Package: datalad Version: 0.11.7-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 137 Depends: neurodebian-popularity-contest, python3-datalad (= 0.11.7-1~nd110+1), python3-argcomplete, python3:any Suggests: datalad-containers, datalad-crawler, datalad-neuroimaging Homepage: http://datalad.org Priority: optional Section: science Filename: pool/main/d/datalad/datalad_0.11.7-1~nd110+1_all.deb Size: 99412 SHA256: 6f53f19beb43f2d0a07749513939d972b931e65c4c84390664a35c2ba0c0b054 SHA1: 7808c10d4fbf7d20de9577824e83b4b340ce19df MD5sum: 235ed4e6f1aafce43ee4f84a4bdefcbc Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) - extract, aggregate, and search through various sources of metadata (xmp, EXIF, etc; install datalad-neuroimaging for DICOM, BIDS, NIfTI support) - crawl web sites to automatically prepare and update git-annex repositories with content from online websites, S3, etc (install datalad-crawler) . This package provides the command line tools. Install without Recommends if you need only core functionality. Package: dcm2niix Version: 1:1.0.20190720-1~nd110+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 862 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2), libyaml-cpp0.6 (>= 0.6.2) Homepage: https://github.com/rordenlab/dcm2niix Priority: optional Section: science Filename: pool/main/d/dcm2niix/dcm2niix_1.0.20190720-1~nd110+1_i386.deb Size: 207544 SHA256: cf4cf2b1683f5a328a1e57c45a14c7580ee5b635054ed1c80d815a5f7b48e25f SHA1: c752bc190356aba673c80488180c3adf87024ff1 MD5sum: 7cc96c49b63a038b5945010ab7ef0e9f Description: converts DICOM and PAR/REC files into the NIfTI format This is the successor of the well-known dcm2nii program. it aims to provide same functionality albeit with much faster operation. This is a new tool that is not yet well tested, and does not handle ancient proprietary formats. Use with care. Package: dcm2niix-dbgsym Source: dcm2niix Version: 1:1.0.20190720-1~nd110+1 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 983 Depends: dcm2niix (= 1:1.0.20190720-1~nd110+1) Priority: optional Section: debug Filename: pool/main/d/dcm2niix/dcm2niix-dbgsym_1.0.20190720-1~nd110+1_i386.deb Size: 935164 SHA256: eed19f2d8e3773ea8ec570f89cb7d3e9351aa543b38e7581758c4d01f3ca25b1 SHA1: 9222491250379e7a6e95d121b66ebdf7bf0713eb MD5sum: 950f7d3bc370c65ce484378ea68173c4 Description: debug symbols for dcm2niix Build-Ids: 31eacac3ac592b8d1028a4a5a842217116b78089 f2b876c2e55f66d6d4ed4f08e4a9d2327cca8cda Package: gdf-tools Source: libgdf Version: 0.1.3-3~nd110+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 121 Depends: neurodebian-popularity-contest, libboost-filesystem1.67.0, libboost-program-options1.67.0, libboost-system1.67.0, libc6 (>= 2.4), libgcc1 (>= 1:3.0), libgdf0 (>= 0.1.3), libstdc++6 (>= 5.2) Homepage: https://github.com/mbillingr/libgdf Priority: optional Section: utils Filename: pool/main/libg/libgdf/gdf-tools_0.1.3-3~nd110+1_i386.deb Size: 35456 SHA256: 4b3dd86891a0fb97501d6868698294ecceb0cd808ea7a431478ccf79842a3e7a SHA1: 3f8c72401bbbcbdea9ec48cdac9f3624173761e7 MD5sum: f53474d967b8fd3e562246eaa57e39e5 Description: IO library for the GDF -- helper tools GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides the tool shipped with the library (gdf_merger). Package: gdf-tools-dbgsym Source: libgdf Version: 0.1.3-3~nd110+1 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 385 Depends: gdf-tools (= 0.1.3-3~nd110+1) Priority: optional Section: debug Filename: pool/main/libg/libgdf/gdf-tools-dbgsym_0.1.3-3~nd110+1_i386.deb Size: 355824 SHA256: c030955f953e503ba25123c180425ecd0eda1e5f52ca0bf216347f2c56d5ed6e SHA1: 49233e3718f567da178510546af5f1314dad7d76 MD5sum: ab212dc6f287fbf3ee5b47b157218e5b Description: debug symbols for gdf-tools Build-Ids: 89d97b441f41e32b54bb80c27b17f69726babea2 Package: git-annex-standalone Source: git-annex Version: 7.20190819+git2-g908476a9b-1~ndall+1 Architecture: i386 Maintainer: Richard Hartmann Installed-Size: 175310 Depends: git, netbase, openssh-client Recommends: lsof, gnupg, bind9-host, youtube-dl, git-remote-gcrypt (>= 0.20130908-6), nocache, aria2 Suggests: xdot, bup, adb, tor, magic-wormhole, tahoe-lafs, libnss-mdns, uftp Conflicts: git-annex Breaks: datalad (<= 0.11.1~) Provides: git-annex Homepage: http://git-annex.branchable.com/ Priority: optional Section: utils Filename: pool/main/g/git-annex/git-annex-standalone_7.20190819+git2-g908476a9b-1~ndall+1_i386.deb Size: 64740696 SHA256: 8f5db707ee521d8d8b96e53474d6c4e569de1a40056992ce4329b8c267887b3b SHA1: 044097ed2530eb2998cb8b94dc3a84cbd17f4d3c MD5sum: 4a832a10423b0b007a110ba3c01ef729 Description: manage files with git, without checking their contents into git -- standalone build git-annex allows managing files with git, without checking the file contents into git. While that may seem paradoxical, it is useful when dealing with files larger than git can currently easily handle, whether due to limitations in memory, time, or disk space. . It can store large files in many places, from local hard drives, to a large number of cloud storage services, including S3, WebDAV, and rsync, with a dozen cloud storage providers usable via plugins. Files can be stored encrypted with gpg, so that the cloud storage provider cannot see your data. git-annex keeps track of where each file is stored, so it knows how many copies are available, and has many facilities to ensure your data is preserved. . git-annex can also be used to keep a folder in sync between computers, noticing when files are changed, and automatically committing them to git and transferring them to other computers. The git-annex webapp makes it easy to set up and use git-annex this way. . This package provides a standalone bundle build of git-annex, which should be installable on any more or less recent Debian or Ubuntu release. Package: libgdf-dev Source: libgdf Version: 0.1.3-3~nd110+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 126 Depends: neurodebian-popularity-contest, libgdf0 (= 0.1.3-3~nd110+1) Homepage: https://github.com/mbillingr/libgdf Priority: optional Section: libdevel Filename: pool/main/libg/libgdf/libgdf-dev_0.1.3-3~nd110+1_i386.deb Size: 21100 SHA256: 2da2de20b454b5b568d343ff4d2e992e1c1e2f56c5f37bcd070a3f1b232d6d2d SHA1: 8f15c8c7b02dca7507a42d9d85ef2bdf74d56692 MD5sum: 1df2e929237ea4598c429c8a2b6ab249 Description: IO library for the GDF -- development library GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides the header files and static library. Package: libgdf0 Source: libgdf Version: 0.1.3-3~nd110+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 341 Depends: neurodebian-popularity-contest, libc6 (>= 2.4), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2) Homepage: https://github.com/mbillingr/libgdf Priority: optional Section: libs Filename: pool/main/libg/libgdf/libgdf0_0.1.3-3~nd110+1_i386.deb Size: 103652 SHA256: 3e53dd4997cb52ae5c9fd10cd110590357d396d22fb391ebc516ce02c2783354 SHA1: 0183cc3adda44dde34e1516c94f3cc0af7d2aa1e MD5sum: 5b77ca06fca5c638795ea7cebdb351f6 Description: IO library for the GDF (general dataformat for biosignals) GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package contains the shared library. Package: libgdf0-dbgsym Source: libgdf Version: 0.1.3-3~nd110+1 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1249 Depends: libgdf0 (= 0.1.3-3~nd110+1) Priority: optional Section: debug Filename: pool/main/libg/libgdf/libgdf0-dbgsym_0.1.3-3~nd110+1_i386.deb Size: 1198528 SHA256: 377487add47c023fa229f718da564e92c0d5ae8097867f0224a565603d2b2796 SHA1: 77b4d1f9f71ed88545a867852296978e7e682413 MD5sum: 1d497dd6ce78bb53e80c3f7b2a251013 Description: debug symbols for libgdf0 Build-Ids: 0349ed4d5d85e0e2cfd29efe819a639f7b3a277f Package: octave-gdf Source: libgdf Version: 0.1.3-3~nd110+1 Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 339 Depends: neurodebian-popularity-contest, octave (>= 4.4.1), libc6 (>= 2.4), libgcc1 (>= 1:4.2), libgdf0 (>= 0.1.3), libgomp1 (>= 4.2.1), liboctave6, libstdc++6 (>= 5.2) Homepage: https://github.com/mbillingr/libgdf Priority: optional Section: science Filename: pool/main/libg/libgdf/octave-gdf_0.1.3-3~nd110+1_i386.deb Size: 86584 SHA256: 9fefcd702276308f04de55b5fefcea5fc853eef3e72e5b402fa40fed1ac35d35 SHA1: 89edbbdafe4b2da1d1e4ec44b57f9283df5d9cb6 MD5sum: 67658efbc0af05a62021db6c31c0b98f Description: IO library for the GDF -- Octave interface GDF (General Dataformat for Biosignals) is intended to provide a generic storage for biosignals, such as EEG, ECG, MEG etc. . This package provides Octave bindings for libgdf. Package: octave-gdf-dbgsym Source: libgdf Version: 0.1.3-3~nd110+1 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: NeuroDebian Maintainers Installed-Size: 1121 Depends: octave-gdf (= 0.1.3-3~nd110+1) Priority: optional Section: debug Filename: pool/main/libg/libgdf/octave-gdf-dbgsym_0.1.3-3~nd110+1_i386.deb Size: 1059696 SHA256: cf32a53a753f8daae218de2bbe4d19bc8483a84866a096ddd91294b6514af64e SHA1: 7c900e76617d71363282e39e4d5ed53cebd80f0f MD5sum: c1645bb4ac115f58fae444880ff46cd2 Description: debug symbols for octave-gdf Build-Ids: 167000e3e634c3b3ce4751070a759d12b9dd354a f525120201cb27f5a71e32e271fdec83524109ee Package: python3-datalad Source: datalad Version: 0.11.7-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4568 Depends: neurodebian-popularity-contest, git-annex (>= 6.20180913~) | git-annex-standalone (>= 6.20180913~), patool, python3-appdirs, python3-distutils | libpython3-stdlib (<= 3.6.4~rc1-2), python3-fasteners, python3-git (>= 2.1.6~), python3-humanize, python3-iso8601, python3-keyrings.alt | python3-keyring (<= 8), python3-secretstorage, python3-keyring, python3-mock, python3-msgpack, python3-pil, python3-requests, python3-simplejson, python3-six (>= 1.8.0), python3-tqdm, python3-wrapt, python3-boto, python3-chardet, python3:any Recommends: python3-exif, python3-github, python3-jsmin, python3-html5lib, python3-httpretty, python3-libxmp, python3-lzma, python3-mutagen, python3-nose, python3-pyperclip, python3-requests-ftp, python3-vcr, python3-whoosh Suggests: python3-duecredit, python3-bs4, python3-numpy, datalad-containers, datalad-crawler, datalad-neuroimaging Homepage: http://datalad.org Priority: optional Section: python Filename: pool/main/d/datalad/python3-datalad_0.11.7-1~nd110+1_all.deb Size: 948924 SHA256: 1b7d811528dd59ec6d7326fc08b52806a4b1dc890eca62fb1a12b6d8db21e7d8 SHA1: 68e11e1eb83001b8ab0954a27d1d6153f9a23a9b MD5sum: 61a8c0a39ee7427e0d09fa89454bc160 Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) - extract, aggregate, and search through various sources of metadata (xmp, EXIF, etc; install datalad-neuroimaging for DICOM, BIDS, NIfTI support) - crawl web sites to automatically prepare and update git-annex repositories with content from online websites, S3, etc (install datalad-crawler) . This package installs the module for Python 3, and Recommends install all dependencies necessary for searching and managing datasets, publishing, and testing. If you need base functionality, install without Recommends. Package: python3-hdmf Source: hdmf Version: 1.1.2-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 392 Depends: neurodebian-popularity-contest, python3-dateutil, python3-h5py, python3-numpy, python3-pandas, python3-requests, python3-ruamel.yaml, python3-six, python3:any, python3-certifi, python3-chardet, python3-idna, python3-urllib3 Homepage: https://github.com/hdmf-dev/hdmf Priority: optional Section: python Filename: pool/main/h/hdmf/python3-hdmf_1.1.2-1~nd110+1_all.deb Size: 63672 SHA256: ae1c5f98e5e75b469c43f879721ab57561b69b14086575b455bebafff545caf4 SHA1: b0629cd131b4672d0f7c2d072f9e7215a462ca62 MD5sum: 64e5974e6b2358f9b349259f637437e5 Description: Hierarchical Data Modeling Framework The Hierarchical Data Modeling Framework (HDMF) is a Python package for working with hierarchical data. It provides APIs for specifying data models, reading and writing data to different storage backends, and representing data with Python object. Package: python3-neo Source: neo Version: 0.7.2-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3485 Depends: neurodebian-popularity-contest, python3-numpy, python3-quantities, python3:any Recommends: python3-scipy (>= 0.8~), python3-tables (>= 2.2~), libjs-jquery, libjs-underscore Suggests: python3-nose Homepage: http://neuralensemble.org/trac/neo Priority: optional Section: python Filename: pool/main/n/neo/python3-neo_0.7.2-1~nd110+1_all.deb Size: 1309360 SHA256: a648f225bf07f9678c0d5a16f333d1bf2a7dddda7b5b0906a0ffe4929cee3bd7 SHA1: 44734afa69009303db86e70925e6f9cc8cc0daad MD5sum: 66958ad49e2f13d1d97955f8f1ec887e Description: Python IO library for electrophysiological data formats NEO stands for Neural Ensemble Objects and is a project to provide common classes and concepts for dealing with electro-physiological (in vivo and/or simulated) data to facilitate collaborative software/algorithm development. In particular Neo provides: a set a classes for data representation with precise definitions, an IO module with a simple API, documentation, and a set of examples. . NEO offers support for reading data from numerous proprietary file formats (e.g. Spike2, Plexon, AlphaOmega, BlackRock, Axon), read/write support for various open formats (e.g. KlustaKwik, Elan, WinEdr, WinWcp, PyNN), as well as support common file formats, such as HDF5 with Neo-structured content (NeoHDF5, NeoMatlab). . Neo's IO facilities can be seen as a pure-Python and open-source Neuroshare replacement. Package: python3-pynwb Source: pynwb Version: 1.0.3-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 424 Depends: neurodebian-popularity-contest, python3-chardet, python3-dateutil, python3-h5py (>= 2.7.1), python3-hdmf, python3-numpy, python3-pandas, python3-ruamel.yaml, python3-six, python3:any Homepage: https://github.com/NeurodataWithoutBorders/pynwb Priority: optional Section: python Filename: pool/main/p/pynwb/python3-pynwb_1.0.3-1~nd110+1_all.deb Size: 60480 SHA256: 0bfbc0e279e515a0ce05da671d3f5c2cbebddcc4f26d91f2b5d31c5d6eb55c75 SHA1: c2a15401e2a757cd6d9f802532f7ed53af6df4bf MD5sum: f124f2fbebd81f8c8c69dca1a32a1d95 Description: Python library for working with Neurodata in the NWB format PyNWB is a Python package for working with NWB files. It provides a high-level API for efficiently working with Neurodata stored in the NWB format. . Neurodata Without Borders: Neurophysiology (NWB:N) is a project to develop a unified data format for cellular-based neurophysiology data, focused on the dynamics of groups of neurons measured under a large range of experimental conditions. Package: python3-quantities Source: python-quantities Version: 0.12.3-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 354 Depends: neurodebian-popularity-contest, python3-numpy, python3:any Suggests: python3-unittest2 Homepage: http://packages.python.org/quantities/ Priority: optional Section: python Filename: pool/main/p/python-quantities/python3-quantities_0.12.3-1~nd110+1_all.deb Size: 57624 SHA256: 04af7004229d545ef71e61da555608447eb34882c890c120be6c0877321cad03 SHA1: e2461fd99e38f6dddbc79963a0844cecd49e3e35 MD5sum: 3d4cee6b7093dac06d5a3e2cee06a000 Description: Library for computation of physical quantities with units, based on numpy Quantities is designed to handle arithmetic and conversions of physical quantities, which have a magnitude, dimensionality specified by various units, and possibly an uncertainty. Quantities builds on the popular numpy library and is designed to work with numpy ufuncs, many of which are already supported.