Package: fsl Version: 5.0.9-3~nd14.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 55 Depends: fsl-core Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/oldlibs Filename: pool/non-free/f/fsl/fsl_5.0.9-3~nd14.04+1_all.deb Size: 21552 SHA256: 574c40d3da7e2796ec0daff4f26648efb24d48eee75d47bf3430adc2d6d9afa1 SHA1: 3286bcb059e79b800bdf1abfd62080471291c99c MD5sum: 762870f36745b0f22ec8e4a8e57da4c8 Description: transitional dummy package The only purpose of this package is to enable upgrades to the new 'fsl-core' package which replaces 'fsl'. This package can safely be removed. . Users aiming to perform a complete FSL installation (including all data components) are advised to install the 'fsl-complete' package from NeuroDebian. Package: fsl-5.0 Source: fsl Version: 5.0.9-3~nd14.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 52 Depends: fsl-5.0-core Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/oldlibs Filename: pool/non-free/f/fsl/fsl-5.0_5.0.9-3~nd14.04+1_all.deb Size: 20202 SHA256: d392229a0a0c4b10af662813833250bdc584ee0d4b17ca9e0909901ada39405f SHA1: 8be54521facec1def8fec641b3986c6296469c26 MD5sum: 10fa46afd3ece433099cd1e55a4d6ec8 Description: transitional dummy package The only purpose of this package is to enable upgrades to the new 'fsl-5.0-core' package which replaces 'fsl-5.0'. This package can safely be removed. . Users aiming to perform a complete FSL 5.0 installation (including all data components) are advised to install the 'fsl-5.0-complete' package from NeuroDebian. Package: fsl-core Source: fsl Version: 5.0.9-3~nd14.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 70 Depends: fsl-5.0-core Breaks: fsl (<< 5.0.3) Replaces: fsl (<< 5.0.3) Homepage: http://www.fmrib.ox.ac.uk/fsl/ Priority: optional Section: non-free/science Filename: pool/non-free/f/fsl/fsl-core_5.0.9-3~nd14.04+1_all.deb Size: 21404 SHA256: 88b7c31fcf0353cac61a3a7b2d71f02d723feb4bed93a4cbf30f4b9abf3f84b3 SHA1: 5d7d7a248d667d8d2fbd0366ea4adeed51a87e36 MD5sum: f5bb00fb9166e21ce546f59ebf4471e5 Description: metapackage for the latest version of FSL FSL is a comprehensive library of image analysis and statistical tools for fMRI, MRI and DTI brain imaging data. The suite consists of various command line tools, as well as simple GUIs for its core analysis pipelines. Among others, FSL offers implementations of standard GLM analysis, white matter tractography, tissue segmentation, affine and non-linear co-registration, and independent component analysis. . Some FSL components require additional data packages (fsl-atlases, fsl-first-data, fsl-possum-data) that are currently available from the NeuroDebian repository only. For more information on how to obtain these data packages visit http://neuro.debian.net. . Users aiming to perform a complete FSL installation (including all data components) are advised to install the 'fsl-complete' package from NeuroDebian. Package: matlab-psychtoolbox-3 Source: psychtoolbox-3-nonfree Version: 3.0.14.20170611-1~ndall Architecture: all Maintainer: NeuroDebian Team Installed-Size: 19 Depends: matlab-psychtoolbox-3-nonfree (= 3.0.14.20170611-1~ndall), psychtoolbox-3-common (>= 3.0.14.20170611-1~ndall.dfsg) Recommends: matlab-support Homepage: http://psychtoolbox.org Priority: extra Section: non-free/science Filename: pool/non-free/p/psychtoolbox-3-nonfree/matlab-psychtoolbox-3_3.0.14.20170611-1~ndall_all.deb Size: 4160 SHA256: 272cea9125ef32e5ce4ebab7aad2daa579662171a5e1d7f69a8540eedc7a5595 SHA1: 2db5ffdfac2e4aafb90e45b834ed0bd60de76646 MD5sum: 40e8dfce1ee7a617c5eb4c66cdca3394 Description: toolbox for vision research -- Matlab bindings Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package exposes PTB-3 within Matlab environment. It also provides a convenience script ptb3-matlab to simplify running psychtoolbox in matlab. . See also http://www.psychtoolbox.org/UsingPsychtoolboxOnUbuntu for additional information about systems tune-up and initial configuration. . For now it relies on -nonfree package providing binary builds of all PTB-3 bindings for Matlab. Package: python-props Source: props Version: 0.9.14-1~nd14.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 665 Depends: neurodebian-popularity-contest, python-wxgtk3.0, python:any (>= 2.7.5-5~), python-six, python-numpy, python-matplotlib, python-sphinx, python:any (<< 2.8), python-sphinx-rtd-theme Provides: python2.7-props Priority: optional Section: non-free/python Filename: pool/non-free/p/props/python-props_0.9.14-1~nd14.04+1_all.deb Size: 118350 SHA256: c9ff495d2e9c0ca6fb79c4fc4f887af8240b8c855f4b6c9b43878a6d4c5ad66a SHA1: e447e994d1f2ac4625a760ef2f4a64802d780370 MD5sum: db80cb4e0132b79686df6acd3d2de56b Description: Python descriptor framework Event programming framework with the ability for automatic CLI generation, and automatic GUI generation (with wxPython). . This package provides the Python 2 module. Package: virtual-mri-nonfree Source: vmri-nonfree Version: 3.2.14-1~nd12.10+1+nd13.04+1+nd13.10+1+nd14.04+1 Architecture: all Maintainer: NeuroDebian Team Installed-Size: 3020 Depends: neurodebian-popularity-contest, openjdk-7-jre | java-runtime Homepage: http://www.iftm.de/elearning/vmri/idx_vmri.htm Priority: extra Section: non-free/science Filename: pool/non-free/v/vmri-nonfree/virtual-mri-nonfree_3.2.14-1~nd12.10+1+nd13.04+1+nd13.10+1+nd14.04+1_all.deb Size: 1771702 SHA256: 2bf1087b73a5ae7c163ee7d37e5cbb911f3b5d22350b21f3703202cfe53362b4 SHA1: 20fc295238e534c298d4fbe04e9514189749866b MD5sum: 2df66e108c5e49eff77c0b0adb7ad92e Description: Virtual Magnetic Resonance Imager A realistic simulation of magnetic reasonance imaging that allows for exploring the most relevant parameters of a scanner to aid training of students and doctors. . At the moment the pulse sequence classes SR, IR, SE, TSE, FLASH and FISP are implemented. Parameters, like TR, TE, TI, flip-angle or echo train length, can be adjusted. The choice of matrix size, FOV, slice-thickness and number of acquisitions affect the signal-to-noise ratio of the images. In a first step, the simulation calculates the signal intensity in the k-space. Aliasing- and motion-artifacts are simulated by modifying the k-space data. In a last step, a 2D-fouriertransform of the k-space data is performed. Window and center of the resulting images can be changed.