Package: fsl Version: 5.0.2-2~nd11.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 40 Depends: fsl-5.0 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl_5.0.2-2~nd11.04+1_all.deb Size: 19510 SHA256: 36f3526209a2cd3138de4296c87082d3b5349f87deda766ecd941cfc46ad7519 SHA1: ad0e46f1dc1a27ae04cb35950af4b9d8235f3eac MD5sum: 375ff8eeba94801e2903fb1712040092 Description: metapackage for the latest version of FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. Package: fsl-4.1 Source: fsl Version: 4.1.9-6~nd11.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 28080 Depends: libc6 (>= 2.11), libgcc1 (>= 1:4.1.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libnewmat10ldbl, libnifti2, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.5), zlib1g (>= 1:1.1.4), mozilla-firefox | www-browser, tcsh | c-shell, tk8.4 (>= 8.4.7), tcl8.4 (>= 8.4.7), bc, dc Recommends: fsl-doc-4.1 (= 4.1.9-6~nd11.04+1), fsl-atlases, fslview Suggests: fsl-feeds, octave | octave3.2 (>= 3.2.4), dicomnifti, fsl-possum-data, fsl-first-data, gridengine-client Conflicts: fsl-doc-4.1 (<< 4.1.9-5~), fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl-4.1_4.1.9-6~nd11.04+1_i386.deb Size: 10369304 SHA256: d8ecfd26fa63796a88ed76956b76f48d6690d2fb3a656fb229ab23fc229a76ce SHA1: c039dbf6b39496643b1a29a94d380bae8b648b8c MD5sum: 05f29e7873be2733966938ad9d666e55 Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-5.0 Source: fsl Version: 5.0.2-2~nd11.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 37556 Depends: libc6 (>= 2.11), libexpat1 (>= 1.95.8), libgcc1 (>= 1:4.1.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libgiftiio0, libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libgomp1 (>= 4.2.1), libnewmat10ldbl, libnifti2, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.5), zlib1g (>= 1:1.1.4), mozilla-firefox | www-browser, tcsh | c-shell, tk8.4 (>= 8.4.7), tcl8.4 (>= 8.4.7), bc, dc, python Recommends: fsl-doc-5.0 (= 5.0.2-2~nd11.04+1), fsl-atlases, fslview Suggests: fsl-feeds, octave | octave3.2 (>= 3.2.4), dicomnifti, fsl-possum-data, fsl-first-data, gridengine-client Conflicts: fsl-doc-4.1 (<< 4.1.9-5~), fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl-5.0_5.0.2-2~nd11.04+1_i386.deb Size: 14007002 SHA256: 4ab63f17fc41e1109945467e9c2be3fed7dd6db9b6aa456f1e7c99899c7099ff SHA1: 5cf30fbc219cc0f00ca40a4db03ee76866ddf3b8 MD5sum: 2e964634b2f4c8362f1927934b6fdb2c Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Some FSL components require additional data packages (fsl-atlases, fsl-first-data, fsl-possum-data) that are currently available from the NeuroDebian repository only. For more information on how to obtain these data packages visit http://neuro.debian.net. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-doc-4.1 Source: fsl Version: 4.1.9-6~nd11.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18088 Recommends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-4.1_4.1.9-6~nd11.04+1_all.deb Size: 11202272 SHA256: 89975e41d5b5f30dfb00ae7cc8ab01e44c64801cffd463ac5abdde26ccf1259c SHA1: 83f92fb977b750e9c2b699b0926dcf282d4db1dc MD5sum: a6586f41fba46649f18fd6bda1b53c54 Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: fsl-doc-5.0 Source: fsl Version: 5.0.2-2~nd11.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 19212 Recommends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-5.0_5.0.2-2~nd11.04+1_all.deb Size: 14456334 SHA256: e77d6ee1d716c19844f12e5aa81b23c6c322710c5386fabcf557fae66b310942 SHA1: 92f9482a8ca1d010c59f8e8488dd0125cc4212fe MD5sum: 16baed481cb47cbea1c664dd7b317577 Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: matlab-psychtoolbox-3 Source: psychtoolbox-3-nonfree Version: 3.0.10.20130108-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3 Depends: neurodebian-popularity-contest, matlab-psychtoolbox-3-nonfree (= 3.0.10.20130108-1~nd+1), psychtoolbox-3-common (>= 3.0.10.20130108-1~nd+1.dfsg) Recommends: matlab-support Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3_3.0.10.20130108-1~nd+1_all.deb Size: 3120 SHA256: 41b6b351b4ac0a248d73b78fa57c5c83dde39915440e5ed417705e5ca40a0edf SHA1: b606c60dbf8892cc8a00563e663341475e906125 MD5sum: 83e26619c95dfc5ea3b25910a1251174 Description: toolbox for vision research -- Matlab bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package exposes PTB-3 within Matlab environment. It also provides a convenience script ptb3-matlab to simplify running psychtoolbox in matlab. . For now it relies on -nonfree package providing binary builds of all PTB-3 bindings for Matlab. Package: matlab-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.10.20130108-1~nd+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 3938 Depends: neurodebian-popularity-contest, psychtoolbox-3-common (>> 3.0.10.20130108-1~nd+1.dfsg) Conflicts: psychtoolbox-3-common (<< 3.0.10.20130108-1~nd+1.dfsg.1) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3-nonfree_3.0.10.20130108-1~nd+1_i386.deb Size: 1333006 SHA256: c8d4ade5dec80bbe35961f353227987b302ae6b5401f721847f0cd30ada2d0e4 SHA1: 85271e4176f1600438b06860db768696e224e4e5 MD5sum: e491a4f7e969b48826d7f007bb424ba9 Description: toolbox for vision research -- Matlab binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Matlab built/supported/distributed by upstream. Package: mipav Version: 5.0.0.20100907-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 116 Pre-Depends: debconf (>= 0.5) | debconf-2.0 Depends: openjdk-6-jre | java6-runtime, libjogl-java, libjava3d-java, wget Homepage: http://mipav.cit.nih.gov/ Priority: extra Section: non-free/science Filename: pool/non-free/m/mipav/mipav_5.0.0.20100907-2_all.deb Size: 15272 SHA256: e5979bf557f27455dfe58a2244dbc066f0d5c276ab85cad013fbacc5ab303d60 SHA1: 61e581b87f680c0dbcce05e45ef290c4133fac55 MD5sum: 44ab2224b485d68657f13ac87d35c605 Description: quantitative analysis and visualization of medical images The MIPAV (Medical Image Processing, Analysis, and Visualization) application enables quantitative analysis and visualization of medical images of numerous modalities such as PET, MRI, CT, or microscopy. Using MIPAV's standard user-interface and analysis tools, researchers at remote sites can easily share research data and analyses, thereby enhancing their ability to research, diagnose, monitor, and treat medical disorders. MIPAV provides an interface for plug-ins and serves as the foundation for other projects (e.g. JIST). . This package provides downloader/installer for non-redistributable closed-source version of MIPAV and a convenience startup wrapper. You will have a choice of reviewing the license and accepting or declining it upon installation. Package: octave-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.10.20130108-1~nd+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1130 Depends: neurodebian-popularity-contest, psychtoolbox-3-common (>> 3.0.10.20130108-1~nd+1.dfsg) Conflicts: psychtoolbox-3-common (<< 3.0.10.20130108-1~nd+1.dfsg.1) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/octave-psychtoolbox-3-nonfree_3.0.10.20130108-1~nd+1_i386.deb Size: 407512 SHA256: afce57768cec7df3cebc47bb9c546a6a627b248464e82eb25501c5c36f53d607 SHA1: 0c9ee2048c35a742be4dae04ad32986172a5c921 MD5sum: 3134db054dd3dc8fd72c49016248cf13 Description: toolbox for vision research -- Octave binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Octave built/supported/distributed by upstream.