Package: aghermann Version: 0.9.1.1-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1367 Depends: neurodebian-popularity-contest, libc6 (>= 2.8), libcairo2 (>= 1.2.4), libconfig++9, libfftw3-double3, libgcc1 (>= 1:4.1.1), libglib2.0-0 (>= 2.31.18), libgomp1 (>= 4.4), libgsl0ldbl (>= 1.9), libgtk-3-0 (>= 3.3.16), libitpp7, libpango1.0-0 (>= 1.14.0), libsamplerate0 (>= 0.1.7), libstdc++6 (>= 4.6), libunique-3.0-0 (>= 2.90.1), libvte-2.90-9 (>= 1:0.27.2) Suggests: edfbrowser Homepage: http://johnhommer.com/academic/code/aghermann Priority: optional Section: science Filename: pool/main/a/aghermann/aghermann_0.9.1.1-1~nd13.04+1_i386.deb Size: 618546 SHA256: 997708f790716be60cf23864de203622bc8a3d43609d26f3615282c1759f074f SHA1: d5862f5c4d56cb2e6e040a8c7d50254b3ae1b0a0 MD5sum: 5043562ab024df3f468bef32b2f91e8c Description: Sleep-research experiment manager Aghermann is a program designed around a common workflow in sleep-research, complete with scoring facility; cairo subpixel drawing on screen or to file; conventional PSD and EEG Micrcontinuity profiles; Independent Component Analysis; artifact detection; and Process S simulation following Achermann et al, 1993. Package: biosig-tools Source: biosig4c++ Version: 1.4.1-1~nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 679 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: science Filename: pool/main/b/biosig4c++/biosig-tools_1.4.1-1~nd12.10+1+nd13.04+1_i386.deb Size: 286554 SHA256: 5446015a9a5f3fcd651c5f2ebdadde043bb8b94c58dd55a7da6101f7846c568b SHA1: 1f757fb6f3a34accb2b54d913209f255e734bc3b MD5sum: 5c5585acc6f228680acdd1fb23209dae Description: format conversion tools for biomedical data formats Based on BioSig library, this package provides command line tools, such as . - save2gdf: converter between different file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF, BDF, CWFB. save2gdf can be also used to upload or retrieve data from a bscs server. Package: cnrun Version: 1.1.14-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 284 Depends: neurodebian-popularity-contest, libc6 (>= 2.8), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), libreadline6 (>= 6.0), libstdc++6 (>= 4.6), libxml2 (>= 2.6.27) Suggests: gnuplot Homepage: http://johnhommer.com/academic/code/cnrun Priority: optional Section: science Filename: pool/main/c/cnrun/cnrun_1.1.14-1~nd13.04+1_i386.deb Size: 122764 SHA256: e292a3bb725be4ceafde19408215fe49a156041e0a5625ed7d14904a7b0ac54b SHA1: 4c9053cc448b466e72718041094cb9e5b9ff6601 MD5sum: fdae57596bb0909de47637c614ccf5d2 Description: NeuroML-capable neuronal network simulator CNrun is a neuronal network model simulator, similar in purpose to NEURON except that individual neurons are not compartmentalised. It can read NeuroML files (e.g., as generated by neuroConstruct); provides a Hodgkin-Huxley neuron (plus some varieties), a Rall and Alpha-Beta synapses, Poisson, Van der Pol, Colpitts oscillators and regular pulse generator; external inputs and logging state variables. Uses a 6-5 Runge-Kutta integration method. Basic scripting and (if run interactively) context-aware autocompletion. Package: condor Version: 7.8.8~dfsg.1-2~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 13163 Depends: neurodebian-popularity-contest, debconf (>= 0.5) | debconf-2.0, libc6 (>= 2.7), libclassad3, libcomerr2 (>= 1.01), libcurl3 (>= 7.16.2), libexpat1 (>= 2.0.1), libgcc1 (>= 1:4.1.1), libglobus-common0 (>= 14), libglobus-ftp-control1 (>= 4), libglobus-gass-transfer2 (>= 7), libglobus-gram-client3 (>= 12), libglobus-gsi-credential1 (>= 5), libglobus-gsi-proxy-core0 (>= 6), libglobus-gsi-sysconfig1 (>= 5), libglobus-gss-assist3 (>= 8), libglobus-gssapi-gsi4 (>= 10), libglobus-io3 (>= 9), libglobus-rsl2 (>= 9), libglobus-xio0 (>= 3), libgsoap2, libk5crypto3 (>= 1.6.dfsg.2), libkrb5-3 (>= 1.10+dfsg~), libldap-2.4-2 (>= 2.4.7), libpcre3 (>= 8.10), libssl1.0.0 (>= 1.0.0), libstdc++6 (>= 4.6), libuuid1 (>= 2.16), libvirt0 (>= 0.5.0), python, perl, adduser, libdate-manip-perl Recommends: dmtcp Suggests: coop-computing-tools Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: science Filename: pool/main/c/condor/condor_7.8.8~dfsg.1-2~nd13.04+1_i386.deb Size: 4651814 SHA256: 5a681e8c813e45d2486fb2e2c47f06753aa66a0d9fe93a91c1e7e995170da2ba SHA1: 8035d35cf90efdaabf3685cd32fcba36e78aba8d MD5sum: af449510f8eb47cf95f5001f239dfb3a Description: distributed workload management system Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor; Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing systems, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package can set up an appropriate initial configuration at install time for a machine intended either as a member of an existing Condor pool or as a "Personal" (single machine) Condor pool. Package: condor-dbg Source: condor Version: 7.8.8~dfsg.1-2~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 32241 Depends: neurodebian-popularity-contest, condor (= 7.8.8~dfsg.1-2~nd13.04+1) Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: debug Filename: pool/main/c/condor/condor-dbg_7.8.8~dfsg.1-2~nd13.04+1_i386.deb Size: 12171464 SHA256: ca6466e10832adafb2149dacbf22d80796e80791d48d0cd0633ed240aee49ebf SHA1: b65dba7dd5970cc80223b6c5493c8c5737d19603 MD5sum: 0ff13457ed85e8ea0721c9cc810dd9db Description: distributed workload management system - debugging symbols Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor; Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing systems, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package provides the debugging symbols for Condor. Package: condor-dev Source: condor Version: 7.8.8~dfsg.1-2~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 1574 Depends: neurodebian-popularity-contest Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: devel Filename: pool/main/c/condor/condor-dev_7.8.8~dfsg.1-2~nd13.04+1_i386.deb Size: 422512 SHA256: e2b91f99d6fbb1270c282c785b28f85f67bf6a8263ff51e7cd40b04e278d56ec SHA1: be2609cd1c1f66bd8f4858b2103008a2cc0d02d0 MD5sum: 1e1322c512e653d94466e3bf34d454d8 Description: distributed workload management system - development files Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor; Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing systems, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package provides headers and libraries for development of Condor add-ons. Package: condor-doc Source: condor Version: 7.8.8~dfsg.1-2~nd13.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 6118 Depends: neurodebian-popularity-contest Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: doc Filename: pool/main/c/condor/condor-doc_7.8.8~dfsg.1-2~nd13.04+1_all.deb Size: 1459864 SHA256: 70fd12501ed9c750b5e148e55bc2335501daaaf6b77ff80dc728277c4a68f4f6 SHA1: c659a0a5d89550d08188b5f04afba63c467db9fd MD5sum: 32fab8d8211465476741f9d83cf1ec9e Description: distributed workload management system - documentation Like other full-featured batch systems, Condor provides a job queueing mechanism, scheduling policy, priority scheme, resource monitoring, and resource management. Users submit their serial or parallel jobs to Condor; Condor places them into a queue. It chooses when and where to run the jobs based upon a policy, carefully monitors their progress, and ultimately informs the user upon completion. . Unlike more traditional batch queueing systems, Condor can also effectively harness wasted CPU power from otherwise idle desktop workstations. Condor does not require a shared file system across machines - if no shared file system is available, Condor can transfer the job's data files on behalf of the user. . This package provides Condor's documentation in HTML and PDF format, as well as configuration and other examples. Package: debruijn Version: 1.6-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 130 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libfftw3-double3, libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1) Homepage: http://www.cfn.upenn.edu/aguirre/wiki/public:de_bruijn_software Priority: extra Section: science Filename: pool/main/d/debruijn/debruijn_1.6-1~nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 45456 SHA256: 4192fd988eb86f76ffd0203b8ea2b8681fbc16c95e3e24340e6157b29949f9ee SHA1: 46a6ca113905327dd09cced37d6afc65ba034996 MD5sum: 488b6f1d862438aec226e6f5a99d3134 Description: De Bruijn cycle generator Stimulus counter-balance is important for many experimental designs. This command-line software creates De Bruijn cycles, which are pseudo-random sequences with arbitrary levels of counterbalance. "Path-guided" de Bruijn cycles may also be created. These sequences encode a hypothesized neural modulation at specified temporal frequencies, and have enhanced detection power for BOLD fMRI experiments. Package: eeglab11-sampledata Source: eeglab11 Version: 11.0.0.0~b~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8109 Depends: neurodebian-popularity-contest Priority: extra Section: science Filename: pool/main/e/eeglab11/eeglab11-sampledata_11.0.0.0~b~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1_all.deb Size: 7224822 SHA256: e03522059ac09830cf48fd4f41780c0e6fcc7c4d1f3c331f213dbc6743c49565 SHA1: d9675743da0b53adc7682ebacfc6a4922f7a0880 MD5sum: 8a6520b56c5bf5302d61f9eb27b6a847 Description: sample EEG data for EEGLAB tutorials EEGLAB is sofwware for processing continuous or event-related EEG or other physiological data. . This package provide some tutorial data files shipped with the EEGLAB distribution. Package: eegview Version: 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 19 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libeegdev0, libmcpanel0 (>= 0.0), libxdffileio0 (>= 0.0) Homepage: http://cnbi.epfl.ch/software/eegview.html Priority: extra Section: science Filename: pool/main/e/eegview/eegview_0.0-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 10702 SHA256: b72cb86c50b070c6720c7efde62ec856bbf3f45815f7a9f3eb3783cfc8726c21 SHA1: 4d222c0608d0f212041a4f6a9c919d8e216f88c0 MD5sum: 9243c648fdf1e6538a7f3651c307c2c1 Description: Software to display EEG data in realtime This software allows one to display EEG signal in realtime as well as record them. It is the minimal recording panel needed to do simple experiment. Package: fail2ban Version: 0.8.10-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 402 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), lsb-base (>= 2.0-7) Recommends: iptables, whois, python-pyinotify Suggests: python-gamin, mailx, system-log-daemon Homepage: http://www.fail2ban.org Priority: optional Section: net Filename: pool/main/f/fail2ban/fail2ban_0.8.10-1~nd13.04+1_all.deb Size: 134664 SHA256: 3cf940095997f8e1ec5ecc7bdae05c24a81d3aca04a89ccbe6e39b9ca5bb2def SHA1: 04b6acf73e5193136964026922090288ebae4a55 MD5sum: 51d94e71407f984949be53685718e559 Description: ban hosts that cause multiple authentication errors Fail2ban monitors log files (e.g. /var/log/auth.log, /var/log/apache/access.log) and temporarily or persistently bans failure-prone addresses by updating existing firewall rules. Fail2ban allows easy specification of different actions to be taken such as to ban an IP using iptables or hostsdeny rules, or simply to send a notification email. . By default, it comes with filter expressions for various services (sshd, apache, qmail, proftpd, sasl etc.) but configuration can be easily extended for monitoring any other text file. All filters and actions are given in the config files, thus fail2ban can be adopted to be used with a variety of files and firewalls. Package: fslview Version: 4.0.1-2~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 5941 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libnewmat10ldbl, libnifti2, libqt4-qt3support (>= 4:4.5.3), libqt4-xml (>= 4:4.5.3), libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.7.0~beta1), libqwt5-qt4, libstdc++6 (>= 4.6), libvtk5.8, libvtk5.8-qt4 Recommends: fslview-doc, qt-assistant-compat Suggests: fsl-atlases Conflicts: fsl-fslview Replaces: fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/fslview Priority: optional Section: science Filename: pool/main/f/fslview/fslview_4.0.1-2~nd13.04+1_i386.deb Size: 2278974 SHA256: 79bfcf3729f0d1aa3ed5061dcc58df9a149cd85503eec3ab20be41e7d94d5bb3 SHA1: 270416e4c73176daf82a3ff7e4a22945cbe7b96f MD5sum: b878919366f45172f72e2f424c3afc23 Description: viewer for (f)MRI and DTI data This package provides a viewer for 3d and 4d MRI data as well as DTI images. FSLView is able to display ANALYZE and NIFTI files. The viewer supports multiple 2d viewing modes (orthogonal, lightbox or single slices), but also 3d volume rendering. Additionally FSLView is able to visualize timeseries and can overlay metrical and stereotaxic atlas data. . FSLView is part of FSL. Package: fslview-doc Source: fslview Version: 4.0.1-2~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2874 Depends: neurodebian-popularity-contest Homepage: http://www.fmrib.ox.ac.uk/fsl/fslview Priority: optional Section: doc Filename: pool/main/f/fslview/fslview-doc_4.0.1-2~nd13.04+1_all.deb Size: 2346538 SHA256: 21191091e9505223e32987c04eb1acbe3829ae341eef5525489f97a1a2d457bf SHA1: 33c8b353b6b9e7b5824704f2f58440ec2d4ad6f0 MD5sum: 66d92ab90f1579986c945c1cf4e2f90f Description: Documentation for FSLView This package provides the online documentation for FSLView. . FSLView is part of FSL. Package: glew-utils Source: glew Version: 1.9.0-3~bnd1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 344 Depends: neurodebian-popularity-contest, libglew1.9 (= 1.9.0-3~bnd1~nd13.04+1), libc6 (>= 2.4), libgl1-mesa-glx | libgl1, libx11-6 Replaces: libglew1.6 (<< 1.7) Homepage: http://glew.sourceforge.net Priority: optional Section: utils Filename: pool/main/g/glew/glew-utils_1.9.0-3~bnd1~nd13.04+1_i386.deb Size: 127012 SHA256: 08bb11d8f7b512ed0911c553efe5baa625d53ae5a61430cbf6ab23c5c8ef2820 SHA1: c4a7126aaa518d7706662f86e5524ec07be9b7cd MD5sum: 681ef1da2f98471900e80adab0716621 Description: OpenGL Extension Wrangler - utilities For more information about GLEW please refer to the description of the libglew-dev package. . This package contains the utilities which can be used to query the supported OpenGL extensions. Package: gmsl Version: 1.1.3-2~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 78 Depends: neurodebian-popularity-contest, make Homepage: http://gmsl.sourceforge.net/ Priority: optional Section: devel Filename: pool/main/g/gmsl/gmsl_1.1.3-2~nd13.04+1_all.deb Size: 16296 SHA256: 1330ca8671c52ce66d25a9c4e7342060578d234e9ff8d6d0d2c8d7ee5d4a069e SHA1: 8d7d2c207db0415ea391b037cc2854e453320dbd MD5sum: 1cca8ecb1df3278f8b133028c491886e Description: extra functions to extend functionality of GNU Makefiles The GNU Make Standard Library (GMSL) is a collection of functions implemented using native GNU Make functionality that provide list and string manipulation, integer arithmetic, associative arrays, stacks, and debugging facilities. . Note that despite the name of this project, this library is NOT standard and is NOT written or distributed by the GNU project. Package: impressive Version: 0.10.3+svn61-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 306 Depends: neurodebian-popularity-contest, python-opengl, python-pygame, python-imaging, poppler-utils | xpdf-utils (>= 3.02-2), perl Recommends: pdftk Suggests: ghostscript, latex-beamer Conflicts: keyjnote (<< 0.10.2r-0) Replaces: keyjnote (<< 0.10.2r-0) Provides: keyjnote Homepage: http://impressive.sourceforge.net/ Priority: optional Section: x11 Filename: pool/main/i/impressive/impressive_0.10.3+svn61-1~nd13.04+1_all.deb Size: 155300 SHA256: 159c171633fe48243aa2aa1b42c22cc6bc58f5cdcef3a7c52064018c6795da18 SHA1: 1cd3a49e36b88578c5ac668a511248b23c9f6c45 MD5sum: bb6cdb07320f44bd39856b18f751cbae Description: PDF presentation tool with eye candies Impressive is a program that displays presentation slides using OpenGL. Smooth alpha-blended slide transitions are provided for the sake of eye candy, but in addition to this, Impressive offers some unique tools that are really useful for presentations. Some of them are: * Overview screen * Highlight boxes * Spotlight effect * Presentation scripting and customization Package: incf-nidash-oneclick-clients Source: incf-nidash-oneclick Version: 2.0-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 28 Depends: neurodebian-popularity-contest, python (>= 2.5.0), python-dicom, dcmtk, python-httplib2 Homepage: http://xnat.incf.org/ Priority: extra Section: science Filename: pool/main/i/incf-nidash-oneclick/incf-nidash-oneclick-clients_2.0-1~nd12.04+1+nd12.10+1+nd13.04+1_all.deb Size: 9762 SHA256: 1b70856f5e29f4ff05b8faf310211265c11d0e9b6b78f8bd46101218ed941444 SHA1: 727d17fe0fae14cde238acfc92e4c478e60c84af MD5sum: 60d09f476bd15e66eb89d054f2be4951 Description: utility for pushing DICOM data to the INCF datasharing server A command line utility for anonymizing and sending DICOM data to the XNAT image database at the International Neuroinformatics Coordinating Facility (INCF). This tool is maintained by the INCF NeuroImaging DataSharing (NIDASH) task force. Package: insighttoolkit4-examples Source: insighttoolkit4 Version: 4.2.1-2~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2677 Depends: neurodebian-popularity-contest Suggests: libinsighttoolkit4-dev Conflicts: insighttoolkit-examples Replaces: insighttoolkit-examples Homepage: http://www.itk.org/ Priority: optional Section: devel Filename: pool/main/i/insighttoolkit4/insighttoolkit4-examples_4.2.1-2~nd12.10+1+nd13.04+1_all.deb Size: 2408122 SHA256: 65e6c7472a8a92b3ce0c45d17ffb3483e73a2dac7e24c4ba5175cbf31ca7ea99 SHA1: f8cb4f79f753bfd22d7a9a07470b3c8814a656dd MD5sum: 074628f846a92252222964aefd06d892 Description: Image processing toolkit for registration and segmentation - examples ITK is an open-source software toolkit for performing registration and segmentation. Segmentation is the process of identifying and classifying data found in a digitally sampled representation. Typically the sampled representation is an image acquired from such medical instrumentation as CT or MRI scanners. Registration is the task of aligning or developing correspondences between data. For example, in the medical environment, a CT scan may be aligned with a MRI scan in order to combine the information contained in both. . This package contains the source for example programs. Package: ipython01x Version: 0.13.2-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4665 Depends: neurodebian-popularity-contest, python-argparse, python-configobj, python-decorator, python-pexpect, python-simplegeneric, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Recommends: python-tornado (>= 2.1.0~), python-pygments, python-qt4, python-zmq, python-matplotlib Suggests: ipython01x-doc, python-gobject, python-gtk2, python-numpy, python-profiler Conflicts: ipython-common, python2.3-ipython, python2.4-ipython Replaces: ipython-common, python2.3-ipython, python2.4-ipython Homepage: http://ipython.org/ Priority: optional Section: python Filename: pool/main/i/ipython01x/ipython01x_0.13.2-1~nd12.10+1+nd13.04+1_all.deb Size: 1286080 SHA256: b735f17a5d75039971d01bafcae7e4eb301a795277414ecebd0064d375dad79c SHA1: a5085547449b24edb309ce17e432dde037a2d232 MD5sum: 0789a3e20beda824754862ced7bcdf5e Description: enhanced interactive Python shell IPython can be used as a replacement for the standard Python shell, or it can be used as a complete working environment for scientific computing (like Matlab or Mathematica) when paired with the standard Python scientific and numerical tools. It supports dynamic object introspections, numbered input/output prompts, a macro system, session logging, session restoring, complete system shell access, verbose and colored traceback reports, auto-parentheses, auto-quoting, and is embeddable in other Python programs. . This is a non-official, custom build of IPython post 0.11 with notebooks support. It provides IPython01X module thus not conflicting with system-wide installed IPython Package: ipython01x-doc Source: ipython01x Version: 0.13.2-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 16686 Depends: neurodebian-popularity-contest, libjs-jquery, ipython01x Homepage: http://ipython.org/ Priority: optional Section: doc Filename: pool/main/i/ipython01x/ipython01x-doc_0.13.2-1~nd12.10+1+nd13.04+1_all.deb Size: 7246220 SHA256: f98bd7d37f0204febffa5709f09eb5124cc1f376e53aa7d79d9538ad05cec0f7 SHA1: aa53cd815c0dc66eb3991d7ce8c5fd84b9b4fff9 MD5sum: 811804ffc2f242722732f1bfd66a90bf Description: enhanced interactive Python shell IPython can be used as a replacement for the standard Python shell, or it can be used as a complete working environment for scientific computing (like Matlab or Mathematica) when paired with the standard Python scientific and numerical tools. It supports dynamic object introspections, numbered input/output prompts, a macro system, session logging, session restoring, complete system shell access, verbose and colored traceback reports, auto-parentheses, auto-quoting, and is embeddable in other Python programs. . This package contains the documentation. . This is a non-official, custom build of IPython post 0.11 with workbooks support. It provides IPython01X module thus not conflicting with system-wide installed IPython Package: ipython01x-notebook Source: ipython01x Version: 0.13.2-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython01x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: python Filename: pool/main/i/ipython01x/ipython01x-notebook_0.13.2-1~nd12.10+1+nd13.04+1_all.deb Size: 910 SHA256: e712c2d41ec3b89d4633e58ccdc1f15893b9ac1296d4b9aae04e193ba2aae489 SHA1: 2afc184179ee99033f71f6b7f4cc6ac7e8deff23 MD5sum: 8a3db4e3c7b89648db43bb4aa8dc9b3d Description: enhanced interactive Python shell -- notebook dummy package This is a dummy package depending on ipython01x which ships notebook functionality inside. It is made so to stay in line to modularization of official ipython package in Debian. There is no real good reason to install this package. Package: ipython01x-parallel Source: ipython01x Version: 0.13.2-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython01x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: oldlibs Filename: pool/main/i/ipython01x/ipython01x-parallel_0.13.2-1~nd12.10+1+nd13.04+1_all.deb Size: 834 SHA256: 8dae62722abf91c76d20ca6d926382fa4197efa7d815c1973ab67ade497cd432 SHA1: b39f45f0df6f3fff98b23c54fb2cbadc6db01b1f MD5sum: aca06ab4c7848644ab4e9807593aa026 Description: enhanced interactive Python shell This is a transitional package and can be safely removed after the installation is complete. Package: ipython01x-qtconsole Source: ipython01x Version: 0.13.2-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython01x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: python Filename: pool/main/i/ipython01x/ipython01x-qtconsole_0.13.2-1~nd12.10+1+nd13.04+1_all.deb Size: 920 SHA256: 9438c824e04211686d5b9bb4c9a3a5eeedaa619255054650c85642c7e7a97395 SHA1: a1e7af1ada5039a1022157445773c5cf9c931597 MD5sum: af5c4bc8bc33c1c950d56f879b3d1e90 Description: enhanced interactive Python shell -- notebook dummy package This is a dummy package depending on ipython01x which ships qt console functionality inside. It is made so to stay in line to modularization of the official ipython package in Debian. There is no real good reason to install this package. Package: ipython1x Version: 1.0.0+1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 11705 Depends: neurodebian-popularity-contest, python-argparse, python-configobj, python-decorator, python-pexpect, python-simplegeneric, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Recommends: python-tornado (>= 2.1.0~), python-pygments, python-qt4, python-zmq, python-matplotlib Suggests: ipython1x-doc, python-gobject, python-gtk2, python-numpy, python-profiler Conflicts: ipython-common, python2.3-ipython, python2.4-ipython Replaces: ipython-common, python2.3-ipython, python2.4-ipython Homepage: http://ipython.org/ Priority: optional Section: python Filename: pool/main/i/ipython1x/ipython1x_1.0.0+1-1~nd13.04+1_all.deb Size: 4479512 SHA256: dce8dffac7bf7f476f0cdb919f55ff4dd50a1c74879cbb1337b0180ae247f40f SHA1: 634f42c1c56f4fafdbabe73abe759bdae39211d9 MD5sum: 846eeb820b4abe017830a661415b76ab Description: enhanced interactive Python shell IPython can be used as a replacement for the standard Python shell, or it can be used as a complete working environment for scientific computing (like Matlab or Mathematica) when paired with the standard Python scientific and numerical tools. It supports dynamic object introspections, numbered input/output prompts, a macro system, session logging, session restoring, complete system shell access, verbose and colored traceback reports, auto-parentheses, auto-quoting, and is embeddable in other Python programs. . This is a non-official, custom build of IPython post 0.11 with notebooks support. It provides IPython1X module thus not conflicting with system-wide installed IPython Package: ipython1x-doc Source: ipython1x Version: 1.0.0+1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 10333 Depends: neurodebian-popularity-contest, libjs-jquery, ipython1x Homepage: http://ipython.org/ Priority: optional Section: doc Filename: pool/main/i/ipython1x/ipython1x-doc_1.0.0+1-1~nd13.04+1_all.deb Size: 4198384 SHA256: b5c282a02126d03b6cf02fd61458dc2330156520429a8768132705fb8e3a6c16 SHA1: 92561ac945427aa3fd1d7abb77cb7e6fdfefa395 MD5sum: 5815700f9f6ae48001e8adfe1dd22d2b Description: enhanced interactive Python shell IPython can be used as a replacement for the standard Python shell, or it can be used as a complete working environment for scientific computing (like Matlab or Mathematica) when paired with the standard Python scientific and numerical tools. It supports dynamic object introspections, numbered input/output prompts, a macro system, session logging, session restoring, complete system shell access, verbose and colored traceback reports, auto-parentheses, auto-quoting, and is embeddable in other Python programs. . This package contains the documentation. . This is a non-official, custom build of IPython post 0.11 with workbooks support. It provides IPython1X module thus not conflicting with system-wide installed IPython Package: ipython1x-notebook Source: ipython1x Version: 1.0.0+1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython1x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: python Filename: pool/main/i/ipython1x/ipython1x-notebook_1.0.0+1-1~nd13.04+1_all.deb Size: 902 SHA256: 7e02fd5b51c6426d9aab5bdfdd3dde7b1020c774b8f96676a41ee404308141a6 SHA1: e58f4ee283074c8afedb376822f6b1af8d135059 MD5sum: e8508be5be49eb18119a73f02149ad21 Description: enhanced interactive Python shell -- notebook dummy package This is a dummy package depending on ipython1x which ships notebook functionality inside. It is made so to stay in line to modularization of official ipython package in Debian. There is no real good reason to install this package. Package: ipython1x-parallel Source: ipython1x Version: 1.0.0+1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython1x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: oldlibs Filename: pool/main/i/ipython1x/ipython1x-parallel_1.0.0+1-1~nd13.04+1_all.deb Size: 828 SHA256: ce8fc365ff1784b3cffdc7c9b859766a00c7130101c6e15ecc921526fef8fe88 SHA1: b2e4a21c79470e264b53474bd30e998f3d657a43 MD5sum: c9cc305a4cfbc4f6188686a77e0962f2 Description: enhanced interactive Python shell This is a transitional package and can be safely removed after the installation is complete. Package: ipython1x-qtconsole Source: ipython1x Version: 1.0.0+1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1 Depends: neurodebian-popularity-contest, ipython1x (>= 0.13.1~git33-gcfc5692-2~) Homepage: http://ipython.org/ Priority: extra Section: python Filename: pool/main/i/ipython1x/ipython1x-qtconsole_1.0.0+1-1~nd13.04+1_all.deb Size: 914 SHA256: 335d28af8f054537eb5519576f366e1ce8364fc59b674e2b54aa4a292cceb5ea SHA1: 6e6e1aad9d1190fd635bc1967a25e8de283326be MD5sum: bd6d776ee0d229ccd5bd406e12065d25 Description: enhanced interactive Python shell -- notebook dummy package This is a dummy package depending on ipython1x which ships qt console functionality inside. It is made so to stay in line to modularization of the official ipython package in Debian. There is no real good reason to install this package. Package: libbiosig-dev Source: biosig4c++ Version: 1.4.1-1~nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1338 Depends: neurodebian-popularity-contest, libbiosig1 (= 1.4.1-1~nd12.10+1+nd13.04+1) Homepage: http://biosig.sf.net/ Priority: extra Section: libdevel Filename: pool/main/b/biosig4c++/libbiosig-dev_1.4.1-1~nd12.10+1+nd13.04+1_i386.deb Size: 419246 SHA256: c53aba78f038c39cc92a5188a1903a519880ffdde9a0f2595685d51329140141 SHA1: 3c516bae6e8107ae7e8698d8cc846ab2f7c75044 MD5sum: 1785e9107d12148f9d4d44e197e0aca2 Description: I/O library for biomedical data - development files BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED . . This package provides header files and static library. Package: libbiosig1 Source: biosig4c++ Version: 1.4.1-1~nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 811 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1) Homepage: http://biosig.sf.net/ Priority: extra Section: libs Filename: pool/main/b/biosig4c++/libbiosig1_1.4.1-1~nd12.10+1+nd13.04+1_i386.deb Size: 329150 SHA256: f9524b9e759e8387c66a899534630359670b79477ceb91f2ef85a5a8a4e1a2a1 SHA1: f4469805a0c2dba70dd911166395a0b5d2b9b74d MD5sum: a2d53a9aa4e0f6a613d983453007994c Description: I/O library for biomedical data - dynamic library BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED . . This package provides dynamic library. Package: libbiosig1-dbg Source: biosig4c++ Version: 1.4.1-1~nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 323 Depends: neurodebian-popularity-contest, libbiosig1 (= 1.4.1-1~nd12.10+1+nd13.04+1) Homepage: http://biosig.sf.net/ Priority: extra Section: debug Filename: pool/main/b/biosig4c++/libbiosig1-dbg_1.4.1-1~nd12.10+1+nd13.04+1_i386.deb Size: 118630 SHA256: ab6435df49234f2ea8a701100e38f62d0b397193a5c6a393000ee5a6036161ad SHA1: 555aa921107113f80eb46506a19e389857cc9180 MD5sum: 78c64694935417b930f3a553af7e0305 Description: I/O library for biomedical data - debug symbols BioSig is a library for accessing files in several biomedical data formats (including EDF, BDF, GDF, BrainVision, BCI2000, CFWB, HL7aECG, SCP_ECG (EN1064), MFER, ACQ, CNT(Neuroscan), DEMG, EGI, EEG1100, FAMOS, SigmaPLpro, TMS32). The complete list of supported file formats is available at http://pub.ist.ac.at/~schloegl/biosig/TESTED . . This package provides debug symbols. Package: libclassad-dev Source: condor Version: 7.8.8~dfsg.1-2~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 2195 Depends: neurodebian-popularity-contest, libclassad3 (= 7.8.8~dfsg.1-2~nd13.04+1) Conflicts: libclassad0-dev Replaces: libclassad0-dev Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: libdevel Filename: pool/main/c/condor/libclassad-dev_7.8.8~dfsg.1-2~nd13.04+1_i386.deb Size: 485892 SHA256: 777f3159df72e008789dbfeeef1d5e528dceb88c88cd94f018106723720cbf08 SHA1: ea3a0f048b80f541191c374e815ebdb8cbf45be8 MD5sum: 8bca0e83cc2b4b1b3a6d783d5461b3ef Description: Condor classads expression language - development library Classified Advertisements (classads) are the lingua franca of Condor, used for describing jobs, workstations, and other resources. There is a protocol for evaluating whether two classads match, which is used by the Condor central manager to determine the compatibility of jobs, and workstations where they may be run. . This package provides the static library and header files. Package: libclassad3 Source: condor Version: 7.8.8~dfsg.1-2~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 828 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libpcre3 (>= 8.10), libstdc++6 (>= 4.6) Homepage: http://research.cs.wisc.edu/condor Priority: extra Section: science Filename: pool/main/c/condor/libclassad3_7.8.8~dfsg.1-2~nd13.04+1_i386.deb Size: 272528 SHA256: 99c9deaf5f869434303cd1772a9c744145950edf7620be04c23216799e3aaaaf SHA1: b543d53a74f478481d6feda8629be9b4f1bb1c55 MD5sum: fc31bd7f3431a7a1b9ee1b725f6b46ad Description: Condor classads expression language - runtime library Classified Advertisements (classads) are the lingua franca of Condor, used for describing jobs, workstations, and other resources. There is a protocol for evaluating whether two classads match, which is used by the Condor central manager to determine the compatibility of jobs, and workstations where they may be run. . This package provides the runtime library. Package: libglew1.9 Source: glew Version: 1.9.0-3~bnd1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 523 Pre-Depends: multiarch-support Depends: neurodebian-popularity-contest, libc6 (>= 2.1.3), libgl1-mesa-glx | libgl1 Suggests: glew-utils Conflicts: libglew1 Multi-Arch: same Homepage: http://glew.sourceforge.net Priority: optional Section: libs Filename: pool/main/g/glew/libglew1.9_1.9.0-3~bnd1~nd13.04+1_i386.deb Size: 157916 SHA256: 1c85496177948d16e9151c85a7771e2006717b89ea060898de1ca28635251453 SHA1: 9f3a07ae499ff27fda21a10b2fd04f96a759bbe6 MD5sum: 64c640ebce85af44e872ef813d6bd39b Description: OpenGL Extension Wrangler - runtime environment For more information about GLEW please refer to the description of the libglew-dev package. . This package contains the runtime support files. Package: libglew1.9-dbg Source: glew Version: 1.9.0-3~bnd1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 127 Depends: neurodebian-popularity-contest, libglew1.9 (= 1.9.0-3~bnd1~nd13.04+1) Homepage: http://glew.sourceforge.net Priority: extra Section: debug Filename: pool/main/g/glew/libglew1.9-dbg_1.9.0-3~bnd1~nd13.04+1_i386.deb Size: 40096 SHA256: 3e57bbebca5a45291f57602e3d4e95b7aaf9e60ef661a97b80f0fc2e02322de2 SHA1: 12f77d8caadf6afd1563ea8b4b04049d1178d448 MD5sum: d07d382f1736dc0fa9cb614d31bda7cc Description: OpenGL Extension Wrangler (debugging symbols) The OpenGL Extension Wrangler, GLEW for short, is a library that handles initialization of OpenGL extensions in a portable and simple way. Once the program initializes the library and checks the availability of extensions, it can safely call the entry points defined by the extension. Currently GLEW supports almost all the extensions found in the OpenGL extension registry (http://www.opengl.org/registry). . This package contains the debugging symbols for libglew1.9. Package: libglew1.9-dev Source: glew Version: 1.9.0-3~bnd1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1000 Depends: neurodebian-popularity-contest, libgl1-mesa-dev | libgl-dev, libglew1.9 (= 1.9.0-3~bnd1~nd13.04+1), libglu1-mesa-dev | libglu-dev Conflicts: libglew-dev, libglew1.6-dev Provides: libglew1.5-dev, libglew1.6-dev Multi-Arch: same Homepage: http://glew.sourceforge.net Priority: optional Section: libdevel Filename: pool/main/g/glew/libglew1.9-dev_1.9.0-3~bnd1~nd13.04+1_i386.deb Size: 153240 SHA256: 68c187cb56d03a5dd1697e71c62f200282b51a1143f9da53edf324c79beb99fc SHA1: 62e3b836806a76ac4bc0b602a0b2e25c99e312fc MD5sum: 0a47fa0c80395b75bd2a0f6a012cb556 Description: OpenGL Extension Wrangler - development environment The OpenGL Extension Wrangler, GLEW for short, is a library that handles initialization of OpenGL extensions in a portable and simple way. Once the program initializes the library and checks the availability of extensions, it can safely call the entry points defined by the extension. Currently GLEW supports almost all the extensions found in the OpenGL extension registry (http://www.opengl.org/registry). . This package contains the development documentation as well as the required header files. Package: libglewmx1.9 Source: glew Version: 1.9.0-3~bnd1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 467 Pre-Depends: multiarch-support Depends: neurodebian-popularity-contest, libc6 (>= 2.1.3), libgl1-mesa-glx | libgl1 Conflicts: libglew1 Multi-Arch: same Homepage: http://glew.sourceforge.net Priority: optional Section: libs Filename: pool/main/g/glew/libglewmx1.9_1.9.0-3~bnd1~nd13.04+1_i386.deb Size: 141952 SHA256: c40f0acb8f44d526e7dcd4eb0248aad01ab10a248f828b7feaf65e80e9693617 SHA1: 381862ca2a2a49e5de34ece9d44b03a47a6f1422 MD5sum: 869a860d7221cb448e384622cd8ddf5f Description: OpenGL Extension Wrangler (Multiple Rendering Contexts) For more information about GLEW please refer to the description of the libglewmx-dev package. . This package contains the runtime support files, built with GLEW_MX option, adding support for thread-safe usage of multiple rendering contexts. Package: libglewmx1.9-dbg Source: glew Version: 1.9.0-3~bnd1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 104 Depends: neurodebian-popularity-contest, libglewmx1.9 (= 1.9.0-3~bnd1~nd13.04+1) Homepage: http://glew.sourceforge.net Priority: extra Section: debug Filename: pool/main/g/glew/libglewmx1.9-dbg_1.9.0-3~bnd1~nd13.04+1_i386.deb Size: 32392 SHA256: 5fb80c744e5432e02085a864aa9085d661dfb85db1f9787d0ff8717a59368b73 SHA1: 4170f5942537e3fa8549bb6e1b31fbec67fa29e5 MD5sum: a582eb8042620e11c985b963611b92dd Description: OpenGL Extension Wrangler MX (debugging symbols) The OpenGL Extension Wrangler, GLEW for short, is a library that handles initialization of OpenGL extensions in a portable and simple way. Once the program initializes the library and checks the availability of extensions, it can safely call the entry points defined by the extension. Currently GLEW supports almost all the extensions found in the OpenGL extension registry (http://www.opengl.org/registry). . This package contains the debugging symbols for libglewmx1.9. Package: libglewmx1.9-dev Source: glew Version: 1.9.0-3~bnd1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 12 Depends: neurodebian-popularity-contest, libglew1.9-dev, libglewmx1.9 (= 1.9.0-3~bnd1~nd13.04+1) Conflicts: libglewmx-dev, libglewmx1.6-dev Provides: libglewmx1.5-dev, libglewmx1.6-dev Multi-Arch: same Homepage: http://glew.sourceforge.net Priority: optional Section: libdevel Filename: pool/main/g/glew/libglewmx1.9-dev_1.9.0-3~bnd1~nd13.04+1_i386.deb Size: 8832 SHA256: eb8eff4d598b7b2d7333fa71604f86c044bb632a84b8fc79742830ab90f47abe SHA1: ff28e7c220b6d03128c4e37f3068b9eb9797388a MD5sum: ce182eb97521e6572e03a5974954075d Description: OpenGL Extension Wrangler MX - development environment The OpenGL Extension Wrangler, GLEW for short, is a library that handles initialization of OpenGL extensions in a portable and simple way. Once the program initializes the library and checks the availability of extensions, it can safely call the entry points defined by the extension. Currently GLEW supports almost all the extensions found in the OpenGL extension registry (http://www.opengl.org/registry). . This package contains the development libraries compiled with GLEW_MX. Package: libinsighttoolkit4-dev Source: insighttoolkit4 Version: 4.2.1-2~nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 25779 Depends: neurodebian-popularity-contest, libinsighttoolkit4.2 (= 4.2.1-2~nd12.10+1+nd13.04+1), libgdcm2-dev Recommends: libfftw3-dev, uuid-dev Suggests: insighttoolkit4-examples Conflicts: libinsighttoolkit-dev, libinsighttoolkit3-dev Replaces: libinsighttoolkit-dev Homepage: http://www.itk.org/ Priority: optional Section: libdevel Filename: pool/main/i/insighttoolkit4/libinsighttoolkit4-dev_4.2.1-2~nd12.10+1+nd13.04+1_i386.deb Size: 5275850 SHA256: ba9ec061432045f550b273c5ec6a13761fd8dfc4dbd895fc7877489257dabd55 SHA1: 820969441a9927cfc14f1591066753b582045489 MD5sum: 9bf7547dc7e2deeed23c181f20674d05 Description: Image processing toolkit for registration and segmentation - development ITK is an open-source software toolkit for performing registration and segmentation. Segmentation is the process of identifying and classifying data found in a digitally sampled representation. Typically the sampled representation is an image acquired from such medical instrumentation as CT or MRI scanners. Registration is the task of aligning or developing correspondences between data. For example, in the medical environment, a CT scan may be aligned with a MRI scan in order to combine the information contained in both. . This package contains the development files needed to build your own ITK applications. Package: libinsighttoolkit4.2 Source: insighttoolkit4 Version: 4.2.1-2~nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 20377 Depends: neurodebian-popularity-contest, libc6 (>= 2.15), libgcc1 (>= 1:4.1.1), libgdcm2.2, libjpeg8 (>= 8c), libminc2-1, libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.6), zlib1g (>= 1:1.2.3.3) Homepage: http://www.itk.org/ Priority: optional Section: libs Filename: pool/main/i/insighttoolkit4/libinsighttoolkit4.2_4.2.1-2~nd12.10+1+nd13.04+1_i386.deb Size: 6820470 SHA256: a59274fc382af253677dd8ed17eba8172366f04d0ef41a084ac93e478a313832 SHA1: d31ef04af11dd05501abacfc3d7cf08247f84c15 MD5sum: 2fa4b45917da66a3c0870b38a8ece561 Description: Image processing toolkit for registration and segmentation - runtime ITK is an open-source software toolkit for performing registration and segmentation. Segmentation is the process of identifying and classifying data found in a digitally sampled representation. Typically the sampled representation is an image acquired from such medical instrumentation as CT or MRI scanners. Registration is the task of aligning or developing correspondences between data. For example, in the medical environment, a CT scan may be aligned with a MRI scan in order to combine the information contained in both. . This package contains the libraries needed to run ITK applications. Package: libmcpanel-dev Source: mcpanel Version: 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 4 Depends: neurodebian-popularity-contest, libmcpanel0 (= 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1) Homepage: http://cnbi.epfl.ch/software/mcpanel.html Priority: extra Section: libdevel Filename: pool/main/m/mcpanel/libmcpanel-dev_0.0-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 2408 SHA256: 409c1f4d348b0b4c335499d37c5a5d678f7588035bdc65c129f704f2c180b3e7 SHA1: 5cd4e3eb18218f8bd730d88e1d13df94428e5827 MD5sum: 108bd991c2e7f228f8042e2cdd270bc0 Description: Library to display multichannel data in realtime (Developement files) This package provides a library written in C implementing a set of widgets designed to view in realtime multichannels signals. Despite it has been initially design to view signals coming from a BIOSEMI Activetwo EEG system, it is totally system agnostic and any user of other system might find it useful. . This package contains the files needed to compile and link programs which use mcpanel Package: libmcpanel0 Source: mcpanel Version: 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 135 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), libgdk-pixbuf2.0-0 (>= 2.22.0), libglib2.0-0 (>= 2.31.8), libgtk2.0-0 (>= 2.14.0), libpango1.0-0 (>= 1.14.0), librtfilter1 (>= 1.0) Homepage: http://cnbi.epfl.ch/software/mcpanel.html Priority: extra Section: libs Filename: pool/main/m/mcpanel/libmcpanel0_0.0-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 48880 SHA256: 993a00a82f3fb5b5cebd48ae066b77557732de6411cf8de91c00af35b261b7b2 SHA1: b0a126e83cea00ebdaac09b87acab3357bd345dc MD5sum: 54cfefc125809ddfc2aabf732c55e39e Description: Library to display multichannel data in realtime This package provides a library written in C implementing a set of widgets designed to view in realtime multichannels signals. Despite it has been initially design to view signals coming from a BIOSEMI Activetwo EEG system, it is totally system agnostic and any user of other system might find it useful. Package: libmcpanel0-dbg Source: mcpanel Version: 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 16 Depends: neurodebian-popularity-contest, libmcpanel0 (= 0.0-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1) Homepage: http://cnbi.epfl.ch/software/mcpanel.html Priority: extra Section: debug Filename: pool/main/m/mcpanel/libmcpanel0-dbg_0.0-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 6572 SHA256: f30713afa2881e8b3f238a6921383e41e42876d77146ae7b0633a544b4c9515a SHA1: 5effc30d4e54a0618d220ca2f47f6dd2cdf60317 MD5sum: 0b9869971d31693cc119d8bd252559a0 Description: Library to display multichannel data in realtime (Debugging symbols) This package provides a library written in C implementing a set of widgets designed to view in realtime multichannels signals. Despite it has been initially design to view signals coming from a BIOSEMI Activetwo EEG system, it is totally system agnostic and any user of other system might find it useful. . This package contains the debugging information of the library. Package: libvrpn-dev Source: vrpn Version: 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 659 Depends: neurodebian-popularity-contest, libvrpn0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1), libvrpnserver0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1) Homepage: http://www.cs.unc.edu/Research/vrpn/ Priority: extra Section: libdevel Filename: pool/main/v/vrpn/libvrpn-dev_07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 174196 SHA256: c44f7ad756b31ea9f4563c4df4ceb56119ad37507f1c226c834975abc5e5e541 SHA1: a7350ed4f8bf1408d3ae518714546114797fb6c8 MD5sum: c858aae84df48b228adec9b743e1418c Description: Virtual Reality Peripheral Network (development files) The Virtual-Reality Peripheral Network (VRPN) is a set of classes within a library and a set of servers that are designed to implement a network-transparent interface between application programs and the set of physical devices (tracker, etc.) used in a virtual-reality (VR) system. The idea is to have a PC or other host at each VR station that controls the peripherals (tracker, button device, haptic device, analog inputs, sound, etc). VRPN provides connections between the application and all of the devices using the appropriate class-of-service for each type of device sharing this link. The application remains unaware of the network topology. Note that it is possible to use VRPN with devices that are directly connected to the machine that the application is running on, either using separate control programs or running all as a single program. . This package contains the development files Package: libvrpn0 Source: vrpn Version: 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 510 Depends: neurodebian-popularity-contest, libc6 (>= 2.15), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1) Homepage: http://www.cs.unc.edu/Research/vrpn/ Priority: extra Section: libs Filename: pool/main/v/vrpn/libvrpn0_07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 184454 SHA256: dd2c652780033dccc1f2de3e839218acbd6431d164bba42361d6dc0106c02cfc SHA1: 51c912031c38ea3b772979befc6615c8f8fe18c7 MD5sum: 06b8c7b0262283cd10c41e9ba399c968 Description: Virtual Reality Peripheral Network (client library) The Virtual-Reality Peripheral Network (VRPN) is a set of classes within a library and a set of servers that are designed to implement a network-transparent interface between application programs and the set of physical devices (tracker, etc.) used in a virtual-reality (VR) system. The idea is to have a PC or other host at each VR station that controls the peripherals (tracker, button device, haptic device, analog inputs, sound, etc). VRPN provides connections between the application and all of the devices using the appropriate class-of-service for each type of device sharing this link. The application remains unaware of the network topology. Note that it is possible to use VRPN with devices that are directly connected to the machine that the application is running on, either using separate control programs or running all as a single program. . This package contains the client shared library Package: libvrpnserver0 Source: vrpn Version: 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1214 Depends: neurodebian-popularity-contest, libc6 (>= 2.15), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.cs.unc.edu/Research/vrpn/ Priority: extra Section: libs Filename: pool/main/v/vrpn/libvrpnserver0_07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 425558 SHA256: 1c83bbe5d9b0ce8eebbc53eb108718597004382777f1e4a9b3ffe7e43be2e45a SHA1: 06faeefb4ae4622d25b5e20d4b73e6e27dacfc94 MD5sum: 2bc52092e7102fc7d0ad2480615b264b Description: Virtual Reality Peripheral Network (server library) The Virtual-Reality Peripheral Network (VRPN) is a set of classes within a library and a set of servers that are designed to implement a network-transparent interface between application programs and the set of physical devices (tracker, etc.) used in a virtual-reality (VR) system. The idea is to have a PC or other host at each VR station that controls the peripherals (tracker, button device, haptic device, analog inputs, sound, etc). VRPN provides connections between the application and all of the devices using the appropriate class-of-service for each type of device sharing this link. The application remains unaware of the network topology. Note that it is possible to use VRPN with devices that are directly connected to the machine that the application is running on, either using separate control programs or running all as a single program. . This package contains the shared library use in the VRPN server Package: libvw-dev Source: vowpal-wabbit Version: 7.3-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1898 Depends: neurodebian-popularity-contest, libvw0 (= 7.3-1~nd13.04+1) Homepage: http://hunch.net/~vw/ Priority: optional Section: libdevel Filename: pool/main/v/vowpal-wabbit/libvw-dev_7.3-1~nd13.04+1_i386.deb Size: 534990 SHA256: 5b59c8c0762a114de6373b1742be7ea4a98feb39b1490ba81031db7849afed56 SHA1: ad550d8f9fef93d89d8db81f6af78ffb6805142f MD5sum: d277632cd3b8ebf7af437f80c4370887 Description: fast and scalable online machine learning algorithm - development files Vowpal Wabbit is a fast online machine learning algorithm. The core algorithm is specialist gradient descent (GD) on a loss function (several are available). VW features: - flexible input data specification - speedy learning - scalability (bounded memory footprint, suitable for distributed computation) - feature pairing . This package contains development files needed to compile and link programs which use vowpal-wabbit's libraries. Package: libvw0 Source: vowpal-wabbit Version: 7.3-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 696 Depends: neurodebian-popularity-contest, libboost-program-options1.49.0 (>= 1.49.0-1), libc6 (>= 2.15), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0), zlib1g (>= 1:1.2.3.3) Homepage: http://hunch.net/~vw/ Priority: optional Section: libs Filename: pool/main/v/vowpal-wabbit/libvw0_7.3-1~nd13.04+1_i386.deb Size: 294636 SHA256: 63f8cc623c7469fbcebaa72851a1f772eba9055e3a43fd0e5b727cc73c6215ad SHA1: f538d64bc6a266c340427ce3ed70214100696768 MD5sum: d8399434ec1df3ab6bd5cbe2c17f50d5 Description: fast and scalable online machine learning algorithm - dynamic library Vowpal Wabbit is a fast online machine learning algorithm. The core algorithm is specialist gradient descent (GD) on a loss function (several are available). VW features: - flexible input data specification - speedy learning - scalability (bounded memory footprint, suitable for distributed computation) - feature pairing . This package contains vowpal-wabbit's dynamic libraries. Package: mriconvert Version: 2.0.250-1+nd1~nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2723 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0), libwxbase2.8-0 (>= 2.8.12.1), libwxgtk2.8-0 (>= 2.8.12.1) Homepage: http://lcni.uoregon.edu/~jolinda/MRIConvert/ Priority: optional Section: science Filename: pool/main/m/mriconvert/mriconvert_2.0.250-1+nd1~nd12.10+1+nd13.04+1_i386.deb Size: 891520 SHA256: 2de18fa186d056cf466118becced602c4992f7e1ed1e4bd01a3a5895ffccb681 SHA1: 0232db461a76b3b5266eb6814c9fb6944ed66a80 MD5sum: 0d8567ffe7d8de84f5a5ed76856f4b54 Description: medical image file conversion utility MRIConvert is a medical image file conversion utility that converts DICOM files to NIfTI 1.1, Analyze 7.5, SPM99/Analyze, BrainVoyager, and MetaImage volume formats. Package: mricron Version: 0.20130828.1~dfsg.1-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 14420 Depends: neurodebian-popularity-contest, libatk1.0-0 (>= 1.12.4), libc6 (>= 2.3.6-6~), libcairo2 (>= 1.2.4), libgdk-pixbuf2.0-0 (>= 2.22.0), libglib2.0-0 (>= 2.12.0), libgtk2.0-0 (>= 2.24.0), libpango1.0-0 (>= 1.14.0), libx11-6, mricron-data Suggests: mricron-doc, fsl Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: science Filename: pool/main/m/mricron/mricron_0.20130828.1~dfsg.1-1~nd13.04+1_i386.deb Size: 5567928 SHA256: 3c78c8ddd35cd80243540b330df941e3b1301d056ff25953d04c9f097ace5bea SHA1: 7c10b49297fc87b4cdc25118f22d09575dde7319 MD5sum: 1240f83c992e5e4008601b2351f3b51c Description: magnetic resonance image conversion, viewing and analysis This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . In addition to 'mricron', this package also provides 'dcm2nii' that supports converting DICOM and PAR/REC images into the NIfTI format, and 'npm' for non-parametric data analysis. Package: mricron-data Source: mricron Version: 0.20130828.1~dfsg.1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1710 Depends: neurodebian-popularity-contest Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: science Filename: pool/main/m/mricron/mricron-data_0.20130828.1~dfsg.1-1~nd13.04+1_all.deb Size: 1664524 SHA256: 179f46350fc86243f6af340e0ba92f4d8cbafb46d0c085be129f29f8ac846159 SHA1: cfa43237268d891d2472016ee77e8c7470298c30 MD5sum: cb9e0cda7870731a8d15ff9e016e002b Description: data files for MRIcron This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . This package provides data files for MRIcron, such as brain atlases, anatomy, and color schemes. Package: mricron-doc Source: mricron Version: 0.20130828.1~dfsg.1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1019 Depends: neurodebian-popularity-contest Homepage: http://www.cabiatl.com/mricro/mricron/index.html Priority: extra Section: doc Filename: pool/main/m/mricron/mricron-doc_0.20130828.1~dfsg.1-1~nd13.04+1_all.deb Size: 737510 SHA256: f6522a77a07ff991e70a16fbeb0a146e3744049373534f465c99da6da03aabe7 SHA1: fdfd8b08dfb6c00c23ceb6b8b139ba16d80e09a1 MD5sum: c16e9f95bb777af9a6fa7517187931d4 Description: data files for MRIcron This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change). . This package provides documentation for MRIcron in HTML format. Package: mrtrix Version: 0.2.11-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 7758 Depends: neurodebian-popularity-contest, libatkmm-1.6-1 (>= 2.22.1), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglib2.0-0 (>= 2.12.0), libglibmm-2.4-1c2a (>= 2.33.13), libglu1-mesa | libglu1, libgsl0ldbl (>= 1.9), libgtk2.0-0 (>= 2.8.0), libgtkglext1, libgtkmm-2.4-1c2a (>= 1:2.24.0), libsigc++-2.0-0c2a (>= 2.0.2), libstdc++6 (>= 4.6), zlib1g (>= 1:1.1.4) Suggests: mrtrix-doc, octave, matlab-support Homepage: http://www.brain.org.au/software/mrtrix Priority: extra Section: science Filename: pool/main/m/mrtrix/mrtrix_0.2.11-1~nd13.04+1_i386.deb Size: 2632628 SHA256: 71be405304692f102c0d51d78fcf40d9f55f81b0bc60d0cbe27a3eae7e4e3b3b SHA1: ac12a55317e2218584a83fcba9dc43efc040bd81 MD5sum: b57db0addc461c69138b7e9f5f6e3a76 Description: diffusion-weighted MRI white matter tractography Set of tools to perform diffusion-weighted MRI white matter tractography of the brain in the presence of crossing fibres, using Constrained Spherical Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance images in DICOM, ANALYZE, or uncompressed NIfTI format are supported. Package: mrtrix-doc Source: mrtrix Version: 0.2.11-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 3520 Depends: neurodebian-popularity-contest Homepage: http://www.brain.org.au/software/mrtrix Priority: extra Section: doc Filename: pool/main/m/mrtrix/mrtrix-doc_0.2.11-1~nd13.04+1_all.deb Size: 3317828 SHA256: c2fdca5d4469af324b396660001238f4289922a55cc45813d5bc97060df0fab8 SHA1: 2c21e943a5b80e042f73fdfd2b768fe556fe1110 MD5sum: dfa6593cfe9bb6d76eb51cd2de717334 Description: documentation for mrtrix Set of tools to perform diffusion-weighted MRI white matter tractography of the brain in the presence of crossing fibres, using Constrained Spherical Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance images in DICOM, ANALYZE, or uncompressed NIfTI format are supported. . This package provides the documentation in HTML format. Package: neurodebian-desktop Source: neurodebian Version: 0.31~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 142 Depends: ssh-askpass-gnome | ssh-askpass, desktop-base, gnome-icon-theme, neurodebian-popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-desktop_0.31~nd12.10+1+nd13.04+1_all.deb Size: 115378 SHA256: ea27d4b5413313f3bacf2636461311058dbf67dc2efb94a185ef21a9827b1d9b SHA1: c58ffc48769ca9bb0aa28e29fdeaf99458efc737 MD5sum: 6b4418b053f34c2d176f864e236d7599 Description: neuroscience research environment This package contains NeuroDebian artwork (icons, background image) and a NeuroDebian menu featuring most popular neuroscience tools automatically installed upon initial invocation. Package: neurodebian-dev Source: neurodebian Version: 0.31~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5762 Depends: devscripts, cowbuilder, neurodebian-keyring Recommends: python, zerofree, moreutils, time, ubuntu-keyring, debian-archive-keyring, apt-utils Suggests: virtualbox-ose, virtualbox-ose-fuse Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-dev_0.31~nd12.10+1+nd13.04+1_all.deb Size: 5351248 SHA256: 20b3496a3dddd71651fcc1663feba113c1682d212e17dd4cd1dfc1219494fe09 SHA1: 5385e81663517ad533cc9dcef295f0be2a24670e MD5sum: 35409b00fce63b6164ba9e753b5e693b Description: NeuroDebian development tools neuro.debian.net sphinx website sources and development tools used by NeuroDebian to provide backports for a range of Debian/Ubuntu releases. Package: neurodebian-guest-additions Source: neurodebian Version: 0.31~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 107 Pre-Depends: virtualbox-ose-guest-utils, virtualbox-ose-guest-x11, virtualbox-ose-guest-dkms Depends: sudo, neurodebian-desktop, gdm | lightdm, zenity Recommends: chromium-browser, update-manager-gnome, update-notifier Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-guest-additions_0.31~nd12.10+1+nd13.04+1_all.deb Size: 15242 SHA256: 203b9f9d26a55f432e5090e151ce7f09bed96f1329b45d9f9b1d13657859a8e3 SHA1: cfad4d5817354a6ce090b5c6c788b13893fc8e4a MD5sum: 0ca1609f39a61e9c517396686efcbd1c Description: NeuroDebian guest additions (DO NOT INSTALL OUTSIDE VIRTUALBOX) This package configures a Debian installation as a guest operating system in a VirtualBox-based virtual machine for NeuroDebian. . DO NOT install this package unless you know what you are doing! For example, installation of this package relaxes several security mechanisms. Package: neurodebian-keyring Source: neurodebian Version: 0.31~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 8 Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-keyring_0.31~nd12.10+1+nd13.04+1_all.deb Size: 7542 SHA256: afb7778e22dba6945648fe213e8f4cc9c208ae324810845a97c02b32faef7622 SHA1: 6596b8c49b4724805d269908dfc8eecddadbe012 MD5sum: 63b49c8e8f825316a79513eb14a29dda Description: GnuPG archive keys of the NeuroDebian archive The NeuroDebian project digitally signs its Release files. This package contains the archive keys used for that. Package: neurodebian-popularity-contest Source: neurodebian Version: 0.31~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 7 Depends: popularity-contest Homepage: http://neuro.debian.net Priority: optional Section: science Filename: pool/main/n/neurodebian/neurodebian-popularity-contest_0.31~nd12.10+1+nd13.04+1_all.deb Size: 6760 SHA256: 89585a170b94a85bc1241d995296770d8d9f81f6c366da97c308452d540980ce SHA1: d27b7a57312975cc31b0e8cac48f41215b9c2186 MD5sum: 045f0a04c84713469d0107bf73a37ee6 Description: Helper for NeuroDebian popularity contest submissions This package is a complement to the generic popularity-contest package to enable anonymous submission of usage statistics to NeuroDebian in addition to the popcon submissions to the underlying distribution (e.g. Debian or Ubuntu) popcon server. . Your participation in popcon is important for following reasons: - Popular packages receive more attention from developers, bugs are fixed faster and updates are provided quicker. - Assure that we do not drop support for a previous release of Debian or Ubuntu while are active users. - User statistics could be used by upstream research software developers to acquire funding for continued development. . It has an effect only if you have decided to participate in the Popularity Contest of your distribution, i.e. Debian or Ubuntu. You can always enable or disable your participation in popcon by running 'dpkg-reconfigure popularity-contest' as root. Package: nifti2dicom Version: 0.4.6-2~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2181 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgdcm2.2, libinsighttoolkit4.3, libstdc++6 (>= 4.6), nifti2dicom-data (= 0.4.6-2~nd13.04+1) Homepage: https://github.com/biolab-unige/nifti2dicom Priority: optional Section: science Filename: pool/main/n/nifti2dicom/nifti2dicom_0.4.6-2~nd13.04+1_i386.deb Size: 492048 SHA256: fa8dee26f0d30614171ddd264022d9688850a49db93d674de7f07d278cfad304 SHA1: 926640708f3e8d3a40cf17d6a6bf3edb0fd19b73 MD5sum: bba05c1593ab676708f6ecaf4ce1e79d Description: convert 3D medical images to DICOM 2D series Nifti2Dicom is a convertion tool that converts 3D NIfTI files (and other formats supported by ITK, including Analyze, MetaImage Nrrd and VTK) to DICOM. Unlike other conversion tools, it can import a DICOM file that is used to import the patient and study DICOM tags, and allows you to edit the accession number and other DICOM tags, in order to create a valid DICOM that can be imported in a PACS. . This package includes the command line tools. Package: nifti2dicom-data Source: nifti2dicom Version: 0.4.6-2~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 606 Depends: neurodebian-popularity-contest Homepage: https://github.com/biolab-unige/nifti2dicom Priority: optional Section: science Filename: pool/main/n/nifti2dicom/nifti2dicom-data_0.4.6-2~nd13.04+1_all.deb Size: 615168 SHA256: fece278a877eb7992684c0f84f93112a1edbd3d378a624202c80ca8a53216347 SHA1: bd83f73dfe317e221dbd28b4db9479971aae6860 MD5sum: 45a36880d6ed84bbe5c36705b331c45f Description: data files for nifti2dicom This package contains architecture-independent supporting data files required for use with nifti2dicom, such as such as documentation, icons, and translations. Package: nuitka Version: 0.4.6+ds-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1904 Depends: neurodebian-popularity-contest, g++-4.6 (>= 4.6.1) | g++-4.5 | g++-4.4 | clang (>= 3.0), scons (>= 2.0.0), python-dev (>= 2.6.6-2), python (>= 2.7.1-0ubuntu2) Recommends: python-lxml (>= 2.3), python-qt4 (>= 4.8.6) Suggests: ccache Homepage: http://nuitka.net Priority: optional Section: python Filename: pool/main/n/nuitka/nuitka_0.4.6+ds-1~nd13.04+1_all.deb Size: 509914 SHA256: 62105a7a2a02aabccaed42a64550c6a539e6838e7552fde52e56946ae65c93ef SHA1: 47f4a7f26d8ac82b077bf2ced14d982f2982da7f MD5sum: 4709743ea47b106942033a31280e200e Description: Python compiler with full language support and CPython compatibility This Python compiler achieves full language compatibility and compiles Python code into compiled objects that are not second class at all. Instead they can be used in the same way as pure Python objects. Package: numdiff Version: 5.8.1-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 876 Depends: neurodebian-popularity-contest, libc6 (>= 2.17), dpkg (>= 1.15.4) | install-info Homepage: http://nongnu.org/numdiff/ Priority: extra Section: science Filename: pool/main/n/numdiff/numdiff_5.8.1-1~nd13.04+1_i386.deb Size: 608042 SHA256: f33c3a8c9a0777274106fed8987f4b28561589903ebdc8c055f65728275f1562 SHA1: 1c198ea0c973fd4816dc1cc99fb0905c1c344c45 MD5sum: 2465319762d4c7eaccf495e3093276d0 Description: Compare similar files with numeric fields Numdiff is a console application that can be used to compare putatively similar files line by line and field by field, ignoring small numeric differences or/and different numeric formats. It is similar diff or wdiff, but it is aware of floating point numbers including complex and multi-precision numbers. Numdiff is useful to compare text files containing numerical fields, when testing or doing quality control in scientific computing or in numerical analysis. Package: octave-biosig Source: biosig4c++ Version: 1.4.1-1~nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 66 Depends: neurodebian-popularity-contest, octave (>= 3.4.3-1~), libbiosig1, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), liboctave1 (>= 3.6.2) Homepage: http://biosig.sf.net/ Priority: extra Section: science Filename: pool/main/b/biosig4c++/octave-biosig_1.4.1-1~nd12.10+1+nd13.04+1_i386.deb Size: 23656 SHA256: 1497c9919123fcb8e809a3a00d3f0468ebf01acc02b16c457cc02cd39e6a8aa5 SHA1: 6af4452d580400054065e6e0c6f725e9841f4f68 MD5sum: 0c809588befe1648db398b3b03b24560 Description: Octave bindings for BioSig library This package provides Octave bindings for BioSig library. Primary goal -- I/O interface to variety of biomedical file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF. Package: octave-psychtoolbox-3 Source: psychtoolbox-3 Version: 3.0.11.20131017.dfsg1-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2631 Depends: neurodebian-popularity-contest, octave (>= 3.4.3-1~), freeglut3, libasound2 (>= 1.0.16), libc6 (>= 2.7), libdc1394-22, libfreenect0.1 (>= 1:0.1.1), libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglew1.9 (>= 1.9.0), libglib2.0-0 (>= 2.12.0), libglu1-mesa | libglu1, libgstreamer-plugins-base0.10-0 (>= 0.10.23), libgstreamer0.10-0 (>= 0.10.24), liboctave1 (>= 3.6.2), libopenal1 (>= 1:1.13), libpciaccess0 (>= 0.8.0+git20071002), libstdc++6 (>= 4.1.1), libusb-1.0-0 (>= 2:1.0.9), libx11-6 (>= 2:1.2.99.901), libxfixes3, libxi6 (>= 2:1.2.99.4), libxrandr2 (>= 2:1.2.99.3), libxxf86vm1, psychtoolbox-3-common (= 3.0.11.20131017.dfsg1-1~nd13.04+1), psychtoolbox-3-lib (= 3.0.11.20131017.dfsg1-1~nd13.04+1) Recommends: octave-audio, octave-image, octave-optim, octave-signal, octave-statistics Provides: psychtoolbox, psychtoolbox-3 Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/octave-psychtoolbox-3_3.0.11.20131017.dfsg1-1~nd13.04+1_i386.deb Size: 866654 SHA256: e8c163c075e79279bb7c1305d083a392a0d38897043645018bf58e8ea865573d SHA1: de446fc388b7faad9d2b11ce26e89f42e3bc140c MD5sum: da78f3fafe25a699586c477ceccb8ba0 Description: toolbox for vision research -- Octave bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . See also http://www.psychtoolbox.org/UsingPsychtoolboxOnUbuntu for additional information about systems tune-up and initial configuration. . This package contains bindings for Octave. Package: opensesame Version: 0.27.4-2~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 26639 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-qt4, python-pygame (>= 1.8.1~), python-numpy (>= 1.3.0~), python-qscintilla2, gnome-icon-theme Recommends: python-serial (>= 2.3~), psychopy (>= 1.64.0), python-pyaudio (>= 0.2.4), python-imaging (>= 1.1.7), python-opengl (>= 3.0.1), expyriment (>= 0.5.2), ipython-qtconsole (>= 0.12), python-markdown Homepage: http://www.cogsci.nl/software/opensesame Priority: extra Section: science Filename: pool/main/o/opensesame/opensesame_0.27.4-2~nd13.04+1_all.deb Size: 25359352 SHA256: be473efbb1a3c74f86b5d05bd4d841ec3bee3c0e6e61451bd2aa3673834c9c22 SHA1: 1f1e9c48706fb0075bcdce01889f29457ab7efad MD5sum: db4fbffa3d4dc3eb61e2c40cc52fc9a4 Description: graphical experiment builder for the social sciences This graphical environment provides an easy to use, point-and-click interface for creating psychological experiments. In addition to a powerful sketchpad for creating visual stimuli, OpenSesame features a sampler and synthesizer for sound playback. For more complex tasks, OpenSesame supports Python scripting using the built-in editor with syntax highlighting. Package: packaging-tutorial Version: 0.8~nd0+nd13.04+1 Architecture: all Maintainer: Lucas Nussbaum Installed-Size: 1550 Priority: extra Section: doc Filename: pool/main/p/packaging-tutorial/packaging-tutorial_0.8~nd0+nd13.04+1_all.deb Size: 1488406 SHA256: 2080837f62cdfe9c3cdd6abbe134a1672da2a73335dd213fc8c80732244c40a9 SHA1: 15eaae4fe59ba4f53545db6406d8f51e61692eea MD5sum: 27e78cb1c4edc8953cf73e9a71350c36 Description: introduction to Debian packaging This tutorial is an introduction to Debian packaging. It teaches prospective developers how to modify existing packages, how to create their own packages, and how to interact with the Debian community. In addition to the main tutorial, it includes three practical sessions on modifying the 'grep' package, and packaging the 'gnujump' game and a Java library. Package: psychopy Version: 1.77.02.dfsg-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9277 Depends: neurodebian-popularity-contest, python (>= 2.4), python-support (>= 0.90.0), python-pyglet | python-pygame, python-opengl, python-numpy, python-scipy, python-matplotlib, python-lxml, python-configobj Recommends: python-wxgtk2.8, python-pyglet, python-pygame, python-openpyxl, python-imaging, python-serial, python-pyo, libavbin0, libxxf86vm1, ipython Suggests: python-iolabs, python-pyxid Homepage: http://www.psychopy.org Priority: optional Section: science Filename: pool/main/p/psychopy/psychopy_1.77.02.dfsg-1~nd13.04+1_all.deb Size: 5822162 SHA256: 24503fb0af66619bbcd7c512040ed05d41941e0ed8b8a14d85dd0ea2dc459066 SHA1: 4ba7fde803c919e7d6690214ceef16fe1fdbeb36 MD5sum: 23ecdae1c0f810f0f21fda3ab65bbc27 Description: environment for creating psychology stimuli in Python PsychoPy provides an environment for creating psychology stimuli using Python scripting language. It combines the graphical strengths of OpenGL with easy Python syntax to give psychophysics a free and simple stimulus presentation and control package. . The goal is to provide, for the busy scientist, tools to control timing and windowing and a simple set of pre-packaged stimuli and methods. PsychoPy features . - IDE GUI for coding in a powerful scripting language (Python) - Builder GUI for rapid development of stimulation sequences - Use of hardware-accelerated graphics (OpenGL) - Integration with Spectrascan PR650 for easy monitor calibration - Simple routines for staircase and constant stimuli experimental methods as well as curve-fitting and bootstrapping - Simple (or complex) GUIs via wxPython - Easy interfaces to joysticks, mice, sound cards etc. via PyGame - Video playback (MPG, DivX, AVI, QuickTime, etc.) as stimuli Python-Version: 2.7 Package: psychtoolbox-3-common Source: psychtoolbox-3 Version: 3.0.11.20131017.dfsg1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 49650 Depends: neurodebian-popularity-contest Recommends: subversion Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-common_3.0.11.20131017.dfsg1-1~nd13.04+1_all.deb Size: 19939134 SHA256: 56129b155a6597527f251af2f353c786a92beed15fffdd05ba62ce0761c2b166 SHA1: 62d81cebcf0258bb5caf5211b0bc0d07adda1e44 MD5sum: 5e82bbfae731d0043179fdfa45c0a43d Description: toolbox for vision research -- arch/interpreter independent part Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains architecture independent files (such as .m scripts) Package: psychtoolbox-3-dbg Source: psychtoolbox-3 Version: 3.0.11.20131017.dfsg1-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2387 Depends: neurodebian-popularity-contest, octave-psychtoolbox-3 (= 3.0.11.20131017.dfsg1-1~nd13.04+1) Homepage: http://psychtoolbox.org Priority: extra Section: debug Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-dbg_3.0.11.20131017.dfsg1-1~nd13.04+1_i386.deb Size: 840574 SHA256: 94abc123a3444056537810242d032e02f436fb236206536e7d59c930e59168e8 SHA1: b160289a7a4389017504202f1faa4ad0188e2738 MD5sum: 2b71a7acfd7f8a5888eece400b23a634 Description: toolbox for vision research -- debug symbols for binaries Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . To ease debugging and troubleshooting this package contains debug symbols for Octave bindings and other binaries. Package: psychtoolbox-3-lib Source: psychtoolbox-3 Version: 3.0.11.20131017.dfsg1-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 139 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libfontconfig1 (>= 2.9.0), libfreetype6 (>= 2.2.1), libgcc1 (>= 1:4.1.1), libgl1-mesa-glx | libgl1, libglu1-mesa | libglu1, libstdc++6 (>= 4.6) Recommends: gstreamer0.10-plugins-base, gstreamer0.10-plugins-good, gstreamer0.10-plugins-bad, gstreamer0.10-plugins-ugly Homepage: http://psychtoolbox.org Priority: extra Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-lib_3.0.11.20131017.dfsg1-1~nd13.04+1_i386.deb Size: 64534 SHA256: 2e96ca58c813c88ed023257cf0051c36bf3342d4b3ea7988df2aa7e4b457384d SHA1: 2570b6bd67b496a67d5902b7f48904efaa12005f MD5sum: b75ae5440b7d75a81a65cddfd86bb0d5 Description: toolbox for vision research -- arch-specific parts Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains additional binaries (tools/dynamic libraries) used by both Octave and Matlab frontends. Package: python-biosig Source: biosig4c++ Version: 1.4.1-1~nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 190 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python-support (>= 0.90.0), libbiosig1, libc6 (>= 2.4), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libpython2.7 (>= 2.7), libstdc++6 (>= 4.1.1), zlib1g (>= 1:1.1.4) Homepage: http://biosig.sf.net/ Priority: extra Section: python Filename: pool/main/b/biosig4c++/python-biosig_1.4.1-1~nd12.10+1+nd13.04+1_i386.deb Size: 55290 SHA256: 6537dfdaf7872f6d1a656a2102374c0079dbfb34a6702c787f9452d0acdbc1f0 SHA1: b43e85c2883f2a299aedcee4165507f5371f271d MD5sum: 6a90926a0847aeaae3684115886340ce Description: Python bindings for BioSig library This package provides Python bindings for BioSig library. Primary goal -- I/O interface to variety of biomedical file formats, including but not limited to SCP-ECG(EN1064), HL7aECG (FDA-XML), GDF, EDF. Package: python-brian Source: brian Version: 1.4.1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2336 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-brian-lib (>= 1.4.1-1~nd13.04+1), python-matplotlib (>= 0.90.1), python-numpy (>= 1.3.0), python-scipy (>= 0.7.0) Recommends: python-sympy Suggests: python-brian-doc, python-nose, python-cherrypy Homepage: http://www.briansimulator.org/ Priority: extra Section: python Filename: pool/main/b/brian/python-brian_1.4.1-1~nd13.04+1_all.deb Size: 549182 SHA256: 9eced6619fb84aea48b5a3fcbc2866e03897ae230c42de1363a01e9dd5b54f91 SHA1: 3ca4a641e5ded2df230142d5a767dacb02e2c1fd MD5sum: 1e3f0dd840e5c40b39c063a9ec88305d Description: simulator for spiking neural networks Brian is a clock-driven simulator for spiking neural networks. It is designed with an emphasis on flexibility and extensibility, for rapid development and refinement of neural models. Neuron models are specified by sets of user-specified differential equations, threshold conditions and reset conditions (given as strings). The focus is primarily on networks of single compartment neuron models (e.g. leaky integrate-and-fire or Hodgkin-Huxley type neurons). Features include: - a system for specifying quantities with physical dimensions - exact numerical integration for linear differential equations - Euler, Runge-Kutta and exponential Euler integration for nonlinear differential equations - synaptic connections with delays - short-term and long-term plasticity (spike-timing dependent plasticity) - a library of standard model components, including integrate-and-fire equations, synapses and ionic currents - a toolbox for automatically fitting spiking neuron models to electrophysiological recordings Package: python-brian-doc Source: brian Version: 1.4.1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 6811 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-brian Homepage: http://www.briansimulator.org/ Priority: extra Section: doc Filename: pool/main/b/brian/python-brian-doc_1.4.1-1~nd13.04+1_all.deb Size: 2247196 SHA256: d155efe0ac801294667b2a44eb58bcb3b0298e73ff97556f8829de8710828f81 SHA1: c247d3f619f28dacd1fe308e61c674ee3556c2f1 MD5sum: bc1ad205f7e25c67460319c0ce2c290c Description: simulator for spiking neural networks - documentation Brian is a clock-driven simulator for spiking neural networks. . This package provides user's manual (in HTML format), examples and demos. Package: python-brian-lib Source: brian Version: 1.4.1-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 124 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python-support (>= 0.90.0), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0) Homepage: http://www.briansimulator.org/ Priority: extra Section: python Filename: pool/main/b/brian/python-brian-lib_1.4.1-1~nd13.04+1_i386.deb Size: 52284 SHA256: e6f96fc6e7b864591abe7379dd4656162691f173315a0bfac9960ed15c02cff6 SHA1: 1d5d599ddb1fe1aafa1820c4aa58570399dc19fc MD5sum: fbef8a2a0459378d4eb5aca6b75b98b2 Description: simulator for spiking neural networks -- extensions Brian is a clock-driven simulator for spiking neural networks. . This package provides Python binary extensions. Package: python-dipy Source: dipy Version: 0.6.0-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2285 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-numpy, python-scipy, python-dipy-lib (>= 0.6.0-1~nd12.10+1+nd13.04+1) Recommends: python-matplotlib, python-vtk, python-nose, python-nibabel, python-tables Suggests: ipython Provides: python2.7-dipy Homepage: http://nipy.org/dipy Priority: extra Section: python Filename: pool/main/d/dipy/python-dipy_0.6.0-1~nd12.10+1+nd13.04+1_all.deb Size: 1586330 SHA256: 9ae0066ea9dd0827c19d4a38ef67434588eb327998c03f91b886f3d0c1ce6e18 SHA1: 6f4fe8d55b808fb237ff4d57616231d396cf1690 MD5sum: 79a32a472ed7bdf1918b72bb9b5a113d Description: toolbox for analysis of MR diffusion imaging data Dipy is a toolbox for the analysis of diffusion magnetic resonance imaging data. It features: - Reconstruction algorithms, e.g. GQI, DTI - Tractography generation algorithms, e.g. EuDX - Intelligent downsampling of tracks - Ultra fast tractography clustering - Resampling datasets with anisotropic voxels to isotropic - Visualizing multiple brains simultaneously - Finding track correspondence between different brains - Warping tractographies into another space, e.g. MNI space - Reading many different file formats, e.g. Trackvis or NIfTI - Dealing with huge tractographies without memory restrictions - Playing with datasets interactively without storing Python-Version: 2.7 Package: python-dipy-doc Source: dipy Version: 0.6.0-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5080 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-dipy Homepage: http://nipy.org/dipy Priority: extra Section: doc Filename: pool/main/d/dipy/python-dipy-doc_0.6.0-1~nd12.10+1+nd13.04+1_all.deb Size: 3615252 SHA256: 3970b0bb31d6fd6b2c731e67565849f92be42444129498f103111ff56212e1da SHA1: 3dd6d5bb930e50c23924f935a27d73b34ce2f7e9 MD5sum: 0e5cd4baee579fba43b730871827fa4f Description: toolbox for analysis of MR diffusion imaging data -- documentation Dipy is a toolbox for the analysis of diffusion magnetic resonance imaging data. . This package provides the documentation in HTML format. Package: python-dipy-lib Source: dipy Version: 0.6.0-1~nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 877 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7), python-support (>= 0.90.0), libc6 (>= 2.4) Provides: python2.7-dipy-lib Homepage: http://nipy.org/dipy Priority: extra Section: python Filename: pool/main/d/dipy/python-dipy-lib_0.6.0-1~nd12.10+1+nd13.04+1_i386.deb Size: 345614 SHA256: 721ca0ae9fed603ed65c13096165cb701c00c5f88a25024a6b275deb1211dc7a SHA1: bdd916c991e89f568af0388f4802a8455f270b29 MD5sum: f484818ae27f32d8eb2b97dc304a9956 Description: toolbox for analysis of MR diffusion imaging data -- extensions Dipy is a toolbox for the analysis of diffusion magnetic resonance imaging data. . This package provides architecture-dependent builds of the extensions. Python-Version: 2.7 Package: python-joblib Source: joblib Version: 0.7.1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 182 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0) Recommends: python-numpy, python-nose, python-simplejson Homepage: http://packages.python.org/joblib/ Priority: optional Section: python Filename: pool/main/j/joblib/python-joblib_0.7.1-1~nd13.04+1_all.deb Size: 54852 SHA256: 34de23a238a4de92b1b8ccf9459e78ff31134f79260dde329140d39488198105 SHA1: 1ca2b03462493c6e6cbeef719af1bab45c022e93 MD5sum: 258dd84c5aec75e280895604964962c9 Description: tools to provide lightweight pipelining in Python Joblib is a set of tools to provide lightweight pipelining in Python. In particular, joblib offers: - transparent disk-caching of the output values and lazy re-evaluation (memoize pattern) - easy simple parallel computing - logging and tracing of the execution . Joblib is optimized to be fast and robust in particular on large, long-running functions and has specific optimizations for numpy arrays. Package: python-mdp Source: mdp Version: 3.3+git6-g7bbd889-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1495 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy Recommends: python-scipy, python-libsvm, python-joblib, python-scikits-learn | python-sklearn, python-pp Suggests: python-py, shogun-python-modular Enhances: python-mvpa Homepage: http://mdp-toolkit.sourceforge.net/ Priority: optional Section: python Filename: pool/main/m/mdp/python-mdp_3.3+git6-g7bbd889-1~nd12.10+1+nd13.04+1_all.deb Size: 478658 SHA256: f64b49dd6826c89a25593bc9a05d154599fed318b5bb9a3c8e99c6ce9ba6dd5a SHA1: 1d63f0f452c4d60af96494263e7f75b724ee7a56 MD5sum: 4d9fb528cbf2c338a7562b20dcfd8a4d Description: Modular toolkit for Data Processing Python data processing framework for building complex data processing software by combining widely used machine learning algorithms into pipelines and networks. Implemented algorithms include: Principal Component Analysis (PCA), Independent Component Analysis (ICA), Slow Feature Analysis (SFA), Independent Slow Feature Analysis (ISFA), Growing Neural Gas (GNG), Factor Analysis, Fisher Discriminant Analysis (FDA), and Gaussian Classifiers. . This package contains MDP for Python 2. Package: python-mvpa2 Source: pymvpa2 Version: 2.2.0-3~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4242 Depends: neurodebian-popularity-contest, python (>= 2.6), python-numpy, python-support (>= 0.90.0), python-mvpa2-lib (>= 2.2.0-3~nd13.04+1) Recommends: python-h5py, python-lxml, python-matplotlib, python-mdp, python-nibabel, python-psutil, python-psyco, python-pywt, python-reportlab, python-scipy, python-sklearn, shogun-python-modular, liblapack-dev Suggests: fslview, fsl, python-mvpa2-doc, python-nose, python-openopt, python-rpy2 Provides: python2.7-mvpa2 Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa2/python-mvpa2_2.2.0-3~nd13.04+1_all.deb Size: 2400384 SHA256: 474324cdfe989a5ddd084222baf761d0b27a5202532fc64d68cf92c3c06bc8b0 SHA1: 63155a01d54d39adb0f97b11d3fee03172489002 MD5sum: 2f8b981072cb0e2120acd3e12f4c3455 Description: multivariate pattern analysis with Python v. 2 PyMVPA eases pattern classification analyses of large datasets, with an accent on neuroimaging. It provides high-level abstraction of typical processing steps (e.g. data preparation, classification, feature selection, generalization testing), a number of implementations of some popular algorithms (e.g. kNN, Ridge Regressions, Sparse Multinomial Logistic Regression), and bindings to external machine learning libraries (libsvm, shogun). . While it is not limited to neuroimaging data (e.g. fMRI, or EEG) it is eminently suited for such datasets. . This is a package of PyMVPA v.2. Previously released stable version is provided by the python-mvpa package. Python-Version: 2.7 Package: python-mvpa2-doc Source: pymvpa2 Version: 2.2.0-3~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 17216 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Suggests: python-mvpa2, python-mvpa2-tutorialdata, ipython-notebook Homepage: http://www.pymvpa.org Priority: optional Section: doc Filename: pool/main/p/pymvpa2/python-mvpa2-doc_2.2.0-3~nd13.04+1_all.deb Size: 5138256 SHA256: 0dac0291a99608f696551dedb0643df38d033792ea0ef02ca3bcf02e4bd265cd SHA1: a93621906b6b7f7634c6515d4c68e6a706ba325e MD5sum: a3e0d1b142a97bb3d997496fafccfac4 Description: documentation and examples for PyMVPA v. 2 This is an add-on package for the PyMVPA framework. It provides a HTML documentation (tutorial, FAQ etc.), and example scripts. In addition the PyMVPA tutorial is also provided as IPython notebooks. Package: python-mvpa2-lib Source: pymvpa2 Version: 2.2.0-3~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 104 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), libsvm3, python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python-support (>= 0.90.0) Provides: python2.7-mvpa2-lib Homepage: http://www.pymvpa.org Priority: optional Section: python Filename: pool/main/p/pymvpa2/python-mvpa2-lib_2.2.0-3~nd13.04+1_i386.deb Size: 49090 SHA256: 6a6175a5c69fe12137d3355d847364ff94a8d5f2098c960e59ac5697f202e8ac SHA1: 278c17b2a800c5b8349ecd40bc2b87b193b755b6 MD5sum: 365605da8a5ba3b199e688e78f2f4628 Description: low-level implementations and bindings for PyMVPA v. 2 This is an add-on package for the PyMVPA framework. It provides a low-level implementation of an SMLR classifier and custom Python bindings for the LIBSVM library. . This is a package of a development snapshot. The latest released version is provided by the python-mvpa-lib package. Python-Version: 2.7 Package: python-neo Source: neo Version: 0.3.1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2485 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy (>= 1:1.3~), python-quantities (>= 0.9.0~) Recommends: python-scipy (>= 0.8~), python-tables (>= 2.2~), libjs-jquery, libjs-underscore Suggests: python-nose Homepage: http://neuralensemble.org/trac/neo Priority: extra Section: python Filename: pool/main/n/neo/python-neo_0.3.1-1~nd13.04+1_all.deb Size: 1441916 SHA256: 744b6918fbe2ce203d0154616a00c67d0a5e90f2876b71e88bed02acc6fc985a SHA1: 06a6c04273190807ef947492ff649ff48786b658 MD5sum: 0f97327aa5f6b891fe157fb959ce9f5a Description: Python IO library for electrophysiological data formats NEO stands for Neural Ensemble Objects and is a project to provide common classes and concepts for dealing with electro-physiological (in vivo and/or simulated) data to facilitate collaborative software/algorithm development. In particular Neo provides: a set a classes for data representation with precise definitions, an IO module with a simple API, documentation, and a set of examples. . NEO offers support for reading data from numerous proprietary file formats (e.g. Spike2, Plexon, AlphaOmega, BlackRock, Axon), read/write support for various open formats (e.g. KlustaKwik, Elan, WinEdr, WinWcp, PyNN), as well as support common file formats, such as HDF5 with Neo-structured content (NeoHDF5, NeoMatlab). . Neo's IO facilities can be seen as a pure-Python and open-source Neuroshare replacement. Package: python-neurosynth Source: neurosynth Version: 0.3-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 83 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy, python-scipy, python-nibabel, python-ply Recommends: python-nose, fsl-mni152-templates Suggests: python-testkraut Homepage: http://neurosynth.org Priority: extra Section: python Filename: pool/main/n/neurosynth/python-neurosynth_0.3-1~nd13.04+1_all.deb Size: 32522 SHA256: 6f15ee7476bbfde85706a4c2f3d03cda6040abdbd999b3894242c38a6b5e5e15 SHA1: 6d50b9fdc6cc95d65b5a36dff938dc20a53f85a6 MD5sum: 490b03520a88f2609b103c8f9e81d538 Description: large-scale synthesis of functional neuroimaging data NeuroSynth is a platform for large-scale, automated synthesis of functional magnetic resonance imaging (fMRI) data extracted from published articles. This Python module at the moment provides functionality for processing the database of collected terms and spatial coordinates to generate associated spatial statistical maps. Package: python-nibabel Source: nibabel Version: 1.3.0-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4152 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0), python-numpy, python-scipy Recommends: python-dicom, python-fuse Suggests: python-nibabel-doc Provides: python2.7-nibabel Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: python Filename: pool/main/n/nibabel/python-nibabel_1.3.0-1~nd12.04+1+nd12.10+1+nd13.04+1_all.deb Size: 1816392 SHA256: 5471327f1b831976c7f5fd2e640cea5ad293f6fe3d5dc5c90cad27576dd31c7b SHA1: 24a7b6779e812cb2e0141392940f64f5f9654eab MD5sum: c0d6269ba81e7cde8a02b4ecf5d09a9a Description: Python bindings to various neuroimaging data formats NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package also provides a commandline tools: . - dicomfs - FUSE filesystem on top of a directory with DICOMs - nib-ls - 'ls' for neuroimaging files - parrec2nii - for conversion of PAR/REC to NIfTI images Python-Version: 2.7 Package: python-nibabel-doc Source: nibabel Version: 1.3.0-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2446 Depends: neurodebian-popularity-contest, libjs-jquery Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: doc Filename: pool/main/n/nibabel/python-nibabel-doc_1.3.0-1~nd12.04+1+nd12.10+1+nd13.04+1_all.deb Size: 441852 SHA256: c393586f5d860ad1367c994624f64e56f5142eb810b1c7eb398b3a4514ba1e59 SHA1: d709ae60593669a10a6ba1bce7e3597b4ec0cdf9 MD5sum: debae32aab1b2c3078bcd33a7e0a3dbd Description: documentation for NiBabel NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package provides the documentation in HTML format. Package: python-nipype Source: nipype Version: 0.8-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2657 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-scipy, python-simplejson, python-traits (>= 4.0) | python-traits4, python-nibabel (>= 1.0.0~), python-networkx (>= 1.3), python-cfflib Recommends: ipython, python-nose, graphviz Suggests: fsl, afni, python-nipy, slicer, matlab-spm8, python-pyxnat Provides: python2.7-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: python Filename: pool/main/n/nipype/python-nipype_0.8-1~nd13.04+1_all.deb Size: 591950 SHA256: 2f812b136b34da77235d0f3536820e7056c1335309e1f87e47a6a125c1d90adf SHA1: 5b406227d3e557d7df9b1067f72214a8a8ea8118 MD5sum: 4ea3dd23e9379c15860dc677ff035ae1 Description: Neuroimaging data analysis pipelines in Python Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). Package: python-nipype-doc Source: nipype Version: 0.8-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 15049 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-nipype Homepage: http://nipy.sourceforge.net/nipype/ Priority: optional Section: doc Filename: pool/main/n/nipype/python-nipype-doc_0.8-1~nd13.04+1_all.deb Size: 7167192 SHA256: 88f01a903b608aee3333ea08dde51349fa3a4f52444bc9f000244d6054d747d5 SHA1: 28d42e2f21fce48fb3238a4eb8376d31d4592227 MD5sum: 291cfb0012df032c615e4798889b37fb Description: Neuroimaging data analysis pipelines in Python -- documentation Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). . This package contains Nipype examples and documentation in various formats. Package: python-openpyxl Source: openpyxl Version: 1.6.1+hg2-g4bff8e3-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 291 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0) Recommends: python-nose Homepage: http://bitbucket.org/ericgazoni/openpyxl/ Priority: optional Section: python Filename: pool/main/o/openpyxl/python-openpyxl_1.6.1+hg2-g4bff8e3-1~nd12.10+1+nd13.04+1_all.deb Size: 62100 SHA256: 64a8cf4cf5747a7cf77d347a415106897b547e7a88668496a480061112af091d SHA1: 7c45f18602568f0d607cc9f0ed352f9008afdc55 MD5sum: 70aa1ace74bb64e286215aeb426e1f0d Description: module to read/write OpenXML xlsx/xlsm files Openpyxl is a pure Python module to read/write Excel 2007 (OpenXML) xlsx/xlsm files. Package: python-pandas Source: pandas Version: 0.12.0-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5629 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-dateutil, python-tz, python-numpy (>= 1:1.6~), python-pandas-lib (>= 0.12.0-1~nd13.04+1), python-six Recommends: python-scipy, python-matplotlib, python-tables, python-numexpr, python-xlrd, python-statsmodels, python-openpyxl, python-xlwt, python-bs4, python-html5lib Suggests: python-pandas-doc Provides: python2.7-pandas Homepage: http://pandas.sourceforge.net Priority: optional Section: python Filename: pool/main/p/pandas/python-pandas_0.12.0-1~nd13.04+1_all.deb Size: 1080646 SHA256: 79f11d9c552af82969f16ce6d2ab563a6a248d9ecc055669f0d8fdb041ffd5af SHA1: 450be1cf2f562c6e5efcdbc77f63a06a00a7d13d MD5sum: 475d82bca8e5760d4a04b0b9dcf3cd09 Description: data structures for "relational" or "labeled" data pandas is a Python package providing fast, flexible, and expressive data structures designed to make working with "relational" or "labeled" data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, real world data analysis in Python. pandas is well suited for many different kinds of data: . - Tabular data with heterogeneously-typed columns, as in an SQL table or Excel spreadsheet - Ordered and unordered (not necessarily fixed-frequency) time series data. - Arbitrary matrix data (homogeneously typed or heterogeneous) with row and column labels - Any other form of observational / statistical data sets. The data actually need not be labeled at all to be placed into a pandas data structure . This package contains the Python 2 version. Package: python-pandas-lib Source: pandas Version: 0.12.0-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 3998 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python (>= 2.7), python (<< 2.8) Provides: python2.7-pandas-lib Homepage: http://pandas.sourceforge.net Priority: optional Section: python Filename: pool/main/p/pandas/python-pandas-lib_0.12.0-1~nd13.04+1_i386.deb Size: 1373948 SHA256: caf91ef2def3cdce145c39e0578206784d4fad5cd94682c3e1535dae422b214e SHA1: cfdee689742ac79d200ae40991c2536f94dac990 MD5sum: f70079be22c90203702b20fac0278756 Description: low-level implementations and bindings for pandas This is an add-on package for python-pandas providing architecture-dependent extensions. . This package contains the Python 2 version. Python-Version: 2.7 Package: python-patsy Source: patsy Version: 0.2.1-2~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 542 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy Recommends: python-pandas Suggests: python-patsy-doc Homepage: http://github.com/pydata/patsy Priority: optional Section: python Filename: pool/main/p/patsy/python-patsy_0.2.1-2~nd13.04+1_all.deb Size: 141588 SHA256: 4a8f8281baa93259779245035bf908c2aae32c49ca12c18254b711e424f86db1 SHA1: 9183b4262d8853365f88bcb36efa3a536d2e03ce MD5sum: c4224925cc6e1d71fa5b69574ec751d2 Description: statistical models in Python using symbolic formulas patsy is a Python library for describing statistical models (especially linear models, or models that have a linear component) and building design matrices. . This package contains the Python 2 version. Package: python-patsy-doc Source: patsy Version: 0.2.1-2~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 827 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-underscore Suggests: python-patsy Homepage: http://github.com/pydata/patsy Priority: optional Section: doc Filename: pool/main/p/patsy/python-patsy-doc_0.2.1-2~nd13.04+1_all.deb Size: 271954 SHA256: eb3f3e7eefcf670563190265682b6c20ba7fee0bab2da9cf3f07438c99fdba8b SHA1: dc228a83b4e3ca0d0c31fa373d41a8cec4facde6 MD5sum: 6f963190f5954f63d7e18a061f04cd3c Description: documentation and examples for patsy This package contains documentation and example scripts for python-patsy. Package: python-pyepl Source: pyepl Version: 1.1.0+git12-g365f8e3-2~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1328 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-pyepl-common (= 1.1.0+git12-g365f8e3-2~nd13.04+1), python-numpy, python-imaging, python-pygame, python-pyode, python-opengl, ttf-dejavu, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libode1, libsamplerate0 (>= 0.1.7), libsndfile1 (>= 1.0.20), libstdc++6 (>= 4.4.0) Conflicts: python2.3-pyepl, python2.4-pyepl Replaces: python2.3-pyepl, python2.4-pyepl Provides: python2.7-pyepl Homepage: http://pyepl.sourceforge.net/ Priority: optional Section: python Filename: pool/main/p/pyepl/python-pyepl_1.1.0+git12-g365f8e3-2~nd13.04+1_i386.deb Size: 356226 SHA256: 7f89dd2b116c203d629afe8c4a0c718464eb11861e8cd03c439715102ba0a0df SHA1: 69e0f124f306e2f16995c45516c69913b05e6274 MD5sum: 6c22c6ec0bd5f57e54fdffa7fa278c20 Description: module for coding psychology experiments in Python PyEPL is a stimuli delivery and response registration toolkit to be used for generating psychology (as well as neuroscience, marketing research, and other) experiments. . It provides - presentation: both visual and auditory stimuli - responses registration: both manual (keyboard/joystick) and sound (microphone) time-stamped - sync-pulsing: synchronizing your behavioral task with external acquisition hardware - flexibility of encoding various experiments due to the use of Python as a description language - fast execution of critical points due to the calls to linked compiled libraries . This toolbox is here to be an alternative for a widely used commercial product E'(E-Prime) . This package provides PyEPL for supported versions of Python. Package: python-pyepl-common Source: pyepl Version: 1.1.0+git12-g365f8e3-2~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 813 Depends: neurodebian-popularity-contest, python Homepage: http://pyepl.sourceforge.net/ Priority: optional Section: python Filename: pool/main/p/pyepl/python-pyepl-common_1.1.0+git12-g365f8e3-2~nd13.04+1_all.deb Size: 818248 SHA256: db03e0e6da1604340b0e261b32b5fbfeb29c5ce61c377a0143c68970b8c84527 SHA1: 66261c89106edb13ad1415cfdc8f980ec0b0b383 MD5sum: 634c2710263e8349bd60a73fd742d18d Description: module for coding psychology experiments in Python PyEPL is a stimuli delivery and response registration toolkit to be used for generating psychology (as well as neuroscience, marketing research, and other) experiments. . It provides - presentation: both visual and auditory stimuli - responses registration: both manual (keyboard/joystick) and sound (microphone) time-stamped - sync-pulsing: synchronizing your behavioral task with external acquisition hardware - flexibility of encoding various experiments due to the use of Python as a description language - fast execution of critical points due to the calls to linked compiled libraries . This toolbox is here to be an alternative for a widely used commercial product E'(E-Prime) . This package provides common files such as images. Package: python-pynn Source: pynn Version: 0.7.5-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 763 Depends: neurodebian-popularity-contest, python (>= 2.5), python-support (>= 0.90.0) Recommends: python-jinja2, python-cheetah Suggests: python-neuron, python-brian, python-csa Homepage: http://neuralensemble.org/trac/PyNN Priority: extra Section: python Filename: pool/main/p/pynn/python-pynn_0.7.5-1~nd12.10+1+nd13.04+1_all.deb Size: 175824 SHA256: 8739a9484b7006b204e2cd7d530501ee969178ae5f0e291ef1d7243a6a5cfa6b SHA1: 6a89717511066991e428fc8e7efec413b51d4008 MD5sum: c6787a9174e58de883cd75f9682891f7 Description: simulator-independent specification of neuronal network models PyNN allows for coding a model once and run it without modification on any simulator that PyNN supports (currently NEURON, NEST, PCSIM and Brian). PyNN translates standard cell-model names and parameter names into simulator-specific names. Package: python-pyo Version: 0.6.6-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 9482 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), libc6 (>= 2.4), liblo7 (>= 0.26~repack), libportaudio2 (>= 19+svn20101113), libportmidi0, libsndfile1 (>= 1.0.20), python (<< 2.8) Recommends: python-tk, python-imaging-tk, python-wxgtk2.8 Homepage: http://code.google.com/p/pyo/ Priority: optional Section: python Filename: pool/main/p/python-pyo/python-pyo_0.6.6-1~nd13.04+1_i386.deb Size: 4807524 SHA256: f1b1f7e33cd76dada443bd67d31dea0844ddf8328d68ba1e073a0801a9c4950a SHA1: 4604c3b3fcc26d3c9603c5e06e7247f8369a9611 MD5sum: ba96359f40fc3e6bd867410712f85b09 Description: Python module written in C to help digital signal processing script creation pyo is a Python module containing classes for a wide variety of audio signal processing types. With pyo, user will be able to include signal processing chains directly in Python scripts or projects, and to manipulate them in real time through the interpreter. Tools in pyo module offer primitives, like mathematical operations on audio signal, basic signal processing (filters, delays, synthesis generators, etc.), but also complex algorithms to create sound granulation and others creative audio manipulations. . pyo supports OSC protocol (Open Sound Control), to ease communications between softwares, and MIDI protocol, for generating sound events and controlling process parameters. . pyo allows creation of sophisticated signal processing chains with all the benefits of a mature, and wildly used, general programming language. Package: python-pypsignifit Source: psignifit3 Version: 3.0~beta.20120611.1-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1488 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.6), python (<< 2.8), python (>= 2.7), python-support (>= 0.90.0), python-numpy, python-matplotlib, python-scipy Homepage: http://psignifit.sourceforge.net Priority: extra Section: python Filename: pool/main/p/psignifit3/python-pypsignifit_3.0~beta.20120611.1-1~nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 425390 SHA256: 2bd1cc8c3df764d58ade43d75766c9c5ad2500e0c28587b536430ac0bb7bb0e6 SHA1: 100b3a8457467b26b5e8b53ae975df21aee96fe3 MD5sum: 15b622ac6a5533ba793064bde47f8dfb Description: psychometric analysis of psychophysics data in Python Psignifit allows fitting of psychometric functions to datasets while maintaining full control over a large number of parameters. Psignifit performs the calculation of confidence intervals as well as goodness-of-fit tests. In addition it offers: . * full Bayesian treatment of psychometric functions including Bayesian model selection and goodness of fit assessment * identification of influential observations and outlier detection * flexible shape definition of the psychometric function . This package provides the Python bindings. Package: python-pyxnat Source: pyxnat Version: 0.9.1+git39-g96bf069-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 862 Depends: neurodebian-popularity-contest, python-lxml, python-simplejson, python-httplib2 (>= 0.7.0) Recommends: python-networkx, python-matplotlib Homepage: http://packages.python.org/pyxnat/ Priority: extra Section: python Filename: pool/main/p/pyxnat/python-pyxnat_0.9.1+git39-g96bf069-1~nd12.10+1+nd13.04+1_all.deb Size: 190396 SHA256: a742f5f47842ee38e7491416ea0de9e721716c69c4cf32cae51ad2367a8d89c2 SHA1: c687df5e68cc79fba85924061a7f8e3d9732903e MD5sum: 4e5a040be6b4430eab9ed7922df103ee Description: Interface to access neuroimaging data on XNAT servers pyxnat is a simple Python library that relies on the REST API provided by the XNAT platform since its 1.4 version. XNAT is an extensible database for neuroimaging data. The main objective is to ease communications with an XNAT server to plug-in external tools or Python scripts to process the data. It features: . - resources browsing capabilities - read and write access to resources - complex searches - disk-caching of requested files and resources Package: python-scikits-learn Source: scikit-learn Version: 0.14.1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 35 Depends: neurodebian-popularity-contest, python-sklearn Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: oldlibs Filename: pool/main/s/scikit-learn/python-scikits-learn_0.14.1-1~nd13.04+1_all.deb Size: 33350 SHA256: 3b26ce343682816c9d20ab5a0ec2951c46ce233a3874719adcd28d08ff32db49 SHA1: dc45e381d04f62a84296a6173bc4a434a6e001fd MD5sum: ff188f7c78cc6f31413834f373b03bad Description: transitional compatibility package for scikits.learn -> sklearn migration Provides old namespace (scikits.learn) and could be removed if dependent code migrated to use sklearn for clarity of the namespace. Package: python-scikits.statsmodels Source: statsmodels Version: 0.5.0-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9 Depends: neurodebian-popularity-contest, python-statsmodels Homepage: http://statsmodels.sourceforge.net/ Priority: extra Section: oldlibs Filename: pool/main/s/statsmodels/python-scikits.statsmodels_0.5.0-1~nd13.04+1_all.deb Size: 5636 SHA256: edd8cc37a13fde303ab919fcf0382e1537107b555ee4063bb0fdf252aefb265f SHA1: 47674665c8a46c2db0e7fec5f3788e0508a769ea MD5sum: 5c856d0a92039b7a0d29eb5a2a90a834 Description: transitional compatibility package for statsmodels migration Provides old namespace (scikits.statsmodels) and could be removed if dependent code migrated to use statsmodels for clarity of the namespace. Package: python-skimage Source: skimage Version: 0.8.2-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4550 Depends: neurodebian-popularity-contest, python (>= 2.6), python-numpy, python-support (>= 0.90.0), python2.7, python-scipy (>= 0.10), python-skimage-lib (>= 0.8.2-1~nd13.04+1), libfreeimage3 Recommends: python-nose, python-matplotlib (>= 1.0), python-imaging, python-qt4 Suggests: python-skimage-doc, python-opencv Provides: python2.7-skimage Homepage: http://scikits-image.org Priority: optional Section: python Filename: pool/main/s/skimage/python-skimage_0.8.2-1~nd13.04+1_all.deb Size: 3236962 SHA256: 9bba8581a76821b750842065aeaadefd18cf87444f083026aad7b71d4c208fea SHA1: 4561189865362a95d0747d0ed70c480f4f30b9a2 MD5sum: 37e1f116232577ff2ddcbb39457d7759 Description: Python modules for image processing scikits-image is a collection of image processing algorithms for Python. It performs tasks such as image loading, filtering, morphology, segmentation, color conversions, and transformations. Package: python-skimage-doc Source: skimage Version: 0.8.2-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 14178 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-skimage Homepage: http://scikits-image.org Priority: optional Section: doc Filename: pool/main/s/skimage/python-skimage-doc_0.8.2-1~nd13.04+1_all.deb Size: 11797626 SHA256: 62e1fb720acfcbfe453c0b474f00295bff75e43d2e858edd4b1bf4daf4929509 SHA1: 6e76af47937ce84a4ceb778ae9328d180bc2a9f0 MD5sum: 11ba074b0d482f12c6aa877aa0908323 Description: Documentation and examples for scikits-image This package contains documentation and example scripts for python-skimage. Package: python-skimage-lib Source: skimage Version: 0.8.2-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2391 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), python (<< 2.8), python (>= 2.7), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python-support (>= 0.90.0) Recommends: python-skimage Provides: python2.7-skimage-lib Homepage: http://scikits-image.org Priority: optional Section: python Filename: pool/main/s/skimage/python-skimage-lib_0.8.2-1~nd13.04+1_i386.deb Size: 875774 SHA256: 6c3dd6fd99c3363161a7e081e12599437dff9f9f34e9fe3b3ffaeecdcac9c89c SHA1: cdc3bb8a31b80288bd1efcf1fc81d1480072d977 MD5sum: 8bc046283cb6886046b2c6417d691113 Description: Optimized low-level algorithms for scikits-image This is an add-on package for python-skimage. It provides optimized, low-level implementations of algorithms. Python-Version: 2.7 Package: python-sklearn Source: scikit-learn Version: 0.14.1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3549 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy, python-scipy, python-sklearn-lib (>= 0.14.1-1~nd13.04+1), python-joblib (>= 0.4.5) Recommends: python-nose, python-matplotlib Suggests: python-dap, python-scikits-optimization, python-sklearn-doc, ipython Enhances: python-mdp, python-mvpa2 Breaks: python-scikits-learn (<< 0.9~) Replaces: python-scikits-learn (<< 0.9~) Provides: python2.7-sklearn Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python-sklearn_0.14.1-1~nd13.04+1_all.deb Size: 1103558 SHA256: 75ce8de7cb4410c4e7f27119a369af11a2db1bd3501ae92fcd62cb7ebc55eb62 SHA1: 921fd43cc36b78d3894d05c4f18fea9cebbdc974 MD5sum: 32cca45f7d6720d58c8c74e0e106b14a Description: Python modules for machine learning and data mining scikit-learn is a collection of Python modules relevant to machine/statistical learning and data mining. Non-exhaustive list of included functionality: - Gaussian Mixture Models - Manifold learning - kNN - SVM (via LIBSVM) Package: python-sklearn-doc Source: scikit-learn Version: 0.14.1-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 579 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-sklearn Conflicts: python-scikits-learn-doc Replaces: python-scikits-learn-doc Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: doc Filename: pool/main/s/scikit-learn/python-sklearn-doc_0.14.1-1~nd13.04+1_all.deb Size: 190030 SHA256: 9cc5098d90f84e0c2b60d6e4edda4253068e584e95289c621c637c879f8186c4 SHA1: 3e2ec356df17a5cf548f3c6d01ff1d43a3efcff3 MD5sum: 3448a9c8ad7df5f8045002acd3af159c Description: documentation and examples for scikit-learn This package contains documentation and example scripts for python-sklearn. Package: python-sklearn-lib Source: scikit-learn Version: 0.14.1-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 3575 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python (>= 2.7), python (<< 2.8) Conflicts: python-scikits-learn-lib Replaces: python-scikits-learn-lib Provides: python2.7-sklearn-lib Homepage: http://scikit-learn.sourceforge.net Priority: optional Section: python Filename: pool/main/s/scikit-learn/python-sklearn-lib_0.14.1-1~nd13.04+1_i386.deb Size: 1415198 SHA256: 26afbf99cf165b0792f1ea433c3ada50df19fef96b8dcecb50b7cfd8293061dc SHA1: 82a36ddf07519dcd941390c96a5a4fd3623543c8 MD5sum: f5555f14b8d9f60948c78eb3beaef99e Description: low-level implementations and bindings for scikit-learn This is an add-on package for python-sklearn. It provides low-level implementations and custom Python bindings for the LIBSVM library. Package: python-spykeutils Source: spykeutils Version: 0.4.0-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2016 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-scipy, python-quantities, python-neo (>= 0.2.1), python-nose, python-sphinx Recommends: python-guidata, python-guiqwt, python-tables, libjs-jquery, libjs-underscore, python-sklearn (>= 0.11), python-joblib (>= 0.4.5) Provides: python2.7-spykeutils Homepage: https://github.com/rproepp/spykeutils Priority: extra Section: python Filename: pool/main/s/spykeutils/python-spykeutils_0.4.0-1~nd13.04+1_all.deb Size: 401166 SHA256: 9a58151d07d7520751a5987409452c390c55f136df28a561ebc5b0b8d9fcd6dc SHA1: 4ef30762d5bb5e78564fc80c848481004ce4c670 MD5sum: a77fecedcbd770e252642a842f578d8b Description: utilities for analyzing electrophysiological data spykeutils is a Python library for analyzing and plotting data from neurophysiological recordings. It can be used by itself or in conjunction with Spyke Viewer, a multi-platform GUI application for navigating electrophysiological datasets. Package: python-statsmodels Source: statsmodels Version: 0.5.0-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 20432 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-numpy, python-scipy, python-statsmodels-lib (>= 0.5.0-1~nd13.04+1), python-patsy Recommends: python-pandas, python-matplotlib, python-nose, python-joblib Conflicts: python-scikits-statsmodels, python-scikits.statsmodels (<< 0.4) Replaces: python-scikits-statsmodels, python-scikits.statsmodels (<< 0.4) Provides: python2.7-statsmodels Homepage: http://statsmodels.sourceforge.net/ Priority: extra Section: python Filename: pool/main/s/statsmodels/python-statsmodels_0.5.0-1~nd13.04+1_all.deb Size: 4682438 SHA256: 2a21d2b08addd50290ec03381e2ee92c1e7be25e9a5ef0abd907c4416442f933 SHA1: c98e31786fde183d1d5ab82dccd28a1547f61941 MD5sum: bbfda8bb9802b1ab252f1414f429f82a Description: Python module for the estimation of statistical models statsmodels Python module provides classes and functions for the estimation of several categories of statistical models. These currently include linear regression models, OLS, GLS, WLS and GLS with AR(p) errors, generalized linear models for six distribution families and M-estimators for robust linear models. An extensive list of result statistics are available for each estimation problem. Package: python-statsmodels-doc Source: statsmodels Version: 0.5.0-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 32549 Depends: neurodebian-popularity-contest, libjs-jquery Suggests: python-statsmodels Conflicts: python-scikits-statsmodels-doc, python-scikits.statsmodels-doc Replaces: python-scikits-statsmodels-doc, python-scikits.statsmodels-doc Homepage: http://statsmodels.sourceforge.net/ Priority: extra Section: doc Filename: pool/main/s/statsmodels/python-statsmodels-doc_0.5.0-1~nd13.04+1_all.deb Size: 9253286 SHA256: 6fe726032db301674769285750d43dabeadc30ff9771efcc14e2095f0f911177 SHA1: be795b20ee9adfe7fcb982602430c5d89c70e8b7 MD5sum: 2d2d70302b9c703bc34ff802b3d9830b Description: documentation and examples for statsmodels This package contains HTML documentation and example scripts for python-statsmodels. Package: python-statsmodels-lib Source: statsmodels Version: 0.5.0-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 304 Depends: neurodebian-popularity-contest, python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python (>= 2.7), python (<< 2.8), libc6 (>= 2.4) Conflicts: python-scikits-statsmodels, python-scikits.statsmodels (<< 0.4) Replaces: python-scikits-statsmodels, python-scikits.statsmodels (<< 0.4) Homepage: http://statsmodels.sourceforge.net/ Priority: extra Section: python Filename: pool/main/s/statsmodels/python-statsmodels-lib_0.5.0-1~nd13.04+1_i386.deb Size: 91578 SHA256: b3d915773f6d0799e61e5e4a4171c79fb4209d04a3b18356c90d373db0f1d573 SHA1: 85d809a856c478997446a175b21803c8ccb2fd24 MD5sum: ce07a5cb349c61af2a1b39c252420678 Description: low-level implementations and bindings for statsmodels This package contains architecture dependent extensions for python-statsmodels. Package: python-stfio Source: stimfit Version: 0.13.2-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 763 Depends: neurodebian-popularity-contest, python (<< 2.8), python (>= 2.7.1-0ubuntu2), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, libbiosig1, libc6 (>= 2.4), libcholmod1.7.1 (>= 1:3.4.0), libgcc1 (>= 1:4.1.1), libhdf5-7, libpython2.7 (>= 2.7), libstdc++6 (>= 4.2.1) Recommends: python-matplotlib, python-scipy Provides: python2.7-stfio Homepage: http://www.stimfit.org Priority: optional Section: python Filename: pool/main/s/stimfit/python-stfio_0.13.2-1~nd13.04+1_i386.deb Size: 275994 SHA256: 1ad9d1d4d265a71cef93e88cefeae1104c572a3cc5db13d9d633b0227a77125f SHA1: fbf07aad2a4b95bc5259376d0a28903393258038 MD5sum: 67f7d3a6ad5137947ce0e27ffe430f53 Description: Python module to read common electrophysiology file formats. The stfio module allows you to read common electrophysiology file formats from Python. Axon binaries (abf), Axon text (atf), HEKA (dat), CFS (dat/cfs), Axograph (axgd/axgx) are currently supported. Package: python-surfer Source: pysurfer Version: 0.3+git15-gae6cbb1-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 93 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-numpy, python-scipy, python-nibabel, python-imaging, mayavi2, python-argparse, ipython Recommends: mencoder Homepage: http://pysurfer.github.com Priority: extra Section: python Filename: pool/main/p/pysurfer/python-surfer_0.3+git15-gae6cbb1-1~nd12.04+1+nd12.10+1+nd13.04+1_all.deb Size: 28126 SHA256: d027822bf6edf7f8e4a4726abfa4bff05a553010e617229cf66c9ebc39f260ae SHA1: ae3d0fa877af7818bb783d737f8a8df882765042 MD5sum: db1308bda1624dc4cacc037c4519bbc7 Description: visualize Freesurfer's data in Python This is a Python package for visualization and interaction with cortical surface representations of neuroimaging data from Freesurfer. It extends Mayavi’s powerful visualization engine with a high-level interface for working with MRI and MEG data. . PySurfer offers both a command-line interface designed to broadly replicate Freesurfer’s Tksurfer program as well as a Python library for writing scripts to efficiently explore complex datasets. Python-Version: 2.7 Package: python-traits4 Source: python-traits Version: 4.0.0-1~cbp1~nd11.04+1+nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Bugs: mailto:bugs@neuro.debian.net Maintainer: NeuroDebian Team Installed-Size: 1662 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), python (<< 2.8), python (>= 2.7), python-support (>= 0.90.0) Suggests: python-traitsui Conflicts: python-traits (>= 4.0~) Homepage: http://pypi.python.org/pypi/traits Priority: optional Section: python Filename: pool/main/p/python-traits/python-traits4_4.0.0-1~cbp1~nd11.04+1+nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 338370 SHA256: c65bcafa75da76cf07ad3f82c619d45c6587a4e9232133ac99aa483dc7cf98f1 SHA1: b2ee7268590847385f596c7f3e780f903e0d57eb MD5sum: da1b4ba4998e09f36f3e5d7a86af2629 Description: Manifest typing and reactive programming for Python The traits package provides a metaclass with special attributes that are called traits. A trait is a type definition that can be used for normal Python object attributes, giving the attributes some additional characteristics: * Initialization: A trait attribute can have a default value * Validation: A trait attribute is manifestly typed. * Delegation: The value of a trait attribute can be contained in another object * Notification: Setting the value of a trait attribute can fired callbacks * Visualization: With the TraitsUI package, GUIs can be generated automatically from traited objects. Uploaders: Yaroslav Halchenko , Michael Hanke Vcs-Browser: http://git.debian.org/?p=pkg-exppsy/python-traits4.git Vcs-Git: git://git.debian.org/git/pkg-exppsy/python-traits4.git Package: python-visionegg Source: visionegg Version: 1.2.1-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1726 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgl1-mesa-glx, python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python (>= 2.7.1-0ubuntu2), python (<< 2.8) Homepage: http://www.visionegg.org Priority: optional Section: python Filename: pool/main/v/visionegg/python-visionegg_1.2.1-1~nd13.04+1_i386.deb Size: 665440 SHA256: 79b33672568837eb36447ee03067eb67bddc1afc061f61ee0e53addb966acc4b SHA1: 353d1d6d2ad25ef3caedd3a009d42a2fd4d5e89d MD5sum: 2ff6bfb840fc9f1efb9b6fb7ea1f371f Description: Python library for 2D/3D visual stimulus generation The Vision Egg is a programming library that uses standard, inexpensive computer graphics cards to produce visual stimuli for vision research experiments. Package: python3-mdp Source: mdp Version: 3.3+git6-g7bbd889-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1457 Depends: neurodebian-popularity-contest, python3 (>= 3.2.3-3~), python3-numpy Homepage: http://mdp-toolkit.sourceforge.net/ Priority: optional Section: python Filename: pool/main/m/mdp/python3-mdp_3.3+git6-g7bbd889-1~nd12.10+1+nd13.04+1_all.deb Size: 472534 SHA256: d3239c36162185a4ef03148ce61949c6f7a9e74670d56c88722e4200721b57dc SHA1: 2562033ca9918601e8f0cd28eff8146a5a610d52 MD5sum: 735efdc181c99b658b0e9276ea66e384 Description: Modular toolkit for Data Processing Python data processing framework for building complex data processing software by combining widely used machine learning algorithms into pipelines and networks. Implemented algorithms include: Principal Component Analysis (PCA), Independent Component Analysis (ICA), Slow Feature Analysis (SFA), Independent Slow Feature Analysis (ISFA), Growing Neural Gas (GNG), Factor Analysis, Fisher Discriminant Analysis (FDA), and Gaussian Classifiers. . This package contains MDP for Python 3. Package: python3-pandas Source: pandas Version: 0.12.0-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 5575 Depends: neurodebian-popularity-contest, python3 (>= 3.2.3-3~), python3-dateutil, python3-tz, python3-numpy (>= 1:1.6~), python3-pandas-lib (>= 0.12.0-1~nd13.04+1) Recommends: python3-scipy, python3-matplotlib, python3-numexpr, python3-tables, python3-bs4, python3-html5lib, python3-six Suggests: python-pandas-doc Homepage: http://pandas.sourceforge.net Priority: optional Section: python Filename: pool/main/p/pandas/python3-pandas_0.12.0-1~nd13.04+1_all.deb Size: 1076246 SHA256: 1f14eab4938fd82601593dc00d432c489301e1cfba5b01a35f66b02379e4006f SHA1: 6120171eefac9d40f9482cbe83b40381b049d572 MD5sum: b419a7301d33c26d548235a00fccbec7 Description: data structures for "relational" or "labeled" data - Python 3 pandas is a Python package providing fast, flexible, and expressive data structures designed to make working with "relational" or "labeled" data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, real world data analysis in Python. pandas is well suited for many different kinds of data: . - Tabular data with heterogeneously-typed columns, as in an SQL table or Excel spreadsheet - Ordered and unordered (not necessarily fixed-frequency) time series data. - Arbitrary matrix data (homogeneously typed or heterogeneous) with row and column labels - Any other form of observational / statistical data sets. The data actually need not be labeled at all to be placed into a pandas data structure . This package contains the Python 3 version. Package: python3-pandas-lib Source: pandas Version: 0.12.0-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 3917 Depends: neurodebian-popularity-contest, libc6 (>= 2.7), python3-numpy (>= 1:1.7-0~b1), python3-numpy-abi9, python3 (>= 3.3), python3 (<< 3.4) Homepage: http://pandas.sourceforge.net Priority: optional Section: python Filename: pool/main/p/pandas/python3-pandas-lib_0.12.0-1~nd13.04+1_i386.deb Size: 1340762 SHA256: bf0e9f96df7fe81039d2a45c0bc6be005ca3c502ce758fbe1805eae6cd551da5 SHA1: 887423a435870d8836e51bf45efe1c99743b16c7 MD5sum: e464d142a486bed7e200e850666f8a5d Description: low-level implementations and bindings for pandas - Python 3 This is an add-on package for python-pandas providing architecture-dependent extensions. . This package contains the Python 3 version. Package: python3-patsy Source: patsy Version: 0.2.1-2~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 537 Depends: neurodebian-popularity-contest, python3 (>= 3.2.3-3~), python3-numpy Recommends: python3-pandas Suggests: python-patsy-doc Homepage: http://github.com/pydata/patsy Priority: optional Section: python Filename: pool/main/p/patsy/python3-patsy_0.2.1-2~nd13.04+1_all.deb Size: 140894 SHA256: eb5bfa48cc76fca948b402aef445a9d3a0cdcf2d9f98614cac0c92055ba95fdc SHA1: 0f8d0299ae15ca0caf4b46f1f967eedeaa8c0794 MD5sum: 4cb4170c8a7aaa09a0e878833ec7576b Description: statistical models in Python using symbolic formulas patsy is a Python library for describing statistical models (especially linear models, or models that have a linear component) and building design matrices. . This package contains the Python 3 version. Package: qnifti2dicom Source: nifti2dicom Version: 0.4.6-2~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 3106 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgdcm2.2, libinsighttoolkit4.3, libqtcore4 (>= 4:4.7.0~beta1), libqtgui4 (>= 4:4.5.3), libstdc++6 (>= 4.6), libvtk5.8, libvtk5.8-qt4, nifti2dicom (= 0.4.6-2~nd13.04+1), nifti2dicom-data (= 0.4.6-2~nd13.04+1) Homepage: https://github.com/biolab-unige/nifti2dicom Priority: optional Section: science Filename: pool/main/n/nifti2dicom/qnifti2dicom_0.4.6-2~nd13.04+1_i386.deb Size: 678528 SHA256: 85562e73a464dc7f8c765dbb28fae7ef9a6cd3f1a2547210956b12bfef221c98 SHA1: 4caf5d293aaad39af8a7b1d1c9492324a00a7b62 MD5sum: ef7d9499dcfd0ef60c05535ac29a17a8 Description: convert 3D medical images to DICOM 2D series (gui) Nifti2Dicom is a convertion tool that converts 3D NIfTI files (and other formats supported by ITK, including Analyze, MetaImage Nrrd and VTK) to DICOM. Unlike other conversion tools, it can import a DICOM file that is used to import the patient and study DICOM tags, and allows you to edit the accession number and other DICOM tags, in order to create a valid DICOM that can be imported in a PACS. . This package contains the Qt4 GUI. Package: spm8-common Source: spm8 Version: 8.5236~dfsg.1-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18499 Depends: neurodebian-popularity-contest Recommends: spm8-data, spm8-doc Priority: extra Section: science Filename: pool/main/s/spm8/spm8-common_8.5236~dfsg.1-1~nd12.10+1+nd13.04+1_all.deb Size: 10744012 SHA256: 8cbaf2ef8a3621e1a45f8046a5a4b3f5018599cd5fd061dbdab3f6f636db55dc SHA1: 358a47eca3c2a8e45383012ebb1db5ed7e315d4f MD5sum: 2ea4c1626f3ecc1a0f8b72afe93d7325 Description: analysis of brain imaging data sequences Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the platform-independent M-files. Package: spm8-data Source: spm8 Version: 8.5236~dfsg.1-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 72987 Depends: neurodebian-popularity-contest Priority: extra Section: science Filename: pool/main/s/spm8/spm8-data_8.5236~dfsg.1-1~nd12.10+1+nd13.04+1_all.deb Size: 52166644 SHA256: adf5ccd28c33d360fddc672827cc45f128dd95d107e6fc80ec7b5f01013199b8 SHA1: 555fd27c1066c8cdc3f9d5ca88e1a5604af0f318 MD5sum: 007b37221423d90e041d57b47f112413 Description: data files for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provide the data files shipped with the SPM distribution, such as various stereotaxic brain space templates and EEG channel setups. Package: spm8-doc Source: spm8 Version: 8.5236~dfsg.1-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 9242 Depends: neurodebian-popularity-contest Priority: extra Section: doc Filename: pool/main/s/spm8/spm8-doc_8.5236~dfsg.1-1~nd12.10+1+nd13.04+1_all.deb Size: 8990888 SHA256: 26ace888d49d3abb1c4525fff11e3538aaf54bdeb7bd0f37720b5a32c211055d SHA1: 3e7bd77be9b08a8227586a6138fba786fa7a5365 MD5sum: 823a54d07acd71360de860ff3f62e019 Description: manual for SPM8 Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides the SPM manual in PDF format. Package: spykeviewer Version: 0.4.0-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1120 Depends: neurodebian-popularity-contest, python (>= 2.7.1-0ubuntu2), python (<< 2.8), python-guidata, python-guiqwt (>= 2.1.4), python-spyderlib, python-spykeutils (>= 0.4.0), python-neo (>= 0.2.1), python-matplotlib, python-scipy, python-nose, python-sphinx, python-tables Recommends: libjs-jquery, libjs-underscore, ipython-qtconsole (>= 0.12) Homepage: http://www.ni.tu-berlin.de/software/spykeviewer Priority: extra Section: python Filename: pool/main/s/spykeviewer/spykeviewer_0.4.0-1~nd13.04+1_all.deb Size: 575216 SHA256: 3496132ea750ffae4ab317e24742bcbc95f7825a42a790c78c809e2aaaf6147b SHA1: 3b3616fd487bf3dba0f2e6b0674203538071d561 MD5sum: 721e9dc215c3810ced07cb174fb3115c Description: graphical utility for analyzing electrophysiological data Spyke Viewer is a multi-platform GUI application for navigating, analyzing and visualizing electrophysiological datasets. Based on the Neo framework, it works with a wide variety of data formats. Spyke Viewer includes an integrated Python console and a plugin system for custom analyses and plots. Package: stabilitycalc Version: 0.1-1~nd11.04+1+nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 119 Depends: neurodebian-popularity-contest, python, python-support (>= 0.90.0), python-numpy, python-matplotlib, python-scipy, python-nifti Recommends: python-dicom Homepage: https://github.com/bbfrederick/stabilitycalc Priority: extra Section: science Filename: pool/main/s/stabilitycalc/stabilitycalc_0.1-1~nd11.04+1+nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1_all.deb Size: 28806 SHA256: f4d0a92bd82ccf13995bd023e60482c9bb6e5bcc276aacf8d6d71f47c726ac91 SHA1: 5d37dfd09ba13dca96797dc779dfd58616624062 MD5sum: 64c06762e13f6bd6a33f11383612ccc0 Description: evaluate fMRI scanner stability Command-line tools to calculate numerous fMRI scanner stability metrics, based on the FBIRN quality assurance test protocal. Any 4D volumetric timeseries image in NIfTI format is support input. Output is a rich HTML report. Python-Version: 2.7 Package: stimfit Version: 0.13.2-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 2345 Depends: neurodebian-popularity-contest, libbiosig1, libblas3 | libblas.so.3 | libatlas3-base, libc6 (>= 2.4), libcholmod1.7.1 (>= 1:3.4.0), libfftw3-double3, libgcc1 (>= 1:4.1.1), libhdf5-7, liblapack3 | liblapack.so.3 | libatlas3-base, libpython2.7 (>= 2.7), libstdc++6 (>= 4.2.1), libwxbase2.8-0 (>= 2.8.12.1), libwxgtk2.8-0 (>= 2.8.12.1), python (>= 2.7.1-0ubuntu2), python-numpy (>= 1:1.7-0~b1), python-numpy-abi9, python2.7, python-wxgtk2.8 (>= 2.8.9), python-matplotlib Recommends: python-scipy Homepage: http://www.stimfit.org Priority: optional Section: science Filename: pool/main/s/stimfit/stimfit_0.13.2-1~nd13.04+1_i386.deb Size: 844000 SHA256: 71e52debe2d600a4fb7b66d2a0351c6e95dff2b223c542fc38f9bb47767bee48 SHA1: f1ac226e2665ee0cbd29fc0d8ca043041454f073 MD5sum: 49557272823b9d2f06db847753dc5f80 Description: Program for viewing and analyzing electrophysiological data Stimfit is a free, fast and simple program for viewing and analyzing electrophysiological data. It features an embedded Python shell that allows you to extend the program functionality by using numerical libraries such as NumPy and SciPy. Package: stimfit-dbg Source: stimfit Version: 0.13.2-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 10751 Depends: neurodebian-popularity-contest, stimfit Recommends: python-matplotlib, python-scipy, python-stfio Homepage: http://www.stimfit.org Priority: extra Section: debug Filename: pool/main/s/stimfit/stimfit-dbg_0.13.2-1~nd13.04+1_i386.deb Size: 4087054 SHA256: 36df7a9196d4ce08d3d022e4b69059c5df1ce7091456e44f15d3ee093f78a059 SHA1: 400e392044fc83c4f031a0d925f10440568f26f4 MD5sum: b03d5fceb9b31f30442eead4b15f24b1 Description: Debug symbols for stimfit Stimfit is a free, fast and simple program for viewing and analyzing electrophysiological data. It features an embedded Python shell that allows you to extend the program functionality by using numerical libraries such as NumPy and SciPy. Package: testkraut Version: 0.0.1-1~nd12.10+1+nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 359 Depends: neurodebian-popularity-contest, python (>= 2.6), python-support (>= 0.90.0), python-numpy, libjs-underscore, libjs-jquery, python-argparse Recommends: strace, python-scipy, python-colorama, python-apt Homepage: https://github.com/neurodebian/testkraut Priority: extra Section: python Filename: pool/main/t/testkraut/testkraut_0.0.1-1~nd12.10+1+nd13.04+1_all.deb Size: 99674 SHA256: 4bb183a82062eea15a25438731463d7d3a57ac1fd8bbe3f38101b6c3c08c6db2 SHA1: 045ce201ed946332c8971bc0b8f92774aa49e90b MD5sum: 7b33e1503852f85c3d82cd5c0d1c0e54 Description: test and evaluate heterogeneous data processing pipelines This is a framework for software testing. That being said, testkraut tries to minimize the overlap with the scopes of unit testing, regression testing, and continuous integration testing. Instead, it aims to complement these kinds of testing, and is able to re-use them, or can be integrated with them. . In a nutshell testkraut helps to facilitate statistical analysis of test results. In particular, it focuses on two main scenarios: . * Comparing results of a single (test) implementation across different or changing computational environments (think: different operating systems, different hardware, or the same machine before an after a software upgrade). * Comparing results of different (test) implementations generating similar output from identical input (think: performance of various signal detection algorithms). . While such things can be done using other available tools as well, testkraut aims to provide a lightweight, yet comprehensive description of a test run. Such a description allows for decoupling test result generation and analysis – opening up the opportunity to “crowd-source” software testing efforts, and aggregate results beyond the scope of a single project, lab, company, or site. Python-Version: 2.7 Package: vowpal-wabbit Version: 7.3-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 41 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.4.0), libvw0 (= 7.3-1~nd13.04+1) Suggests: vowpal-wabbit-doc Homepage: http://hunch.net/~vw/ Priority: optional Section: science Filename: pool/main/v/vowpal-wabbit/vowpal-wabbit_7.3-1~nd13.04+1_i386.deb Size: 20502 SHA256: 35319d6ea28bd344f2f4addfba47f0dbd8841a065b523dd0d968f8ec60af96f8 SHA1: ed933ac6adfe712b64d5e00be1cfd515dd2426e3 MD5sum: 127977d29df55ff99131ff1960bae19b Description: fast and scalable online machine learning algorithm Vowpal Wabbit is a fast online machine learning algorithm. The core algorithm is specialist gradient descent (GD) on a loss function (several are available). VW features: - flexible input data specification - speedy learning - scalability (bounded memory footprint, suitable for distributed computation) - feature pairing Package: vowpal-wabbit-dbg Source: vowpal-wabbit Version: 7.3-1~nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 5608 Depends: neurodebian-popularity-contest, vowpal-wabbit (= 7.3-1~nd13.04+1) Homepage: http://hunch.net/~vw/ Priority: extra Section: debug Filename: pool/main/v/vowpal-wabbit/vowpal-wabbit-dbg_7.3-1~nd13.04+1_i386.deb Size: 2167174 SHA256: 94d948a923fe144fdba1b1bed5e567f8e3854d87865e0cfc0b82ba6cb2d39ab2 SHA1: 546b18999ea73f6dc1029711fb39f90374ee6cd2 MD5sum: fa2653ab7d32ad6c68a876344cbcc2ce Description: fast and scalable online machine learning algorithm - debug files Vowpal Wabbit is a fast online machine learning algorithm. The core algorithm is specialist gradient descent (GD) on a loss function (several are available). VW features: - flexible input data specification - speedy learning - scalability (bounded memory footprint, suitable for distributed computation) - feature pairing . This package contains debug symbols for the binaries shipped by vowpal-wabbit packages. Package: vowpal-wabbit-doc Source: vowpal-wabbit Version: 7.3-1~nd13.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 70918 Depends: neurodebian-popularity-contest Recommends: vowpal-wabbit Homepage: http://hunch.net/~vw/ Priority: optional Section: doc Filename: pool/main/v/vowpal-wabbit/vowpal-wabbit-doc_7.3-1~nd13.04+1_all.deb Size: 50202370 SHA256: 9dddf9b5b7a2237d4f2a93efd545d867f3d204f1d05ab4d462bf15ea4b55e986 SHA1: 8e49788bf4e88ece7e82ef40224840f79f2eee52 MD5sum: 55654e0768d8a01e3e339294bbb06565 Description: fast and scalable online machine learning algorithm - documentation Vowpal Wabbit is a fast online machine learning algorithm. The core algorithm is specialist gradient descent (GD) on a loss function (several are available). VW features: - flexible input data specification - speedy learning - scalability (bounded memory footprint, suitable for distributed computation) - feature pairing . This package contains examples (tests) for vowpal-wabbit. Package: vrpn Version: 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 284 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), libvrpn0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1), libvrpnserver0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1) Homepage: http://www.cs.unc.edu/Research/vrpn/ Priority: extra Section: utils Filename: pool/main/v/vrpn/vrpn_07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 64378 SHA256: 11584fd469c60b38d7722fb52e4224dcd11b9f87b9baced4969e2eedb73064cd SHA1: 895242ad867135ee02f52140ac3783e118fb4ba9 MD5sum: 23e840b1017aece1283396ee89026933 Description: Virtual Reality Peripheral Network (executables) The Virtual-Reality Peripheral Network (VRPN) is a set of classes within a library and a set of servers that are designed to implement a network-transparent interface between application programs and the set of physical devices (tracker, etc.) used in a virtual-reality (VR) system. The idea is to have a PC or other host at each VR station that controls the peripherals (tracker, button device, haptic device, analog inputs, sound, etc). VRPN provides connections between the application and all of the devices using the appropriate class-of-service for each type of device sharing this link. The application remains unaware of the network topology. Note that it is possible to use VRPN with devices that are directly connected to the machine that the application is running on, either using separate control programs or running all as a single program. . This package contains the executables like the VRPN server. Package: vrpn-dbg Source: vrpn Version: 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 4162 Depends: neurodebian-popularity-contest, libvrpn0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1), libvrpnserver0 (= 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1), vrpn (= 07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1) Homepage: http://www.cs.unc.edu/Research/vrpn/ Priority: extra Section: debug Filename: pool/main/v/vrpn/vrpn-dbg_07.30+dfsg-1~nd12.04+1+nd12.10+1+nd13.04+1_i386.deb Size: 1592158 SHA256: c8966dd758e36af76a5820259c7e138488d7aa67cfac882f1c133eb5d78b56f0 SHA1: 49c835f7a4162ee9dda93a87cb15aee9025a8f69 MD5sum: 2ad28e221c53bfa49d1f9b936298d15e Description: Virtual Reality Peripheral Network (debugging symbols) The Virtual-Reality Peripheral Network (VRPN) is a set of classes within a library and a set of servers that are designed to implement a network-transparent interface between application programs and the set of physical devices (tracker, etc.) used in a virtual-reality (VR) system. The idea is to have a PC or other host at each VR station that controls the peripherals (tracker, button device, haptic device, analog inputs, sound, etc). VRPN provides connections between the application and all of the devices using the appropriate class-of-service for each type of device sharing this link. The application remains unaware of the network topology. Note that it is possible to use VRPN with devices that are directly connected to the machine that the application is running on, either using separate control programs or running all as a single program. . This package contains the debugging symbols of the libraries and executables.