Package: fsl Version: 5.0.2-2~nd10.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 40 Depends: fsl-5.0 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl_5.0.2-2~nd10.04+1_all.deb Size: 19526 SHA256: 9dfbd42e67e9445ffc71224aeac94eed65f8190390eed6a21af56fc8a9e19ea5 SHA1: 546e53c7403b160672354635ae294d5eae479d8a MD5sum: 0988c451e82da57ec9f6e2c6bb3979a9 Description: metapackage for the latest version of FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. Package: fsl-4.1 Source: fsl Version: 4.1.9-6~nd10.04+1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 27984 Depends: libc6 (>= 2.11), libgcc1 (>= 1:4.1.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libnewmat10ldbl, libnifti2, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.4.0), zlib1g (>= 1:1.1.4), mozilla-firefox | www-browser, tcsh | c-shell, tk8.4 (>= 8.4.7), tcl8.4 (>= 8.4.7), bc, dc Recommends: fsl-doc-4.1 (= 4.1.9-6~nd10.04+1), fsl-atlases, fslview Suggests: fsl-feeds, octave | octave3.2 (>= 3.2.3), dicomnifti, fsl-possum-data, fsl-first-data, gridengine-client Conflicts: fsl-doc-4.1 (<< 4.1.9-5~), fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl-4.1_4.1.9-6~nd10.04+1_amd64.deb Size: 10418162 SHA256: 2250eadedb3649de03b194458fdd3fa6c4bcb12577b0e5ed6a69bc0c896f435c SHA1: a2148afbeebb522bf4b988929f78281401fcf257 MD5sum: 30a80f8cc1519be355f413bff86290ff Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-5.0 Source: fsl Version: 5.0.2-2~nd10.04+1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 37620 Depends: libc6 (>= 2.11), libexpat1 (>= 1.95.8), libgcc1 (>= 1:4.1.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libgiftiio0, libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libgomp1 (>= 4.2.1), libnewmat10ldbl, libnifti2, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.4.0), zlib1g (>= 1:1.1.4), mozilla-firefox | www-browser, tcsh | c-shell, tk8.4 (>= 8.4.7), tcl8.4 (>= 8.4.7), bc, dc, python Recommends: fsl-doc-5.0 (= 5.0.2-2~nd10.04+1), fsl-atlases, fslview Suggests: fsl-feeds, octave | octave3.2 (>= 3.2.3), dicomnifti, fsl-possum-data, fsl-first-data, gridengine-client Conflicts: fsl-doc-4.1 (<< 4.1.9-5~), fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl-5.0_5.0.2-2~nd10.04+1_amd64.deb Size: 14150334 SHA256: 0f5cc9e8ce0b5a8a0afbe8cda772f14bf6047c9e847fd61c98c3c84f6f5166ed SHA1: 0f9c7a042c9f837fec80e2e6e59199e0d2c56522 MD5sum: 84409546972ce9b6210855790476359c Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Some FSL components require additional data packages (fsl-atlases, fsl-first-data, fsl-possum-data) that are currently available from the NeuroDebian repository only. For more information on how to obtain these data packages visit http://neuro.debian.net. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-doc Source: fsl Version: 4.1.6-1~lucid.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18356 Depends: fslview-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc_4.1.6-1~lucid.nd1_all.deb Size: 11171432 SHA256: 0f665f6b1e38859ef091d092bfa19a37039e19be0fda0d3038dc7e9341119fea SHA1: f0eb0fbf1e16c4debab6f6a4c33c50f43eba1528 MD5sum: f1b20e6f103f76741d38cc605d65a3d2 Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various commandline tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: fsl-doc-4.1 Source: fsl Version: 4.1.9-6~nd10.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18088 Recommends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-4.1_4.1.9-6~nd10.04+1_all.deb Size: 11202270 SHA256: c7fd66d0cfef4a3993bf077364fa1687b321bbff0ce09cc6106d0c5846f94833 SHA1: 7dabe50877c5e0c30e86cd53f88fe9412525e06c MD5sum: 41c77eb4be8a7c90e6966f65ce174cdb Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: fsl-doc-5.0 Source: fsl Version: 5.0.2-2~nd10.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 19212 Recommends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-5.0_5.0.2-2~nd10.04+1_all.deb Size: 14456516 SHA256: 1a6ab6ee10e15fa7b47101add7ec3bb9cb2be9c97e4833edf210c364ef271c8a SHA1: 11f54f16a9b5e53ebf19b41ddddba32ad9397ca8 MD5sum: c42dc7eba5e2a6144151374465435c14 Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: matlab-psychtoolbox-3 Source: psychtoolbox-3-nonfree Version: 3.0.10.20130108-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3 Depends: neurodebian-popularity-contest, matlab-psychtoolbox-3-nonfree (= 3.0.10.20130108-1~nd+1), psychtoolbox-3-common (>= 3.0.10.20130108-1~nd+1.dfsg) Recommends: matlab-support Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3_3.0.10.20130108-1~nd+1_all.deb Size: 3120 SHA256: 41b6b351b4ac0a248d73b78fa57c5c83dde39915440e5ed417705e5ca40a0edf SHA1: b606c60dbf8892cc8a00563e663341475e906125 MD5sum: 83e26619c95dfc5ea3b25910a1251174 Description: toolbox for vision research -- Matlab bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package exposes PTB-3 within Matlab environment. It also provides a convenience script ptb3-matlab to simplify running psychtoolbox in matlab. . For now it relies on -nonfree package providing binary builds of all PTB-3 bindings for Matlab. Package: matlab-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.10.20130108-1~nd+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 3986 Depends: neurodebian-popularity-contest, psychtoolbox-3-common (>> 3.0.10.20130108-1~nd+1.dfsg) Conflicts: psychtoolbox-3-common (<< 3.0.10.20130108-1~nd+1.dfsg.1) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3-nonfree_3.0.10.20130108-1~nd+1_amd64.deb Size: 1308986 SHA256: 53ae15df4f9f40a4d161cf19fa74859e2007eb92e21cf5a8d7faf1915f1613a0 SHA1: bbb7e49b64a183ebdf0db18c53485bf8274306a2 MD5sum: e2aa440c08cdf39361753a0b9e2428e1 Description: toolbox for vision research -- Matlab binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Matlab built/supported/distributed by upstream. Package: mipav Version: 5.0.0.20100907-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 116 Pre-Depends: debconf (>= 0.5) | debconf-2.0 Depends: openjdk-6-jre | java6-runtime, libjogl-java, libjava3d-java, wget Homepage: http://mipav.cit.nih.gov/ Priority: extra Section: non-free/science Filename: pool/non-free/m/mipav/mipav_5.0.0.20100907-2_all.deb Size: 15272 SHA256: e5979bf557f27455dfe58a2244dbc066f0d5c276ab85cad013fbacc5ab303d60 SHA1: 61e581b87f680c0dbcce05e45ef290c4133fac55 MD5sum: 44ab2224b485d68657f13ac87d35c605 Description: quantitative analysis and visualization of medical images The MIPAV (Medical Image Processing, Analysis, and Visualization) application enables quantitative analysis and visualization of medical images of numerous modalities such as PET, MRI, CT, or microscopy. Using MIPAV's standard user-interface and analysis tools, researchers at remote sites can easily share research data and analyses, thereby enhancing their ability to research, diagnose, monitor, and treat medical disorders. MIPAV provides an interface for plug-ins and serves as the foundation for other projects (e.g. JIST). . This package provides downloader/installer for non-redistributable closed-source version of MIPAV and a convenience startup wrapper. You will have a choice of reviewing the license and accepting or declining it upon installation. Package: octave-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.10.20130108-1~nd+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1297 Depends: neurodebian-popularity-contest, psychtoolbox-3-common (>> 3.0.10.20130108-1~nd+1.dfsg) Conflicts: psychtoolbox-3-common (<< 3.0.10.20130108-1~nd+1.dfsg.1) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/octave-psychtoolbox-3-nonfree_3.0.10.20130108-1~nd+1_amd64.deb Size: 427872 SHA256: 094e57f248d8413f2b7de5732278bfc816e4e1254fe61b0e77034a6dc83fa626 SHA1: 1af9d00a992c10155d0eeefaebb76f598cd03185 MD5sum: 62da074f0bc6c5cf5f522d000728be46 Description: toolbox for vision research -- Octave binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Octave built/supported/distributed by upstream.