Package: fsl Version: 4.1.5.2-3~hardy.nd1 Architecture: i386 Maintainer: NeuroDebian Team Installed-Size: 28508 Depends: bc, dc, fslview, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1-21), libgd2-noxpm (>= 2.0.35.dfsg) | libgd2-xpm (>= 2.0.35.dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libnewmat10ldbl, libnifti1 (>> 1.1.0-2), libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.2.1-4), mozilla-firefox | www-browser, tcl8.4 (>= 8.4.7), tcsh | c-shell, tk8.4 (>= 8.4.7), zlib1g (>= 1:1.2.3.3.dfsg-1) Recommends: fsl-atlases, fsl-doc (= 4.1.5.2-3~hardy.nd1) Suggests: dicomnifti, fsl-feeds, fsl-first-data, fsl-possum-data, gridengine-client, octave3.0 (>= 3.0.0) Conflicts: fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl_4.1.5.2-3~hardy.nd1_i386.deb Size: 10422262 SHA256: cfad42b08b62ebe951eacb663dc923fde5066e07989d3331d28a381d0f2bfaf1 SHA1: feb4de59dca7e511785115930347d52271f7ac09 MD5sum: 0c253fc7e03e8edaa05b036f3fdc5816 Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various commandline tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-doc Source: fsl Version: 4.1.5.2-3~hardy.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18312 Depends: fslview-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc_4.1.5.2-3~hardy.nd1_all.deb Size: 11149550 SHA256: fb49c6014d7b7a6342d78475aa34427f14e0a2855fc8c899c6313dc0e4d6b556 SHA1: efd8495319d03a432de847c6cd3a035d9baaeb19 MD5sum: 2a52a9f98b6efab1bce9fbfd52af3eea Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various commandline tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: matlab-psychtoolbox-3 Source: psychtoolbox-3-nonfree Version: 3.0.11.20131017-2~nd+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4 Depends: neurodebian-popularity-contest, matlab-psychtoolbox-3-nonfree (= 3.0.11.20131017-2~nd+1), psychtoolbox-3-common (>= 3.0.11.20131017-2~nd+1.dfsg) Recommends: matlab-support Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3_3.0.11.20131017-2~nd+1_all.deb Size: 3766 SHA256: e7e51b61fe2e591422e37002292d1c812df39c71b2ff2118753f48c2532c179b SHA1: 0ad4f458fba8abebb78bd6bda32a2fc557c5e840 MD5sum: 3049e949dec35a98e503f67fee7f5618 Description: toolbox for vision research -- Matlab bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package exposes PTB-3 within Matlab environment. It also provides a convenience script ptb3-matlab to simplify running psychtoolbox in matlab. . See also http://www.psychtoolbox.org/UsingPsychtoolboxOnUbuntu for additional information about systems tune-up and initial configuration. . For now it relies on -nonfree package providing binary builds of all PTB-3 bindings for Matlab. Package: matlab-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.11.20131017-2~nd+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 4050 Depends: neurodebian-popularity-contest, psychtoolbox-3-lib (>= 3.0.11.20131017-2~nd+1.dfsg), psychtoolbox-3-common (>= 3.0.11.20131017-2~nd+1.dfsg), libx11-6, libxext6, libxfixes3, libxi6, freeglut3, libglew1.9, libgl1-mesa-glx, libxmu6, libxpm4 Recommends: libasound2, libdc1394-22, libfreenect0.1, libglib2.0-0, libglu1-mesa, libgstreamer-plugins-base0.10-0, libgstreamer0.10-0, libopenal1, libpciaccess0, libusb-1.0-0 (>= 2:1.0.9~), libxml2, libxrandr2, libxxf86vm1 Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3-nonfree_3.0.11.20131017-2~nd+1_i386.deb Size: 894022 SHA256: effdf9ea70df48e27668e5e691672f796d23704c6e9018130582517a45ad0a38 SHA1: 63da0e7b26cbb3ccae08c9b229849cc095077ea5 MD5sum: c33d473cf017941478c6a848e3301d5f Description: toolbox for vision research -- Matlab binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Matlab built/supported/distributed by upstream. Package: mipav Version: 5.0.0.20100907-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 116 Pre-Depends: debconf (>= 0.5) | debconf-2.0 Depends: openjdk-6-jre | java6-runtime, libjogl-java, libjava3d-java, wget Homepage: http://mipav.cit.nih.gov/ Priority: extra Section: non-free/science Filename: pool/non-free/m/mipav/mipav_5.0.0.20100907-2_all.deb Size: 15272 SHA256: e5979bf557f27455dfe58a2244dbc066f0d5c276ab85cad013fbacc5ab303d60 SHA1: 61e581b87f680c0dbcce05e45ef290c4133fac55 MD5sum: 44ab2224b485d68657f13ac87d35c605 Description: quantitative analysis and visualization of medical images The MIPAV (Medical Image Processing, Analysis, and Visualization) application enables quantitative analysis and visualization of medical images of numerous modalities such as PET, MRI, CT, or microscopy. Using MIPAV's standard user-interface and analysis tools, researchers at remote sites can easily share research data and analyses, thereby enhancing their ability to research, diagnose, monitor, and treat medical disorders. MIPAV provides an interface for plug-ins and serves as the foundation for other projects (e.g. JIST). . This package provides downloader/installer for non-redistributable closed-source version of MIPAV and a convenience startup wrapper. You will have a choice of reviewing the license and accepting or declining it upon installation. Package: octave-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.11.20131017-2~nd+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1261 Depends: neurodebian-popularity-contest, octave-psychtoolbox-3 (>= 3.0.11.20131017-2~nd+1.dfsg), psychtoolbox-3-common (>= 3.0.11.20131017-2~nd+1.dfsg) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/octave-psychtoolbox-3-nonfree_3.0.11.20131017-2~nd+1_i386.deb Size: 341284 SHA256: 8f361b28b53c6aa31e24f1cf0ab20f47db0e7f74e9e1ee135cd9d29c8533b125 SHA1: cf2344659472e5bb65ace1761f8e9fa15a169f6a MD5sum: a3554284c97f87d90ecf15d7144f155f Description: toolbox for vision research -- Octave binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Octave built/supported/distributed by upstream.