Package: fsl Version: 4.1.5.2-3~hardy.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 29136 Depends: bc, dc, fslview, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1-21), libgd2-noxpm (>= 2.0.35.dfsg) | libgd2-xpm (>= 2.0.35.dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libnewmat10ldbl, libnifti1 (>> 1.1.0-2), libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.2.1-4), mozilla-firefox | www-browser, tcl8.4 (>= 8.4.7), tcsh | c-shell, tk8.4 (>= 8.4.7), zlib1g (>= 1:1.2.3.3.dfsg-1) Recommends: fsl-atlases, fsl-doc (= 4.1.5.2-3~hardy.nd1) Suggests: dicomnifti, fsl-feeds, fsl-first-data, fsl-possum-data, gridengine-client, octave3.0 (>= 3.0.0) Conflicts: fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl_4.1.5.2-3~hardy.nd1_amd64.deb Size: 10626684 SHA256: 8e69207601df54527b751b12d9cc8c2340518fc7428885a8cb2709eb87af49f5 SHA1: e40f42b3673e12675d817ae0142056dcb5ef7c32 MD5sum: 8a1655ebfc8a670df9f7dfe26180a329 Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various commandline tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-doc Source: fsl Version: 4.1.5.2-3~hardy.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18312 Depends: fslview-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc_4.1.5.2-3~hardy.nd1_all.deb Size: 11149550 SHA256: fb49c6014d7b7a6342d78475aa34427f14e0a2855fc8c899c6313dc0e4d6b556 SHA1: efd8495319d03a432de847c6cd3a035d9baaeb19 MD5sum: 2a52a9f98b6efab1bce9fbfd52af3eea Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various commandline tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: matlab-psychtoolbox-3 Source: psychtoolbox-3-nonfree Version: 3.0.11.20131017-2~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4 Depends: neurodebian-popularity-contest, matlab-psychtoolbox-3-nonfree (= 3.0.11.20131017-2~nd+1), psychtoolbox-3-common (>= 3.0.11.20131017-2~nd+1.dfsg) Recommends: matlab-support Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3_3.0.11.20131017-2~nd+1_all.deb Size: 3766 SHA256: e7e51b61fe2e591422e37002292d1c812df39c71b2ff2118753f48c2532c179b SHA1: 0ad4f458fba8abebb78bd6bda32a2fc557c5e840 MD5sum: 3049e949dec35a98e503f67fee7f5618 Description: toolbox for vision research -- Matlab bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package exposes PTB-3 within Matlab environment. It also provides a convenience script ptb3-matlab to simplify running psychtoolbox in matlab. . See also http://www.psychtoolbox.org/UsingPsychtoolboxOnUbuntu for additional information about systems tune-up and initial configuration. . For now it relies on -nonfree package providing binary builds of all PTB-3 bindings for Matlab. Package: matlab-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.11.20131017-2~nd+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 4130 Depends: neurodebian-popularity-contest, psychtoolbox-3-lib (>= 3.0.11.20131017-2~nd+1.dfsg), psychtoolbox-3-common (>= 3.0.11.20131017-2~nd+1.dfsg), libx11-6, libxext6, libxfixes3, libxi6, freeglut3, libglew1.9, libgl1-mesa-glx, libxmu6, libxpm4 Recommends: libasound2, libdc1394-22, libfreenect0.1, libglib2.0-0, libglu1-mesa, libgstreamer-plugins-base0.10-0, libgstreamer0.10-0, libopenal1, libpciaccess0, libusb-1.0-0 (>= 2:1.0.9~), libxml2, libxrandr2, libxxf86vm1 Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3-nonfree_3.0.11.20131017-2~nd+1_amd64.deb Size: 892918 SHA256: f402d31c04dc844e79916c5c93dd9c74305a5ed9d48a4a4222d532b95c8efcc9 SHA1: ebb8eeb704ceb88dbcef2b1aae839335881b75a1 MD5sum: 74bf36a3fbf237273959dc12f036d194 Description: toolbox for vision research -- Matlab binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Matlab built/supported/distributed by upstream. Package: mipav Version: 5.0.0.20100907-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 116 Pre-Depends: debconf (>= 0.5) | debconf-2.0 Depends: openjdk-6-jre | java6-runtime, libjogl-java, libjava3d-java, wget Homepage: http://mipav.cit.nih.gov/ Priority: extra Section: non-free/science Filename: pool/non-free/m/mipav/mipav_5.0.0.20100907-2_all.deb Size: 15272 SHA256: e5979bf557f27455dfe58a2244dbc066f0d5c276ab85cad013fbacc5ab303d60 SHA1: 61e581b87f680c0dbcce05e45ef290c4133fac55 MD5sum: 44ab2224b485d68657f13ac87d35c605 Description: quantitative analysis and visualization of medical images The MIPAV (Medical Image Processing, Analysis, and Visualization) application enables quantitative analysis and visualization of medical images of numerous modalities such as PET, MRI, CT, or microscopy. Using MIPAV's standard user-interface and analysis tools, researchers at remote sites can easily share research data and analyses, thereby enhancing their ability to research, diagnose, monitor, and treat medical disorders. MIPAV provides an interface for plug-ins and serves as the foundation for other projects (e.g. JIST). . This package provides downloader/installer for non-redistributable closed-source version of MIPAV and a convenience startup wrapper. You will have a choice of reviewing the license and accepting or declining it upon installation. Package: octave-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.11.20131017-2~nd+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 1306 Depends: neurodebian-popularity-contest, octave-psychtoolbox-3 (>= 3.0.11.20131017-2~nd+1.dfsg), psychtoolbox-3-common (>= 3.0.11.20131017-2~nd+1.dfsg) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/octave-psychtoolbox-3-nonfree_3.0.11.20131017-2~nd+1_amd64.deb Size: 319758 SHA256: 424ad52869df17d63281ac8c8dbcfb93c7cf6e5ef5542378e8fabaaca848020e SHA1: 82521d2452a697cb271684ba02c3ab2ccb26c010 MD5sum: 4de13bcbb2bc58a73880989ec913be81 Description: toolbox for vision research -- Octave binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Octave built/supported/distributed by upstream.