Package: fsl Version: 5.0.2-4~nd11.10+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 44 Depends: fsl-5.0 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl_5.0.2-4~nd11.10+1_all.deb Size: 19812 SHA256: 7f716032eb6abd515ce1c3391266471ab3e29f35e25660d129478712e209690e SHA1: a3a7756e838c8cfdc23af673442119f4ad71d542 MD5sum: 9c46ff2c251a9a9a8faa03a8635e483c Description: metapackage for the latest version of FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. Package: fsl-4.1 Source: fsl Version: 4.1.9-6~nd11.10+1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 27604 Depends: libc6 (>= 2.11), libgcc1 (>= 1:4.1.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libnewmat10ldbl, libnifti2, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.6), zlib1g (>= 1:1.1.4), mozilla-firefox | www-browser, tcsh | c-shell, tk8.4 (>= 8.4.7), tcl8.4 (>= 8.4.7), bc, dc Recommends: fsl-doc-4.1 (= 4.1.9-6~nd11.10+1), fsl-atlases, fslview Suggests: fsl-feeds, octave | octave3.2 (>= 3.2.4), dicomnifti, fsl-possum-data, fsl-first-data, gridengine-client Conflicts: fsl-doc-4.1 (<< 4.1.9-5~), fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl-4.1_4.1.9-6~nd11.10+1_amd64.deb Size: 10199730 SHA256: f3c0088340a491820ac0e7110a88bda2bdc4125ae70894f0b54af37f42fc48bf SHA1: 09bc47ee70c6469074fe6f9d42a42c2e0ea8094a MD5sum: 1a09f75efc17e829a9336425d23f55e7 Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-5.0 Source: fsl Version: 5.0.2-4~nd11.10+1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 36824 Depends: libc6 (>= 2.11), libgcc1 (>= 1:4.1.1), libgd2-noxpm (>= 2.0.36~rc1~dfsg) | libgd2-xpm (>= 2.0.36~rc1~dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libgiftiio0, libgomp1 (>= 4.2.1), libnewmat10ldbl, libnifti2, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.6), zlib1g (>= 1:1.1.4), mozilla-firefox | www-browser, tcsh | c-shell, tk8.4 (>= 8.4.7), tcl8.4 (>= 8.4.7), bc, dc, python Recommends: fsl-doc-5.0 (= 5.0.2-4~nd11.10+1), fsl-atlases, fslview Suggests: fsl-feeds, octave | octave3.2 (>= 3.2.4), dicomnifti, fsl-possum-data, fsl-first-data, gridengine-client Conflicts: fsl-doc-4.1 (<< 4.1.9-5~), fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl-5.0_5.0.2-4~nd11.10+1_amd64.deb Size: 13743854 SHA256: 70046ef539646d2b4bd8216263156468f9954e63f60f8aa517ca70d6d9c2c4eb SHA1: e256580b2ebfc280c004993207fa7a93b05d6010 MD5sum: d9f71ff9dda3dd5f6f8846ec43135682 Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Some FSL components require additional data packages (fsl-atlases, fsl-first-data, fsl-possum-data) that are currently available from the NeuroDebian repository only. For more information on how to obtain these data packages visit http://neuro.debian.net. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-doc-4.1 Source: fsl Version: 4.1.9-6~nd11.10+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18088 Recommends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-4.1_4.1.9-6~nd11.10+1_all.deb Size: 11202270 SHA256: 666abc910071c718811abe63c8e2121a2f6077c7aa24533d1af834df27135546 SHA1: 69366fa06b449e149fb48d17754ba8dcae90bfd9 MD5sum: 67f9a4891cd45414941a3704bd9ef7ef Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: fsl-doc-5.0 Source: fsl Version: 5.0.2-4~nd11.10+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 19216 Recommends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-5.0_5.0.2-4~nd11.10+1_all.deb Size: 14456640 SHA256: e52981c477f7bb3911921e5c7a92790b110dddf27a6a5778a1cc6bf47f49d9f3 SHA1: fe7e3ababbd4e0c02eb0b8df7670897530e8f185 MD5sum: e8779ef3aede8672182ace9746b43a0d Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: matlab-psychtoolbox-3 Source: psychtoolbox-3-nonfree Version: 3.0.10.20130114-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3 Depends: neurodebian-popularity-contest, matlab-psychtoolbox-3-nonfree (= 3.0.10.20130114-1~nd+1), psychtoolbox-3-common (>= 3.0.10.20130114-1~nd+1.dfsg) Recommends: matlab-support Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3_3.0.10.20130114-1~nd+1_all.deb Size: 3232 SHA256: ece668e55fed5793f8ef19204013ba887c7e6d8be39c1cd5e59f3a2da2d0128f SHA1: 4ca52bb32fdc614a5f0210a37594d25872b36422 MD5sum: deabdef380c37cbd15d7ba16fd5684d6 Description: toolbox for vision research -- Matlab bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package exposes PTB-3 within Matlab environment. It also provides a convenience script ptb3-matlab to simplify running psychtoolbox in matlab. . For now it relies on -nonfree package providing binary builds of all PTB-3 bindings for Matlab. Package: matlab-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.10.20130114-1~nd+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 3986 Depends: neurodebian-popularity-contest, psychtoolbox-3-common (>> 3.0.10.20130114-1~nd+1.dfsg) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3-nonfree_3.0.10.20130114-1~nd+1_amd64.deb Size: 1309048 SHA256: 9ce85991ded1566e2d801aa8502c94a3ce6cb27a2984c6b8ac9971a19cd5c0cf SHA1: bfcc3cab678b9bb884536170debeec04fcad5be4 MD5sum: 69a9b92ebcf0f5f0b93b884f2a357e81 Description: toolbox for vision research -- Matlab binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Matlab built/supported/distributed by upstream. Package: mipav Version: 5.0.0.20100907-2+nd11.10+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 64 Pre-Depends: debconf (>= 0.5) | debconf-2.0 Depends: openjdk-6-jre | java6-runtime, libjogl-java, libjava3d-java, wget Homepage: http://mipav.cit.nih.gov/ Priority: extra Section: non-free/science Filename: pool/non-free/m/mipav/mipav_5.0.0.20100907-2+nd11.10+1_all.deb Size: 15336 SHA256: fe4d8ac1493e775bf32fa0bbd5facb044963d309984a7276dba5dfb92b47cbe1 SHA1: 306d069f32ddeb4d2edce9c6236cc6b1342fcec8 MD5sum: bbee2be637a35d0a8c9bf739b01b0f4d Description: quantitative analysis and visualization of medical images The MIPAV (Medical Image Processing, Analysis, and Visualization) application enables quantitative analysis and visualization of medical images of numerous modalities such as PET, MRI, CT, or microscopy. Using MIPAV's standard user-interface and analysis tools, researchers at remote sites can easily share research data and analyses, thereby enhancing their ability to research, diagnose, monitor, and treat medical disorders. MIPAV provides an interface for plug-ins and serves as the foundation for other projects (e.g. JIST). . This package provides downloader/installer for non-redistributable closed-source version of MIPAV and a convenience startup wrapper. You will have a choice of reviewing the license and accepting or declining it upon installation. Package: octave-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.10.20130114-1~nd+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1297 Depends: neurodebian-popularity-contest, psychtoolbox-3-common (>> 3.0.10.20130114-1~nd+1.dfsg) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/octave-psychtoolbox-3-nonfree_3.0.10.20130114-1~nd+1_amd64.deb Size: 427946 SHA256: 423965b3283dfc2efa83162c79bc8d9e490c8ae1b1b9bf973b998e1561adfe5b SHA1: 7a25f14efb6d8f2b5cf5c1d5a9f360b6493c49ce MD5sum: 03984b71a419d6b6bdc9f65f40abebd2 Description: toolbox for vision research -- Octave binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Octave built/supported/distributed by upstream.