Package: afni Version: 16.2.07~dfsg.1-1~nd70+1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 46356 Depends: neurodebian-popularity-contest, afni-common (= 16.2.07~dfsg.1-1~nd70+1), tcsh, gifsicle, libjpeg-progs, freeglut3, libc6 (>= 2.11), libexpat1 (>= 2.0.1), libf2c2, libgiftiio0, libgl1-mesa-glx | libgl1, libglib2.0-0 (>= 2.12.0), libglu1-mesa | libglu1, libglw1-mesa | libglw1, libgomp1 (>= 4.2.1), libgsl0ldbl (>= 1.9), libgts-0.7-5 (>= 0.7.6), libice6 (>= 1:1.0.0), libmotif4, libnetcdfc7, libnifti2, libsm6, libvolpack1, libx11-6, libxext6, libxmu6, libxt6, xmhtml1, zlib1g (>= 1:1.1.4) Recommends: nifti-bin, bzip2, ffmpeg, netpbm, qhull-bin Suggests: r-base Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni_16.2.07~dfsg.1-1~nd70+1_amd64.deb Size: 18919412 SHA256: b7c577583666efdc8304e76c985d5e4190bbfe20d5f954e40b33db4fc2b0f6c4 SHA1: 36400da345910e8014da1088986d7bb150d08e0c MD5sum: 39d4a5434d51410f03eca2fe163a8e2e Description: toolkit for analyzing and visualizing functional MRI data AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . In addition to its own format, AFNI understands the NIfTI format and is therefore integrates easily with FSL and FreeSurfer. Package: afni-common Source: afni Version: 16.2.07~dfsg.1-1~nd70+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 14427 Depends: neurodebian-popularity-contest, python, tcsh Recommends: python-mdp, python-nibabel, afni-atlases Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-common_16.2.07~dfsg.1-1~nd70+1_all.deb Size: 10038146 SHA256: 83c8a988d4838c149067625c93a7080e59c665ccaf380c68e2c59ddc30a6f82a SHA1: b8bb7277b4097a2177977f7f240e7b83a073cb94 MD5sum: 337313e3c6365c039d01a82ec2fff50d Description: miscellaneous scripts and data files for AFNI AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides the required architecture independent parts of AFNI. Package: afni-dbg Source: afni Version: 16.2.07~dfsg.1-1~nd70+1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 39480 Depends: neurodebian-popularity-contest, afni (= 16.2.07~dfsg.1-1~nd70+1) Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/debug Filename: pool/contrib/a/afni/afni-dbg_16.2.07~dfsg.1-1~nd70+1_amd64.deb Size: 35673330 SHA256: 265910f9662f6e746400079f8c3b29c2fae86b2d50f30310e9cf0e98f3b1c7ff SHA1: a41054f1d46e36d6409ba55ac373f47033c73e6c MD5sum: 2a1b9d5a642c44257cf38258dd99356e Description: debug symbols for AFNI AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides debug symbols which could be useful to troubleshoot and report problems with AFNI. Package: afni-dev Source: afni Version: 16.2.07~dfsg.1-1~nd70+1 Architecture: amd64 Maintainer: NeuroDebian Team Installed-Size: 23966 Depends: neurodebian-popularity-contest Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-dev_16.2.07~dfsg.1-1~nd70+1_amd64.deb Size: 5944512 SHA256: aa5174d93ee53d40b537a17a361cbd8c7e154b677e90c2aeb8f7b8357ff8068c SHA1: b4e61ff1e31f2898613047bc6d4364bbc33fc3bb MD5sum: a86a13aa0e13d269223d01e10d5446c0 Description: header and static libraries for AFNI plugin development AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides the necessary libraries and header files for AFNI plugin development. Package: fsl-5.0-complete Source: fslmeta Version: 5.0.7-1~nd70+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 29 Depends: fsl-5.0-core (>= 5.0.7-1~nd70+1~), fsl-atlases (>= 5.0~), fslview, fsl-possum-data (>= 5.0~), fsl-first-data (>= 5.0~) Recommends: fsl-5.0-wiki (>= 5.0.7-1~nd70+1~), fsl-5.0-gpu (>= 5.0.7-1~nd70+1~) Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: contrib/science Filename: pool/contrib/f/fslmeta/fsl-5.0-complete_5.0.7-1~nd70+1_all.deb Size: 4120 SHA256: e3883f9e9ea24ddb84de57d9583369d6661dfa2e12f9bf70c43c6ec9d8ae5ccf SHA1: 3beb0ff3889c9ceb9940250763277f02594a66b7 MD5sum: d5b4f6fe2bfe761dbc13c38160d2644e Description: metapackage for the entire FSL suite (tools and data) FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Installing this meta package yields a complete FSL 5.0 installation, including all tools and data packages. Package: fsl-complete Source: fslmeta Version: 5.0.7-1~nd70+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 29 Depends: fsl-5.0-complete, fsl-core Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: contrib/science Filename: pool/contrib/f/fslmeta/fsl-complete_5.0.7-1~nd70+1_all.deb Size: 4070 SHA256: 179c548d1c073b073317de49c71f8bee95a8ae4a012a92200f86d4c11ff4b1f1 SHA1: 654b2b1b062ac686d4931a0e128a350fe0b09057 MD5sum: eaffd80859067490ce873c258cfb910b Description: metapackage for the entire FSL suite (tools and data) FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Installing this meta package yields a complete installation of the latest FSL version, including all tools and data packages. Package: matlab-eeglab11 Source: eeglab11 Version: 11.0.0.0~b~dfsg.1-1~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 40738 Depends: neurodebian-popularity-contest, matlab-support Recommends: eeglab11-sampledata Priority: extra Section: contrib/science Filename: pool/contrib/e/eeglab11/matlab-eeglab11_11.0.0.0~b~dfsg.1-1~nd70+1_all.deb Size: 14149362 SHA256: 1012570170f320fd554e68863fa71b88220c32cd9fb0e8ecd5d834b2e680d13a SHA1: 253f0c3089688b83caeb891e8dd7283890615b41 MD5sum: 48855e006e5b9a5c5eb94804dac64bd2 Description: electrophysiological data analysis This is sofwware for processing continuous or event-related EEG or other physiological data. It is designed for use by both novice and expert users. In normal use, the EEGLAB graphic interface calls graphic functions via pop-up function windows. The EEGLAB history mechanism can save the resulting calls to disk for later incorporation into scripts. . This package provides EEGLAB to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtained and installed separately. Package: matlab-gdf Source: libgdf Version: 0.1.2-2~nd70+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 125 Depends: neurodebian-popularity-contest, libgdf-dev (>= 0.1.2-2~nd70+1), matlab-support Homepage: http://sourceforge.net/projects/libgdf Priority: extra Section: contrib/science Filename: pool/contrib/libg/libgdf/matlab-gdf_0.1.2-2~nd70+1_all.deb Size: 23796 SHA256: 61bbce20ad849c5a7a40068862b5a5d78249c29d93821f883b1b6233f0288db9 SHA1: dca0c381b7bcf97b5b43f30f1830a49dae1e57b2 MD5sum: 0c890224622e0cd2da22c8cb819828ed Description: IO library for the GDF -- Matlab interface GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package builds Matlab bindings for GDF at installation time. Note that this package depends on Matlab -- a commercial software that needs to be obtain and installed separately. Package: matlab-spm8 Source: spm8 Version: 8.5236~dfsg.1-1~nd70+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1251 Depends: neurodebian-popularity-contest, matlab-support, spm8-common (= 8.5236~dfsg.1-1~nd70+1), make Provides: spm, spm8 Priority: extra Section: contrib/science Filename: pool/contrib/s/spm8/matlab-spm8_8.5236~dfsg.1-1~nd70+1_all.deb Size: 233036 SHA256: 665bd05106aca755afa05b8d4f3b6808a53db93eaf2024b9ee5f5ede6f47dde4 SHA1: f2211e27ff5ea8a32d8ee5f8f68db1f36990de39 MD5sum: cce5e9b97d36d5cf112826b7f8bdaa60 Description: analysis of brain imaging data sequences for Matlab Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides SPM to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtained and installed separately. Package: matlab-support Version: 0.0.21~nd70+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 170 Depends: neurodebian-popularity-contest, debconf (>= 1.3.22) | cdebconf (>= 0.43), debconf (>= 0.5) | debconf-2.0, sudo Recommends: libstdc++6-4.4-dev | libstdc++-dev Suggests: lsb-core Conflicts: matlab (<= 0.0.14~) Replaces: matlab (<= 0.0.14~) Priority: optional Section: contrib/devel Filename: pool/contrib/m/matlab-support/matlab-support_0.0.21~nd70+1_all.deb Size: 32508 SHA256: a57cd8fcf8ea8483254be844996ba8b81425b4c9f09bf0d51373bfea116ac9b5 SHA1: 485e1b9582a4380a33cbfbdd56b7790057558766 MD5sum: 7cd5893f0f5f2138279a40e1d0f30be0 Description: distro integration for local MATLAB installations This package does not provide MATLAB. Instead, it configures an existing MATLAB installation to integrate more comfortably in a Debian installation. . Currently it provides /usr/bin/matlab through the alternatives system, offers to work around incompatibilities between the libraries bundled with MATLAB and system libraries, and provides a helper utility meant to be used by other packages to compile MEX extensions. . Install this if you would like your MATLAB installation to behave more like an ordinary Debian package. Other packages may depend on this one if they install MATLAB code, for example in order to compile MEX extensions. Package: pycharm-community-sloppy Version: 4.5.2-1~ndall+0 Architecture: amd64 Maintainer: Yaroslav Halchenko Installed-Size: 226097 Depends: libc6 (>= 2.4), libc6-i386 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), python, openjdk-7-jre | java7-runtime Recommends: ipython Suggests: pep8, flake8, python-nose Provides: pycharm-community Homepage: https://www.jetbrains.com/pycharm Priority: optional Section: contrib/python Filename: pool/contrib/p/pycharm-community-sloppy/pycharm-community-sloppy_4.5.2-1~ndall+0_amd64.deb Size: 106657360 SHA256: 29d481c202db0834a7ad2f23ad5e183ffef9e0c500229e35a55b952e86440a99 SHA1: f55a0ce48b67c80665b5070ef9e45d23229a6a1b MD5sum: 3027325a24fb622ba3f31bf0fa6333eb Description: PyCharm IDE (sloppy packaging) PyCharm provides a heavily featured IDE for developing in Python. It features: syntax highlighting, formatter, code navigation and refactoring, built-in debugger, and more. . This package provides a mere container and installer for distributed upstream tarballs. It by no means qualifies as "proper" Debian package and there is no support for it provided by Debian project. Use at your own risk.