Package: fsl Version: 4.1.5.2-3~hardy.nd1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 29136 Depends: bc, dc, fslview, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1-21), libgd2-noxpm (>= 2.0.35.dfsg) | libgd2-xpm (>= 2.0.35.dfsg), libgdchart-gd2-noxpm | libgdchart-gd2-xpm, libnewmat10ldbl, libnifti1 (>> 1.1.0-2), libpng12-0 (>= 1.2.13-4), libstdc++6 (>= 4.2.1-4), mozilla-firefox | www-browser, tcl8.4 (>= 8.4.7), tcsh | c-shell, tk8.4 (>= 8.4.7), zlib1g (>= 1:1.2.3.3.dfsg-1) Recommends: fsl-atlases, fsl-doc (= 4.1.5.2-3~hardy.nd1) Suggests: dicomnifti, fsl-feeds, fsl-first-data, fsl-possum-data, gridengine-client, octave3.0 (>= 3.0.0) Conflicts: fsl-fslview Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl_4.1.5.2-3~hardy.nd1_amd64.deb Size: 10626684 SHA256: 8e69207601df54527b751b12d9cc8c2340518fc7428885a8cb2709eb87af49f5 SHA1: e40f42b3673e12675d817ae0142056dcb5ef7c32 MD5sum: 8a1655ebfc8a670df9f7dfe26180a329 Description: analysis tools for FMRI, MRI and DTI brain imaging FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various commandline tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . FSL interoperates well with other brain imaging related software. This includes Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support the NIfTI format. Package: fsl-doc Source: fsl Version: 4.1.5.2-3~hardy.nd1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 18312 Depends: fslview-doc Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/doc Filename: pool/non-free/f/fsl/fsl-doc_4.1.5.2-3~hardy.nd1_all.deb Size: 11149550 SHA256: fb49c6014d7b7a6342d78475aa34427f14e0a2855fc8c899c6313dc0e4d6b556 SHA1: efd8495319d03a432de847c6cd3a035d9baaeb19 MD5sum: 2a52a9f98b6efab1bce9fbfd52af3eea Description: documentation for FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various commandline tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. . This package provides the FSL documentation in HTML format. Package: matlab-psychtoolbox-3 Source: psychtoolbox-3-nonfree Version: 3.0.12.20160414-1~ndall Architecture: all Maintainer: NeuroDebian Team Installed-Size: 19 Depends: matlab-psychtoolbox-3-nonfree (= 3.0.12.20160414-1~ndall), psychtoolbox-3-common (>= 3.0.12.20160414-1~ndall.dfsg) Recommends: matlab-support Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3_3.0.12.20160414-1~ndall_all.deb Size: 4072 SHA256: bd12c63e3241d050219b1e62f9aafb3b017740e30539850cc6eaa5c7c8951f99 SHA1: 053d2b9240ea5db072d1f5ca1ae5a62e06d24602 MD5sum: 2bf0008376de050ad3074792a9670734 Description: toolbox for vision research -- Matlab bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package exposes PTB-3 within Matlab environment. It also provides a convenience script ptb3-matlab to simplify running psychtoolbox in matlab. . See also http://www.psychtoolbox.org/UsingPsychtoolboxOnUbuntu for additional information about systems tune-up and initial configuration. . For now it relies on -nonfree package providing binary builds of all PTB-3 bindings for Matlab. Package: matlab-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.12.20160414-1~ndall Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 4876 Depends: psychtoolbox-3-lib (>= 3.0.12.20160414-1~ndall.dfsg), psychtoolbox-3-common (>= 3.0.12.20160414-1~ndall.dfsg), libx11-6, libxext6, libxfixes3, libxi6, freeglut3, libgl1-mesa-glx, libxmu6, libxpm4 Recommends: libasound2, libdc1394-22, libfreenect0.1, libglib2.0-0, libglu1-mesa, libopenal1, libpciaccess0, libusb-1.0-0 (>= 2:1.0.9~), libxml2, libxrandr2, libxxf86vm1 Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3-nonfree_3.0.12.20160414-1~ndall_amd64.deb Size: 1038216 SHA256: cf394c725bd9690cf6b1cbd4673f158449086bec066e4fc0e1490e16896d731b SHA1: 93d225095fc3b096552ba2f441a56a0f8848ae7c MD5sum: 3eac5bb51da248032e675753ec210e96 Description: toolbox for vision research -- Matlab binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Matlab built/supported/distributed by upstream. Package: mipav Version: 5.0.0.20100907-2 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 116 Pre-Depends: debconf (>= 0.5) | debconf-2.0 Depends: openjdk-6-jre | java6-runtime, libjogl-java, libjava3d-java, wget Homepage: http://mipav.cit.nih.gov/ Priority: extra Section: non-free/science Filename: pool/non-free/m/mipav/mipav_5.0.0.20100907-2_all.deb Size: 15272 SHA256: e5979bf557f27455dfe58a2244dbc066f0d5c276ab85cad013fbacc5ab303d60 SHA1: 61e581b87f680c0dbcce05e45ef290c4133fac55 MD5sum: 44ab2224b485d68657f13ac87d35c605 Description: quantitative analysis and visualization of medical images The MIPAV (Medical Image Processing, Analysis, and Visualization) application enables quantitative analysis and visualization of medical images of numerous modalities such as PET, MRI, CT, or microscopy. Using MIPAV's standard user-interface and analysis tools, researchers at remote sites can easily share research data and analyses, thereby enhancing their ability to research, diagnose, monitor, and treat medical disorders. MIPAV provides an interface for plug-ins and serves as the foundation for other projects (e.g. JIST). . This package provides downloader/installer for non-redistributable closed-source version of MIPAV and a convenience startup wrapper. You will have a choice of reviewing the license and accepting or declining it upon installation. Package: octave-psychtoolbox-3-nonfree Source: psychtoolbox-3-nonfree Version: 3.0.12.20160414-1~ndall Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 1783 Depends: octave-psychtoolbox-3 (>= 3.0.12.20160414-1~ndall.dfsg), psychtoolbox-3-common (>= 3.0.12.20160414-1~ndall.dfsg) Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/octave-psychtoolbox-3-nonfree_3.0.12.20160414-1~ndall_amd64.deb Size: 407672 SHA256: 0c18191e39314d6f5a154c89eb3c744b7374242529df197619cd0c5a43448e2f SHA1: 47f002990e5c52cf1be7cb9ffdedee906a26920f MD5sum: 178622ada4309515954981c6ee5412c6 Description: toolbox for vision research -- Octave binary blobs Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains binary builds for Datapixx and Eyelink bindings for Octave built/supported/distributed by upstream.