Package: fsl Version: 5.0.2-2~nd10.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 40 Depends: fsl-5.0 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl_5.0.2-2~nd10.04+1_all.deb Size: 19526 SHA256: 9dfbd42e67e9445ffc71224aeac94eed65f8190390eed6a21af56fc8a9e19ea5 SHA1: 546e53c7403b160672354635ae294d5eae479d8a MD5sum: 0988c451e82da57ec9f6e2c6bb3979a9 Description: metapackage for the latest version of FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. Package: fsl-4.1 Source: fsl Version: 4.1.9-6~nd10.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 27696 Depends: libc6 (>= 2.11), libgcc1 (>= 1:4.1.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libnewmat10ldbl, libnifti2, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.4.0), zlib1g (>= 1:1.1.4), mozilla-firefox | www-browser, tcsh | c-shell, tk8.4 (>= 8.4.7), tcl8.4 (>= 8.4.7), bc, dc Recommends: fsl-doc-4.1 (= 4.1.9-6~nd10.04+1), fsl-atlases, fslview Suggests: fsl-feeds, octave | octave3.2 (>= 3.2.3), dicomnifti, fsl-possum-data, fsl-first-data, gridengine-client Conflicts: fsl-doc-4.1 (<< 4.1.9-5~), fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl-4.1_4.1.9-6~nd10.04+1_i386.deb Size: 10292922 SHA256: 4733669037561d6f1288e0f1bfc716bfd2817a517f5eef6c99d4fc97e7ec1d07 SHA1: 27db5ff06a82b832daae4f987070c36a5cb9a3c3 MD5sum: 9d619a1d7b47e8f31c99a82cdfe90edc Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-5.0 Source: fsl Version: 5.0.0-1~nd10.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 37000 Depends: libc6 (>= 2.11), libexpat1 (>= 1.95.8), libgcc1 (>= 1:4.1.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libgiftiio0, libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libnewmat10ldbl, libnifti2, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.4.0), zlib1g (>= 1:1.1.4), mozilla-firefox | www-browser, tcsh | c-shell, tk8.4 (>= 8.4.7), tcl8.4 (>= 8.4.7), bc, dc, python Recommends: fsl-doc-5.0 (= 5.0.0-1~nd10.04+1), fsl-atlases, fslview Suggests: fsl-feeds, octave | octave3.2 (>= 3.2.3), dicomnifti, fsl-possum-data, fsl-first-data, gridengine-client Conflicts: fsl-doc-4.1 (<< 4.1.9-5~), fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl-5.0_5.0.0-1~nd10.04+1_i386.deb Size: 13913610 SHA256: dc5792fc09c95631cc5ac4d33149b5ecb0e63bc782412157ca248b849cab2bda SHA1: 3b18d47863ae21a4599479059cfb18f638be6c9d MD5sum: 62d9858f08430d839fee0f0e9c8591fb Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-doc Source: fsl Version: 4.1.6-1~lucid.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18356 Depends: fslview-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc_4.1.6-1~lucid.nd1_all.deb Size: 11171432 SHA256: 0f665f6b1e38859ef091d092bfa19a37039e19be0fda0d3038dc7e9341119fea SHA1: f0eb0fbf1e16c4debab6f6a4c33c50f43eba1528 MD5sum: f1b20e6f103f76741d38cc605d65a3d2 Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various commandline tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: fsl-doc-4.1 Source: fsl Version: 4.1.9-6~nd10.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18088 Recommends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-4.1_4.1.9-6~nd10.04+1_all.deb Size: 11202270 SHA256: c7fd66d0cfef4a3993bf077364fa1687b321bbff0ce09cc6106d0c5846f94833 SHA1: 7dabe50877c5e0c30e86cd53f88fe9412525e06c MD5sum: 41c77eb4be8a7c90e6966f65ce174cdb Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: fsl-doc-5.0 Source: fsl Version: 5.0.2-2~nd10.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 19212 Recommends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-5.0_5.0.2-2~nd10.04+1_all.deb Size: 14456516 SHA256: 1a6ab6ee10e15fa7b47101add7ec3bb9cb2be9c97e4833edf210c364ef271c8a SHA1: 11f54f16a9b5e53ebf19b41ddddba32ad9397ca8 MD5sum: c42dc7eba5e2a6144151374465435c14 Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: matlab-psychtoolbox-3 Source: psychtoolbox-3-nonfree Version: 3.0.10.20130108-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3 Depends: neurodebian-popularity-contest, matlab-psychtoolbox-3-nonfree (= 3.0.10.20130108-1~nd+1), psychtoolbox-3-common (>= 3.0.10.20130108-1~nd+1.dfsg) Recommends: matlab-support Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3_3.0.10.20130108-1~nd+1_all.deb Size: 3120 SHA256: 41b6b351b4ac0a248d73b78fa57c5c83dde39915440e5ed417705e5ca40a0edf SHA1: b606c60dbf8892cc8a00563e663341475e906125 MD5sum: 83e26619c95dfc5ea3b25910a1251174 Description: toolbox for vision research -- Matlab bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package exposes PTB-3 within Matlab environment. It also provides a convenience script ptb3-matlab to simplify running psychtoolbox in matlab. . For now it relies on -nonfree package providing binary builds of all PTB-3 bindings for Matlab. Package: matlab-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.10.20130108-1~nd+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 3938 Depends: neurodebian-popularity-contest, psychtoolbox-3-common (>> 3.0.10.20130108-1~nd+1.dfsg) Conflicts: psychtoolbox-3-common (<< 3.0.10.20130108-1~nd+1.dfsg.1) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3-nonfree_3.0.10.20130108-1~nd+1_i386.deb Size: 1333006 SHA256: c8d4ade5dec80bbe35961f353227987b302ae6b5401f721847f0cd30ada2d0e4 SHA1: 85271e4176f1600438b06860db768696e224e4e5 MD5sum: e491a4f7e969b48826d7f007bb424ba9 Description: toolbox for vision research -- Matlab binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Matlab built/supported/distributed by upstream. Package: mipav Version: 5.0.0.20100907-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 116 Pre-Depends: debconf (>= 0.5) | debconf-2.0 Depends: openjdk-6-jre | java6-runtime, libjogl-java, libjava3d-java, wget Homepage: http://mipav.cit.nih.gov/ Priority: extra Section: non-free/science Filename: pool/non-free/m/mipav/mipav_5.0.0.20100907-2_all.deb Size: 15272 SHA256: e5979bf557f27455dfe58a2244dbc066f0d5c276ab85cad013fbacc5ab303d60 SHA1: 61e581b87f680c0dbcce05e45ef290c4133fac55 MD5sum: 44ab2224b485d68657f13ac87d35c605 Description: quantitative analysis and visualization of medical images The MIPAV (Medical Image Processing, Analysis, and Visualization) application enables quantitative analysis and visualization of medical images of numerous modalities such as PET, MRI, CT, or microscopy. Using MIPAV's standard user-interface and analysis tools, researchers at remote sites can easily share research data and analyses, thereby enhancing their ability to research, diagnose, monitor, and treat medical disorders. MIPAV provides an interface for plug-ins and serves as the foundation for other projects (e.g. JIST). . This package provides downloader/installer for non-redistributable closed-source version of MIPAV and a convenience startup wrapper. You will have a choice of reviewing the license and accepting or declining it upon installation. Package: octave-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.10.20130108-1~nd+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1130 Depends: neurodebian-popularity-contest, psychtoolbox-3-common (>> 3.0.10.20130108-1~nd+1.dfsg) Conflicts: psychtoolbox-3-common (<< 3.0.10.20130108-1~nd+1.dfsg.1) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/octave-psychtoolbox-3-nonfree_3.0.10.20130108-1~nd+1_i386.deb Size: 407512 SHA256: afce57768cec7df3cebc47bb9c546a6a627b248464e82eb25501c5c36f53d607 SHA1: 0c9ee2048c35a742be4dae04ad32986172a5c921 MD5sum: 3134db054dd3dc8fd72c49016248cf13 Description: toolbox for vision research -- Octave binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Octave built/supported/distributed by upstream.