn (<< 0.9~) Replaces: python-scikits-learn (<< 0.9~) Provides: python2.7-sklearn Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python-sklearn_0.12.1-1~nd12.10+1_all.deb Size: 927428 SHA256: bd77b892fd384ae768929142639cb75386808d7e990f5633cc6f073609c157ae SHA1: 4735f3c5d34cd437ace954e1bbf9295df17f425c MD5sum: c04922c009ff2b3f86a73b7214eba32d Description: Python modules for machine learning and data mining scikit-learn is a collection of Python modules relevant to machine/statistical learning and data mining. Non-exhaustive list of included functionality: - Gaussian Mixture Models - Manifold learning - kNN - SVM (via LIBSVM) Python-Version: 2.7 Package: python-sklearn-doc Source: scikit-learn Version: 0.12.1-1~nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 36628 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-sklearn Conflicts: python-scikits-learn-doc Replaces: python-scikits-learn-doc Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: doc Filename: pool/main/s/scikit-learn/python-sklearn-doc_0.12.1-1~nd12.10+1_all.deb Size: 26700106 SHA256: 06b2598b3858652b552cf0b9a924a3c08b1a06f5e33171a20a6a365dcaa8dbb3 SHA1: b653e46c1102a100e1a6b0f26d54743b2bec31ec MD5sum: 89edff9adee18d7d86fd350e22137310 Description: documentation and examples for scikit-learn This package contains documentation and example scripts for python-sklearn. Package: python-sklearn-lib Source: scikit-learn Version: 0.12.1-1~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1802 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.6.1), python-numpy-abi9, python-support (>= 0.90.0) Conflicts: python-scikits-learn-lib Replaces: python-scikits-learn-lib Provides: python2.7-sklearn-lib Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python-sklearn-lib_0.12.1-1~nd12.10+1_i386.deb Size: 704980 SHA256: 7055f3dcc5aa5d6b8be354d78ba17b6924b4693f6e4cdafd619a19649aef2938 SHA1: 5ebc89179186ba4100d248090b79bf08703cf446 MD5sum: b40993200051519aed4ddbcc6bda779b Description: low-level implementations and bindings for scikit-learn This is an add-on package for python-sklearn. It provides low-level implementations and custom Python bindings for the LIBSVM library. Python-Version: 2.7 Package: python-surfer Source: pysurfer Version: 0.3+git15-gae6cbb1-1~nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 93 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-numpy, python-scipy, python-nibabel, python-imaging, mayavi2, python-argparse, ipython Recommends: mencoder Homepage: http://pysurfer.github.com Priority: extra Section: python Filename: pool/main/p/pysurfer/python-surfer_0.3+git15-gae6cbb1-1~nd12.04+1+nd12.10+1_all.deb Size: 28082 SHA256: 2a0d8f7bea7b8e7fbe80619282bcd1c0b6874fbc2569c3248451c752f1cdc4dc SHA1: 186db3b9114826618485059e3582945a132d76f5 MD5sum: 7cc577897180b73015b7f99b17c6d04f Description: visualize Freesurfer's data in Python This is a Python package for visualization and interaction with cortical surface representations of neuroimaging data from Freesurfer. It extends Mayavi’s powerful visualization engine with a high-level interface for working with MRI and MEG data. . PySurfer offers both a command-line interface designed to broadly replicate Freesurfer’s Tksurfer program as well as a Python library for writing scripts to efficiently explore complex datasets. Python-Version: 2.7 Package: python-traits4 Source: python-traits Version: 4.0.0-1~cbp1~nd11.04+1+nd11.10+1+nd12.04+1+nd12.10+1 Architecture: i386 Bugs: mailto:bugs@neuro.debian.net Maintainer: NeuroDebian Team Installed-Size: 1662 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), python (<< 2.8), python (>= 2.7), python-support (>= 0.90.0) Suggests: python-traitsui Conflicts: python-traits (>= 4.0~) Homepage: http://pypi.python.org/pypi/traits Priority: optional Section: python Filename: pool/main/p/python-traits/python-traits4_4.0.0-1~cbp1~nd11.04+1+nd11.10+1+nd12.04+1+nd12.10+1_i386.deb Size: 338408 SHA256: 827aa0b66afcb850fae324eaad560240f1bf0648bd9400bdc562f9cfe9a1abe4 SHA1: 35702275f49497eda3e1a4c9edbdcf5d27b415c6 MD5sum: 9c1944e8a319c7685b2af4cd51a2dc4b Description: Manifest typing and reactive programming for Python The traits package provides a metaclass with special attributes that are called traits. A trait is a type definition that can be used for normal Python object attributes, giving the attributes some additional characteristics: * Initialization: A trait attribute can have a default value * Validation: A trait attribute is manifestly typed. * Delegation: The value of a trait attribute can be contained in another object * Notification: Setting the value of a trait attribute can fired callbacks * Visualization: With the TraitsUI package, GUIs can be generated automatically from traited objects. Uploaders: Yaroslav Halchenko , Michael Hanke Vcs-Browser: http://git.debian.org/?p=pkg-exppsy/python-traits4.git Vcs-Git: git://git.debian.org/git/pkg-exppsy/python-traits4.git Package: python3-mpi4py Source: mpi4py Version: 1.3+hg20120611-2~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1315 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libopenmpi1.3, python3 (>= 3.2.3-3~), python3 (<< 3.3) Recommends: mpi-default-bin Suggests: python3-numpy Homepage: http://code.google.com/p/mpi4py/ Priority: extra Section: python Filename: pool/main/m/mpi4py/python3-mpi4py_1.3+hg20120611-2~nd12.10+1_i386.deb Size: 425890 SHA256: 5c87518a6cba506ee480e7103163e2b3ec0a3a32c8d021e2b8a3b342a0c66224 SHA1: f8599763f260b20005d8f77bc3c2c6f0556cf2b1 MD5sum: 080a7baea5f1b8d819202796991eac7d Description: bindings of the Message Passing Interface (MPI) standard MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. . mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an object oriented interface which closely follows MPI-2 C++ bindings. It supports point-to-point (sends, receives) and collective (broadcasts, scatters, gathers) communications of any picklable Python object as well as optimized communications of Python object exposing the single-segment buffer interface (NumPy arrays, builtin bytes/string/array objects). Package: python3-mpi4py-dbg Source: mpi4py Version: 1.3+hg20120611-2~nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2787 Depends: neurodebian-popularity-contest, python3-mpi4py (= 1.3+hg20120611-2~nd12.10+1) Homepage: http://code.google.com/p/mpi4py/ Priority: extra Section: debug Filename: pool/main/m/mpi4py/python3-mpi4py-dbg_1.3+hg20120611-2~nd12.10+1_i386.deb Size: 965384 SHA256: 4f20c6c386e30b5f0fc8d0dba7f7447baf9f4f61b623036774fdb6fec4775517 SHA1: 12ea7b3618ca1a2566bb5da39981f9b330fb6280 MD5sum: 799ca5c5400d0bdd2269e822b880da5f Description: bindings of the MPI standard -- debug symbols MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. . mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an object oriented interface which closely follows MPI-2 C++ bindings. It supports point-to-point (sends, receives) and collective (broadcasts, scatters, gathers) communications of any picklable Python object as well as optimized communications of Python object exposing the single-segment buffer interface (NumPy arrays, builtin bytes/string/array objects). . This package provides debug symbols. Package: qnifti2dicom Source: nifti2dicom Version: 0.4.5-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2997 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgdcm2.2, libinsighttoolkit3.20, libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.5.3), libstdc++6 (>= 4.6), libvtk5.8, libvtk5.8-qt4, nifti2dicom (= 0.4.5-1~nd12.04+1+nd12.10+1), nifti2dicom-data (= 0.4.5-1~nd12.04+1+nd12.10+1) Homepage: https://github.com/biolab-unige/nifti2dicom Priority: optional Section: science Filename: pool/main/n/nifti2dicom/qnifti2dicom_0.4.5-1~nd12.04+1+nd12.10+1_i386.deb Size: 656046 SHA256: a721993de21a21f49262870ff9092b6fc00937e750b916401e0a618d7c1c3ea7 SHA1: e7d0c1732e19176034cd666f0eabbde21b7df5cc MD5sum: e5fadd9fe4e63ef3e3d55f4111824ade Description: convert 3D medical images to DICOM 2D series (gui) Nifti2Dicom is a convertion tool that converts 3D NIfTI files (and other formats supported by ITK, including Analyze, MetaImage Nrrd and VTK) to DICOM. Unlike other conversion tools, it can import a DICOM file that is used to import the patient and study DICOM tags, and allows you to edit the accession number and other DICOM tags, in order to create a valid DICOM that can be imported in a PACS. . This package contains the Qt4 GUI. Package: remake Version: 3.82+dbg0.9+dfsg-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 285 Depends: neurodebian-popularity-contest, libc6 (>= 2.11), libreadline6 (>= 6.0) Homepage: http://bashdb.sourceforge.net/remake Priority: extra Section: devel Filename: pool/main/r/remake/remake_3.82+dbg0.9+dfsg-1~nd12.04+1+nd12.10+1_i386.deb Size: 173770 SHA256: 99627ab405a4fa8e3fa56e6474c8f96ed210bc89823fcd94fdbc94a2d24a5c81 SHA1: 0a2041121a1d3739e2e32bae634e7196347cab8f MD5sum: 0f4b3c9574061d5f3546d325c218605b Description: GNU make fork with improved error reporting and debugging Modernized version of GNU make utility that adds improved error reporting, the ability to trace execution in a comprehensible way, and a debugger. Some of the features of the debugger are: * see the target call stack * set breakpoints on targets * show and set variables * execute arbitrary "make" code * issue shell commands while stopped in the middle of execution * inspect target descriptions * write a file with the commands of the target expanded Package: spm8-common Source: spm8 Version: 8.4667~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 18467 Depends: neurodebian-popularity-contest Recommends: spm8-data, spm8-doc Priority: extra Section: science Filename: pool/main/s/spm8/spm8-common_8.4667~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1_all.deb Size: 10573812 SHA256: 8eeb69c28d8bc812d050a03f643ef47fd9ca61da620c2dce61916c1589f981d5 SHA1: 7c3aeb64beb10f554efbb6f00795fbb7b8edb359 MD5sum: aaabf7bc6f7bdc4d8b09c4f3637bc671 Description: analysis of brain imaging data sequences Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the platform-independent M-files. Package: spm8-data Source: spm8 Version: 8.4667~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 72987 Depends: neurodebian-popularity-contest Priority: extra Section: science Filename: pool/main/s/spm8/spm8-data_8.4667~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1_all.deb Size: 52167766 SHA256: 97af636dd454562917c7776bf29eeda02133b789f72ca0c1574c0b69c34a84ce SHA1: 0bcb986496f0f413dba9b18e9c7b40c59486bf5f MD5sum: d9298224fbbc0496778f68f83eb5d24b Description: data files for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provide the data files shipped with the SPM distribution, such as various stereotaxic brain space templates and EEG channel setups. Package: spm8-doc Source: spm8 Version: 8.4667~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9242 Depends: neurodebian-popularity-contest Priority: extra Section: doc Filename: pool/main/s/spm8/spm8-doc_8.4667~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1_all.deb Size: 8990964 SHA256: de8e156a6572ef9234441722cd628b7d0a2f541deb3a7e1875f7c0bf9c73c885 SHA1: 50b16592314302803dfa31ac6ca03d2bed203b50 MD5sum: f040994ba7e7c8c9f4a211e19ab683f2 Description: manual for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the SPM manual in PDF format. Package: stabilitycalc Version: 0.1-1~nd11.04+1+nd11.10+1+nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 119 Depends: neurodebian-popularity-contest, python, python-support (>= 0.90.0), python-numpy, python-matplotlib, python-scipy, python-nifti Recommends: python-dicom Homepage: https://github.com/bbfrederick/stabilitycalc Priority: extra Section: science Filename: pool/main/s/stabilitycalc/stabilitycalc_0.1-1~nd11.04+1+nd11.10+1+nd12.04+1+nd12.10+1_all.deb Size: 28774 SHA256: 49039b7b76aa244e4ab34fb04efe43f167aa10e762799ff318276089bf7c2acf SHA1: f2a5e4c70779898ef2164710d40febc1320a6116 MD5sum: 03a808a4acccdd5a48c6b8d10f8b96e5 Description: evaluate fMRI scanner stability Command-line tools to calculate numerous fMRI scanner stability metrics, based on the FBIRN quality assurance test protocal. Any 4D volumetric timeseries image in NIfTI format is support input. Output is a rich HTML report. Python-Version: 2.7 Package: vrpn Version: 07.30+dfsg-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 284 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), libvrpn0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1), libvrpnserver0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1) Homepage: http://www.cs.unc.edu/Research/vrpn/ Priority: extra Section: utils Filename: pool/main/v/vrpn/vrpn_07.30+dfsg-1~nd12.04+1+nd12.10+1_i386.deb Size: 65510 SHA256: c73c4c0b0a9c2fa9b070baab5f7e84e7109fa880d9b94becc6e2269230052988 SHA1: a5319d5d1e404f41d1ee0649e068127f69f82933 MD5sum: f8c95f12e094ef2730f70aa7141fd796 Description: Virtual Reality Peripheral Network (executables) The Virtual-Reality Peripheral Network (VRPN) is a set of classes within a library and a set of servers that are designed to implement a network-transparent interface between application programs and the set of physical devices (tracker, etc.) used in a virtual-reality (VR) system. The idea is to have a PC or other host at each VR station that controls the peripherals (tracker, button device, haptic device, analog inputs, sound, etc). VRPN provides connections between the application and all of the devices using the appropriate class-of-service for each type of device sharing this link. The application remains unaware of the network topology. Note that it is possible to use VRPN with devices that are directly connected to the machine that the application is running on, either using separate control programs or running all as a single program. . This package contains the executables like the VRPN server. Package: vrpn-dbg Source: vrpn Version: 07.30+dfsg-1~nd12.04+1+nd12.10+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 4171 Depends: neurodebian-popularity-contest, libvrpn0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1), libvrpnserver0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1), vrpn (= 07.30+dfsg-1~nd12.04+1+nd12.10+1) Homepage: http://www.cs.unc.edu/Research/vrpn/ Priority: extra Section: debug Filename: pool/main/v/vrpn/vrpn-dbg_07.30+dfsg-1~nd12.04+1+nd12.10+1_i386.deb Size: 1596596 SHA256: c02bbed93367563a2798cbc93b91efa765b7e27aeca6cedc060e631f74b68486 SHA1: 204119accbb2ebee9ef96ae847b187bde29ac89d MD5sum: 6f045e74cd24b434a843ebc857e2044d Description: Virtual Reality Peripheral Network (debugging symbols) The Virtual-Reality Peripheral Network (VRPN) is a set of classes within a library and a set of servers that are designed to implement a network-transparent interface between application programs and the set of physical devices (tracker, etc.) used in a virtual-reality (VR) system. The idea is to have a PC or other host at each VR station that controls the peripherals (tracker, button device, haptic device, analog inputs, sound, etc). VRPN provides connections between the application and all of the devices using the appropriate class-of-service for each type of device sharing this link. The application remains unaware of the network topology. Note that it is possible to use VRPN with devices that are directly connected to the machine that the application is running on, either using separate control programs or running all as a single program. . This package contains the debugging symbols of the libraries and executables.