Package: afni Version: 0.20141224~dfsg.1-2~nd14.04+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 37561 Depends: neurodebian-popularity-contest, afni-common (= 0.20141224~dfsg.1-2~nd14.04+1), tcsh, gifsicle, libjpeg-progs, freeglut3, libc6 (>= 2.15), libf2c2, libgiftiio0, libgl1-mesa-glx | libgl1, libglib2.0-0 (>= 2.12.0), libglu1-mesa | libglu1, libglw1-mesa | libglw1, libgomp1 (>= 4.2.1), libgsl0ldbl (>= 1.9), libgts-0.7-5 (>= 0.7.6), libice6 (>= 1:1.0.0), libnetcdfc7, libnifti2, libsm6, libvolpack1 (>= 1.0b3), libx11-6, libxext6, libxm4 (>= 2.3.4), libxmu6, libxt6, xmhtml1 (>= 1.1.7-19~), zlib1g (>= 1:1.1.4) Recommends: nifti-bin, bzip2, ffmpeg, netpbm, qhull-bin Suggests: r-base Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni_0.20141224~dfsg.1-2~nd14.04+1_amd64.deb Size: 10235556 SHA256: 986cac40a63e1649d1d49346972847dba840043d841ec37c16429984f917a179 SHA1: 5a5e3d4652bf38727092b5443caf5068465fb8d8 MD5sum: e7fd1b572ae3f2d8f24c0898716abee0 Description: toolkit for analyzing and visualizing functional MRI data AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . In addition to its own format, AFNI understands the NIfTI format and is therefore integrates easily with FSL and FreeSurfer. Package: afni-common Source: afni Version: 0.20141224~dfsg.1-2~nd14.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 13151 Depends: neurodebian-popularity-contest, python, tcsh Recommends: python-mdp, python-nibabel, afni-atlases Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-common_0.20141224~dfsg.1-2~nd14.04+1_all.deb Size: 8449392 SHA256: 642e721554014d8c7f312eccdf2ab7d830dcc7fb4b7b12d913fb3d2850c85448 SHA1: f7ce5837a9f857bd1a1a533224fb063dd904cb01 MD5sum: ac6d35703cc00e7b7cb15e24fc1a2b68 Description: miscellaneous scripts and data files for AFNI AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides the required architecture independent parts of AFNI. Package: afni-dbg Source: afni Version: 0.20141224~dfsg.1-2~nd14.04+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 90755 Depends: neurodebian-popularity-contest Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-dbg_0.20141224~dfsg.1-2~nd14.04+1_amd64.deb Size: 17913478 SHA256: 37676c303a75da9f7c30d362b21a2ac637fd68b445fb804373a60097b469bb3f SHA1: 14cddceef679c7c4447d4387da8723efe7b4d94e MD5sum: ef75613c18c451dc15f164f21346fcb7 Description: debug symbols for AFNI AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides debug symbols which could be useful to troubleshoot and report problems with AFNI. Package: afni-dev Source: afni Version: 0.20141224~dfsg.1-2~nd14.04+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 18923 Depends: neurodebian-popularity-contest Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-dev_0.20141224~dfsg.1-2~nd14.04+1_amd64.deb Size: 3491850 SHA256: 2f7efd3c5e6822411a816486e2408f06d06a9867afd0a40316a5ab751226c555 SHA1: 9242462b417ab608f9f2175db3831eef319d9e0d MD5sum: c0a527a37bffde6ba070d88889a5dd83 Description: header and static libraries for AFNI plugin development AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides the necessary libraries and header files for AFNI plugin development. Package: fsl-5.0-complete Source: fslmeta Version: 5.0.7-1~nd14.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 29 Depends: fsl-5.0-core (>= 5.0.7-1~nd14.04+1~), fsl-atlases (>= 5.0~), fslview, fsl-possum-data (>= 5.0~), fsl-first-data (>= 5.0~) Recommends: fsl-5.0-wiki (>= 5.0.7-1~nd14.04+1~), fsl-5.0-gpu (>= 5.0.7-1~nd14.04+1~) Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: contrib/science Filename: pool/contrib/f/fslmeta/fsl-5.0-complete_5.0.7-1~nd14.04+1_all.deb Size: 3946 SHA256: e59e7e70578eec644ecd13d5a000bd6eb5d2797baa541814b3bd1b020b2c38bf SHA1: 63de6803d489afd79448ca62621a18881144612f MD5sum: a0369c549740148893de8c6d54d669eb Description: metapackage for the entire FSL suite (tools and data) FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Installing this meta package yields a complete FSL 5.0 installation, including all tools and data packages. Package: fsl-complete Source: fslmeta Version: 5.0.7-1~nd14.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 29 Depends: fsl-5.0-complete, fsl-core Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: contrib/science Filename: pool/contrib/f/fslmeta/fsl-complete_5.0.7-1~nd14.04+1_all.deb Size: 3902 SHA256: 2c83e11dbb7138c6ab45bb69d5cc5e6185473e7d877233b881b5faaea770787b SHA1: 5de959518ea5af10f8a7965174da2dbeb9ae68c6 MD5sum: c45e6c0734deb39c5ef0fc603a99f3ce Description: metapackage for the entire FSL suite (tools and data) FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Installing this meta package yields a complete installation of the latest FSL version, including all tools and data packages. Package: matlab-eeglab11 Source: eeglab11 Version: 11.0.0.0~b~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1+nd13.10+1+nd14.04+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 40738 Depends: neurodebian-popularity-contest, matlab-support Recommends: eeglab11-sampledata Priority: extra Section: contrib/science Filename: pool/contrib/e/eeglab11/matlab-eeglab11_11.0.0.0~b~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1+nd13.04+1+nd13.10+1+nd14.04+1_all.deb Size: 11057334 SHA256: 3c693e22752c17312e01fa7ad6cfbb242e54fd7e2c055e533ea045a5d7cc4931 SHA1: 820fe2fbc8a2ba13570b222d3bd3b4e94e5fec58 MD5sum: f60cd3f4e845fb4cbd336b35389dae54 Description: electrophysiological data analysis This is sofwware for processing continuous or event-related EEG or other physiological data. It is designed for use by both novice and expert users. In normal use, the EEGLAB graphic interface calls graphic functions via pop-up function windows. The EEGLAB history mechanism can save the resulting calls to disk for later incorporation into scripts. . This package provides EEGLAB to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtained and installed separately. Package: matlab-spm8 Source: spm8 Version: 8.5236~dfsg.1-1~nd12.10+1+nd13.04+1+nd13.10+1+nd14.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1164 Depends: neurodebian-popularity-contest, matlab-support, spm8-common (= 8.5236~dfsg.1-1~nd12.10+1+nd13.04+1+nd13.10+1+nd14.04+1), make Provides: spm, spm8 Priority: extra Section: contrib/science Filename: pool/contrib/s/spm8/matlab-spm8_8.5236~dfsg.1-1~nd12.10+1+nd13.04+1+nd13.10+1+nd14.04+1_all.deb Size: 172144 SHA256: 39d9e1eb0ccd4db9bfef7ee22719122a0191b681488361f83f4a6104ed1e62a9 SHA1: 70bc06ac89469d7ec88a6ef24e7e2e971e749d0f MD5sum: f0900ca3ca73121487e6528ca858b02e Description: analysis of brain imaging data sequences for Matlab Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides SPM to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtained and installed separately. Package: matlab-support Version: 0.0.21~nd14.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 170 Depends: neurodebian-popularity-contest, debconf (>= 1.3.22) | cdebconf (>= 0.43), debconf (>= 0.5) | debconf-2.0, sudo Recommends: libstdc++6-4.4-dev | libstdc++-dev Suggests: lsb-core Conflicts: matlab (<= 0.0.14~) Replaces: matlab (<= 0.0.14~) Priority: optional Section: contrib/devel Filename: pool/contrib/m/matlab-support/matlab-support_0.0.21~nd14.04+1_all.deb Size: 31568 SHA256: 6169876b5b99d88276f6b80da68c20d973e7bdad8746371d42cc43a6c144c372 SHA1: c4665f81a8848b84e0754b03af5eb2dce4640711 MD5sum: 5b1821c23708833364efc181a24a7a6e Description: distro integration for local MATLAB installations This package does not provide MATLAB. Instead, it configures an existing MATLAB installation to integrate more comfortably in a Debian installation. . Currently it provides /usr/bin/matlab through the alternatives system, offers to work around incompatibilities between the libraries bundled with MATLAB and system libraries, and provides a helper utility meant to be used by other packages to compile MEX extensions. . Install this if you would like your MATLAB installation to behave more like an ordinary Debian package. Other packages may depend on this one if they install MATLAB code, for example in order to compile MEX extensions. Package: pycharm-community-sloppy Version: 4.5.2-1~ndall+0 Architecture: amd64 Maintainer: Yaroslav Halchenko Installed-Size: 226097 Depends: libc6 (>= 2.4), libc6-i386 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), python, openjdk-7-jre | java7-runtime Recommends: ipython Suggests: pep8, flake8, python-nose Provides: pycharm-community Homepage: https://www.jetbrains.com/pycharm Priority: optional Section: contrib/python Filename: pool/contrib/p/pycharm-community-sloppy/pycharm-community-sloppy_4.5.2-1~ndall+0_amd64.deb Size: 106657360 SHA256: 29d481c202db0834a7ad2f23ad5e183ffef9e0c500229e35a55b952e86440a99 SHA1: f55a0ce48b67c80665b5070ef9e45d23229a6a1b MD5sum: 3027325a24fb622ba3f31bf0fa6333eb Description: PyCharm IDE (sloppy packaging) PyCharm provides a heavily featured IDE for developing in Python. It features: syntax highlighting, formatter, code navigation and refactoring, built-in debugger, and more. . This package provides a mere container and installer for distributed upstream tarballs. It by no means qualifies as "proper" Debian package and there is no support for it provided by Debian project. Use at your own risk.