Package: afni Version: 0.20140612~dfsg.1-1~nd12.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 35810 Depends: neurodebian-popularity-contest, afni-common (= 0.20140612~dfsg.1-1~nd12.10+1), tcsh, gifsicle, libjpeg-progs, freeglut3, libc6 (>= 2.15), libf2c2, libgiftiio0, libgl1-mesa-glx | libgl1, libglib2.0-0 (>= 2.12.0), libglu1-mesa | libglu1, libglw1-mesa | libglw1, libgomp1 (>= 4.2.1), libgsl0ldbl (>= 1.9), libgts-0.7-5 (>= 0.7.6), libice6 (>= 1:1.0.0), libmotif4, libnetcdfc7, libnifti2, libsm6, libvolpack1, libx11-6, libxext6, libxmu6, libxt6, xmhtml1, zlib1g (>= 1:1.1.4) Recommends: nifti-bin, bzip2, ffmpeg, netpbm, qhull-bin Suggests: r-base Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni_0.20140612~dfsg.1-1~nd12.10+1_amd64.deb Size: 14776722 SHA256: 0f984daac3a1f38a35d792df7e55c92644c8ad31ae714772c6e6ceb2bc42bec0 SHA1: 8be97691ad598c1edc1e2b8f1e34d61306a340c7 MD5sum: 5773881b4f88bd8da4a292a81d7d828c Description: toolkit for analyzing and visualizing functional MRI data AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . In addition to its own format, AFNI understands the NIfTI format and is therefore integrates easily with FSL and FreeSurfer. Package: afni-common Source: afni Version: 0.20140612~dfsg.1-1~nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 11199 Depends: neurodebian-popularity-contest, python, tcsh Recommends: python-mdp, python-nibabel, afni-atlases Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-common_0.20140612~dfsg.1-1~nd12.10+1_all.deb Size: 7371450 SHA256: 4ba190ac53b9cc6cf8d0e870680e72ef3511fc20c655891f6bd1546bc5258ab3 SHA1: 9414d2968b365e48e19acc728b3230b83adefa69 MD5sum: 34f6331d252244008f9259d9b50b5d88 Description: miscellaneous scripts and data files for AFNI AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides the required architecture independent parts of AFNI. Package: afni-dbg Source: afni Version: 0.20140612~dfsg.1-1~nd12.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 87603 Depends: neurodebian-popularity-contest Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-dbg_0.20140612~dfsg.1-1~nd12.10+1_amd64.deb Size: 28386764 SHA256: 3f4d1dcd9001c6a723bd5ac0ed9e859a88df524bf1d09b8c2ad38b304dfc7898 SHA1: 0fbfbe4642358dc9a662eb819cba409f8c706bbb MD5sum: 4763481ff7c512a5ccc9442dca92aae5 Description: debug symbols for AFNI AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides debug symbols which could be useful to troubleshoot and report problems with AFNI. Package: afni-dev Source: afni Version: 0.20140612~dfsg.1-1~nd12.10+1 Architecture: amd64 Maintainer: NeuroDebian Maintainers Installed-Size: 18359 Depends: neurodebian-popularity-contest Homepage: http://afni.nimh.nih.gov Priority: extra Section: contrib/science Filename: pool/contrib/a/afni/afni-dev_0.20140612~dfsg.1-1~nd12.10+1_amd64.deb Size: 4794754 SHA256: f7fd62e729e503ba2b07bc0ec435d64042801d9c8c527a7ae97b8e827f755a53 SHA1: da01f01003ae2ebbece699e0296df5c615b2c2df MD5sum: 9cc81227a5732dd428fd379a5b62bf49 Description: header and static libraries for AFNI plugin development AFNI is an environment for processing and displaying functional MRI data. It provides a complete analysis toolchain, including 3D cortical surface models, and mapping of volumetric data (SUMA). . This package provides the necessary libraries and header files for AFNI plugin development. Package: fsl-5.0-complete Source: fslmeta Version: 5.0.5-1~nd12.10+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 29 Depends: fsl-5.0-core (>= 5.0.5-1~nd12.10+1~), fsl-5.0-doc (>= 5.0.5-1~nd12.10+1~), fsl-atlases (>= 5.0~), fslview, fsl-possum-data (>= 5.0~), fsl-first-data (>= 5.0~) Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: contrib/science Filename: pool/contrib/f/fslmeta/fsl-5.0-complete_5.0.5-1~nd12.10+1_all.deb Size: 3908 SHA256: 111d72b20a646a20573d6e3c4a41debcc8757c1d52af02e26d70d0d8b36d190d SHA1: 9f860533fb3a6947f3130d0ceb2b82d21a0598a6 MD5sum: dee17a8abc3a5a4baf1875784ea0d0db Description: metapackage for the entire FSL suite (tools and data) FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Installing this meta package yields a complete FSL 5.0 installation, including all tools and data packages. Package: fsl-complete Source: fslmeta Version: 5.0.5-1~nd12.10+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 29 Depends: fsl-5.0-complete Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: contrib/science Filename: pool/contrib/f/fslmeta/fsl-complete_5.0.5-1~nd12.10+1_all.deb Size: 3860 SHA256: 411d549c7fc0f5e02709f592dd1647b30edc5b070ab4c12aba448cace5028b66 SHA1: 560c794d12d1dd100ae263e6cf0c8c1a248be9b2 MD5sum: e2a82eaa7114f32fde1e4666d3d8fac7 Description: metapackage for the entire FSL suite (tools and data) FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Installing this meta package yields a complete installation of the latest FSL version, including all tools and data packages. Package: matlab-eeglab11 Source: eeglab11 Version: 11.0.0.0~b~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 40738 Depends: neurodebian-popularity-contest, matlab-support Recommends: eeglab11-sampledata Priority: extra Section: contrib/science Filename: pool/contrib/e/eeglab11/matlab-eeglab11_11.0.0.0~b~dfsg.1-1~nd11.10+1+nd12.04+1+nd12.10+1_all.deb Size: 14149490 SHA256: b7258ecb469a95dab80bfdd56b470770ea0dc82bf0271c6376ecc36ea30bea22 SHA1: 3111e35b3ff787933cb5e7fe4c0625bb35c5b269 MD5sum: 68bd313b27727aadf4bc4911caf43717 Description: electrophysiological data analysis This is sofwware for processing continuous or event-related EEG or other physiological data. It is designed for use by both novice and expert users. In normal use, the EEGLAB graphic interface calls graphic functions via pop-up function windows. The EEGLAB history mechanism can save the resulting calls to disk for later incorporation into scripts. . This package provides EEGLAB to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtained and installed separately. Package: matlab-spm8 Source: spm8 Version: 8.5236~dfsg.1-1~nd12.10+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 1251 Depends: neurodebian-popularity-contest, matlab-support, spm8-common (= 8.5236~dfsg.1-1~nd12.10+1), make Provides: spm, spm8 Priority: extra Section: contrib/science Filename: pool/contrib/s/spm8/matlab-spm8_8.5236~dfsg.1-1~nd12.10+1_all.deb Size: 236422 SHA256: d5db5d63ed3b84a7fa72932b6863851d8f4b9a9d9d76be9a298d84eef6edd53f SHA1: 1445086e1ebbe4ad485b1e230634d95222d3e069 MD5sum: 296a46304c13b74e482550f1a275e8ce Description: analysis of brain imaging data sequences for Matlab Statistical Parametric Mapping (SPM) refers to the construction and assessment of spatially extended statistical processes used to test hypotheses about functional brain imaging data. These ideas have been instantiated in software that is called SPM. It is designed for the analysis of fMRI, PET, SPECT, EEG and MEG data. . This package provides SPM to be used with Matlab. Note that this package depends on Matlab -- a commercial software that needs to be obtained and installed separately. Package: matlab-support Version: 0.0.19~nd12.10+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 60 Depends: neurodebian-popularity-contest, debconf (>= 1.3.22) | cdebconf (>= 0.43), debconf (>= 0.5) | debconf-2.0, libxp6, sudo Recommends: libstdc++6-4.4-dev | libstdc++-dev Conflicts: matlab (<= 0.0.14~) Replaces: matlab (<= 0.0.14~) Priority: optional Section: contrib/devel Filename: pool/contrib/m/matlab-support/matlab-support_0.0.19~nd12.10+1_all.deb Size: 31830 SHA256: 2973b72cbeea9f42757ba8cba37bfc8714ef0e15cc930a3cd42df689ca4489db SHA1: 2cc6271fd3ed7589a961da92859c79da9c1a13c3 MD5sum: d8c7d823ac22aa751d9629912b4a679d Description: distro integration for local MATLAB installations This package does not provide MATLAB. Instead, it configures an existing MATLAB installation to integrate more comfortably in a Debian installation. . Currently it provides /usr/bin/matlab through the alternatives system, offers to work around incompatibilities between the libraries bundled with MATLAB and system libraries, and provides a helper utility meant to be used by other packages to compile MEX extensions. . Install this if you would like your MATLAB installation to behave more like an ordinary Debian package. Other packages may depend on this one if they install MATLAB code, for example in order to compile MEX extensions. Package: pycharm-community-sloppy Version: 4.5.2-1~ndall+0 Architecture: amd64 Maintainer: Yaroslav Halchenko Installed-Size: 226097 Depends: libc6 (>= 2.4), libc6-i386 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.1.1), python, openjdk-7-jre | java7-runtime Recommends: ipython Suggests: pep8, flake8, python-nose Provides: pycharm-community Homepage: https://www.jetbrains.com/pycharm Priority: optional Section: contrib/python Filename: pool/contrib/p/pycharm-community-sloppy/pycharm-community-sloppy_4.5.2-1~ndall+0_amd64.deb Size: 106657360 SHA256: 29d481c202db0834a7ad2f23ad5e183ffef9e0c500229e35a55b952e86440a99 SHA1: f55a0ce48b67c80665b5070ef9e45d23229a6a1b MD5sum: 3027325a24fb622ba3f31bf0fa6333eb Description: PyCharm IDE (sloppy packaging) PyCharm provides a heavily featured IDE for developing in Python. It features: syntax highlighting, formatter, code navigation and refactoring, built-in debugger, and more. . This package provides a mere container and installer for distributed upstream tarballs. It by no means qualifies as "proper" Debian package and there is no support for it provided by Debian project. Use at your own risk.