Package: fsl Version: 5.0.2-4~nd11.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 44 Depends: fsl-5.0 Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl_5.0.2-4~nd11.04+1_all.deb Size: 19816 SHA256: d9ca0cb67e90fc36398b2e6239f6bb839730ce0d3c968b1cd98a008760867966 SHA1: 1dbc041ebf2de56bc20a7fc3af374d3b74b0af53 MD5sum: 77ac6672d1583fc1a34769c0b154591f Description: metapackage for the latest version of FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. Package: fsl-doc-4.1 Source: fsl Version: 4.1.9-6~nd11.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18088 Recommends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-4.1_4.1.9-6~nd11.04+1_all.deb Size: 11202272 SHA256: 89975e41d5b5f30dfb00ae7cc8ab01e44c64801cffd463ac5abdde26ccf1259c SHA1: 83f92fb977b750e9c2b699b0926dcf282d4db1dc MD5sum: a6586f41fba46649f18fd6bda1b53c54 Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: fsl-doc-5.0 Source: fsl Version: 5.0.2-4~nd11.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 19216 Recommends: fslview-doc Provides: fsl-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc-5.0_5.0.2-4~nd11.04+1_all.deb Size: 14456638 SHA256: 92d894a7c621b72c0545fc10a7eac84e912639fb30b30a8db3a91e77c8906b7f SHA1: 33c59221f2fcbd556f350b506dcb981a8e305e6a MD5sum: 69929ed20cad61b46d6d2ea943a2e78f Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: matlab-psychtoolbox-3 Source: psychtoolbox-3-nonfree Version: 3.0.10.20130114-1~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3 Depends: neurodebian-popularity-contest, matlab-psychtoolbox-3-nonfree (= 3.0.10.20130114-1~nd+1), psychtoolbox-3-common (>= 3.0.10.20130114-1~nd+1.dfsg) Recommends: matlab-support Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3_3.0.10.20130114-1~nd+1_all.deb Size: 3232 SHA256: ece668e55fed5793f8ef19204013ba887c7e6d8be39c1cd5e59f3a2da2d0128f SHA1: 4ca52bb32fdc614a5f0210a37594d25872b36422 MD5sum: deabdef380c37cbd15d7ba16fd5684d6 Description: toolbox for vision research -- Matlab bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package exposes PTB-3 within Matlab environment. It also provides a convenience script ptb3-matlab to simplify running psychtoolbox in matlab. . For now it relies on -nonfree package providing binary builds of all PTB-3 bindings for Matlab. Package: virtual-mri-nonfree Source: vmri-nonfree Version: 3.2.14-1~nd11.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 3100 Depends: neurodebian-popularity-contest, openjdk-7-jre | java-runtime Homepage: http://www.iftm.de/elearning/vmri/idx_vmri.htm Priority: extra Section: non-free/science Filename: pool/non-free/v/vmri-nonfree/virtual-mri-nonfree_3.2.14-1~nd11.04+1_all.deb Size: 2051870 SHA256: 1f077ce5db8c0407fc2db1ccbeae50f9d3431b762d15a8be98eeff42f02dfa61 SHA1: 2c88c5d44898697ee9bc92f66bfae4a6ad4498dd MD5sum: 51aa261407650a555d38296bd70225b0 Description: Virtual Magnetic Resonance Imager A realistic simulation of magnetic reasonance imaging that allows for exploring the most relevant parameters of a scanner to aid training of students and doctors. . At the moment the pulse sequence classes SR, IR, SE, TSE, FLASH and FISP are implemented. Parameters, like TR, TE, TI, flip-angle or echo train length, can be adjusted. The choice of matrix size, FOV, slice-thickness and number of acquisitions affect the signal-to-noise ratio of the images. In a first step, the simulation calculates the signal intensity in the k-space. Aliasing- and motion-artifacts are simulated by modifying the k-space data. In a last step, a 2D-fouriertransform of the k-space data is performed. Window and center of the resulting images can be changed.