Package: datalad Version: 0.11.8-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 136 Depends: neurodebian-popularity-contest, python3-datalad (= 0.11.8-1~nd110+1), python3-argcomplete, python3:any Suggests: datalad-containers, datalad-crawler, datalad-neuroimaging Homepage: http://datalad.org Priority: optional Section: science Filename: pool/main/d/datalad/datalad_0.11.8-1~nd110+1_all.deb Size: 99536 SHA256: fd73d5aa3e1ab445b79cf6774182b52302db2d911f946c81f1819fdfa4556129 SHA1: 1348efd436113ed46f9aade60e4788997ad04111 MD5sum: cc7594e3721f573b93e8d3ffc8c311aa Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) - extract, aggregate, and search through various sources of metadata (xmp, EXIF, etc; install datalad-neuroimaging for DICOM, BIDS, NIfTI support) - crawl web sites to automatically prepare and update git-annex repositories with content from online websites, S3, etc (install datalad-crawler) . This package provides the command line tools. Install without Recommends if you need only core functionality. Package: git-all Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 831 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), git-doc, git-el, git-cvs, git-mediawiki, git-svn, git-email, git-gui, gitk, gitweb Recommends: git-daemon-run | git-daemon-sysvinit Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-all_2.24.0-1~nd110+1_all.deb Size: 834264 SHA256: f0f5ca93771c8e94a1bde29871c4a82632b315377e11bff5c79ae2223cbe5903 SHA1: 2ddb0735422680fb81e84d785e2da43140de0d8a MD5sum: 2e58d5a416c024006e909d201f1e7c22 Description: fast, scalable, distributed revision control system (all subpackages) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This is a dummy package which brings in all subpackages. Package: git-cvs Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1212 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), cvsps, libdbd-sqlite3-perl Suggests: git-doc, cvs Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-cvs_2.24.0-1~nd110+1_all.deb Size: 897196 SHA256: 04ede31536eb9b1c0dbee100a9e7cbff4fbb6964d0cea755a2adeca53b7691b0 SHA1: 79b2fe618b33a1789d962a836c47ba635e2bf413 MD5sum: 0982679c449e5461a0f34b3de7f1710e Description: fast, scalable, distributed revision control system (cvs interoperability) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the git cvsimport, cvsexportcommit, and cvsserver tools, which allow Git to read from and write to CVS repositories and offer access over CVS protocol to Git repositories. . The git cvsimport tool can incrementally import from a repository that is being actively developed and only requires remote access over CVS protocol. Unfortunately, in many situations the import leads to incorrect results. For reliable, one-shot imports, cvs2git from the cvs2svn package or parsecvs may be a better fit. Package: git-daemon-run Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 843 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), runit, adduser Conflicts: git-daemon-sysvinit Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-daemon-run_2.24.0-1~nd110+1_all.deb Size: 835888 SHA256: c7df90730cebe34a233a7f29ad9698cb388d3e430897af92b94ef6a62318cd52 SHA1: aad6d89536f32ed81f2b1410fa8d9ba5e6a3ee13 MD5sum: 09873a6f07fbdd079c58507bfad5c5a5 Description: fast, scalable, distributed revision control system (git-daemon service) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . git-daemon, as provided by the git package, is a simple server for git repositories, ideally suited for read-only updates, i.e. pulling from git repositories through the network. This package provides a runit service for running git-daemon permanently. This configuration is simpler and more reliable than git-daemon-sysvinit, at a cost of being less familiar for administrators accustomed to sysvinit. Package: git-daemon-sysvinit Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 846 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), adduser, lsb-base (>= 3.0-6) Conflicts: git-daemon-run Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-daemon-sysvinit_2.24.0-1~nd110+1_all.deb Size: 836940 SHA256: 3f6a5731eaf2c06ba958dd41ce89d4fcac51c7cae44ed1db9f889e07ff087932 SHA1: d8d606531cf3d102e2784204996fc2bec02a8658 MD5sum: 4e8068dcbf1472e9d4d2541bee3717e4 Description: fast, scalable, distributed revision control system (git-daemon service) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . git-daemon, as provided by the git package, is a simple server for git repositories, ideally suited for read-only updates, i.e. pulling from git repositories through the network. This package provides a sysvinit service for running git-daemon permanently. Unlike git-daemon-run, this package provides the usual sysvinit service management commands ("service git-daemon start/stop") for git-daemon. Package: git-doc Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 11642 Depends: neurodebian-popularity-contest Suggests: git, git-cvs, git-svn, git-email, gitk, gitweb Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: doc Filename: pool/main/g/git/git-doc_2.24.0-1~nd110+1_all.deb Size: 1837148 SHA256: c7be1f7f970e54e2cc2875e599e50f1a858ae029b1e17b308255793649414441 SHA1: 25b5637ea52e0100054c4e8ddec0f54288910bdf MD5sum: 1d74636d4c9a362c257f858f8da3ca58 Description: fast, scalable, distributed revision control system (documentation) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the documentation. Package: git-el Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 854 Depends: neurodebian-popularity-contest, git (>= 1:1.7.4.1-2~), emacs | emacsen Recommends: elpa-magit Breaks: git (<< 1:1.7.4.1-2~) Replaces: git (<< 1:1.7.4.1-2~) Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-el_2.24.0-1~nd110+1_all.deb Size: 836648 SHA256: 7f774522a6ee8426db9f7371aea83d5934a452ddb514a275c8f9e72c5f2d93a3 SHA1: 1ff86c25be1a0080a4d9c5eaed156852cc028e3c MD5sum: ab8dcea1a6b7d3c829dddc81e73e279a Description: fast, scalable, distributed revision control system (emacs support) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This transitional package provides two modules that previously could be used for integration with Emacs: git.el and git-blame.el. Now the modules print an error message with instructions that users can use to migrate to Emacs's VC-mode backend for Git or Magit. Package: git-email Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 900 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.) Recommends: libemail-valid-perl, libmailtools-perl, perl (>> 5.21.5) | libnet-smtp-ssl-perl, libauthen-sasl-perl, libio-socket-ssl-perl (>= 1.951) Suggests: git-doc Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-email_2.24.0-1~nd110+1_all.deb Size: 859544 SHA256: 5bd20e0218d0b9e3073e700c3846e6cd1cf92e97cb7b89f39e884c5ae8a0b34c SHA1: ed8a6bbd19f966f8c85eeaf6608dd393df762a62 MD5sum: 03865828902819da2fe6553b4588c080 Description: fast, scalable, distributed revision control system (email add-on) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the git-send-email program for sending series of patch emails. Package: git-gui Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2313 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), tk Recommends: gitk Suggests: git-doc, aspell, meld Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-gui_2.24.0-1~nd110+1_all.deb Size: 1044552 SHA256: 6d2f7533e8406b5998fc95384f34d1938de034f308c28ffb7b093647c7be7159 SHA1: bf65efa2eea45ae7e95a91e7ae20923bc05d7914 MD5sum: 6ef8045f3e0710441149daa51acbd6b0 Description: fast, scalable, distributed revision control system (GUI) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the git graphical user interface. . If aspell is installed, it can check the spelling of commit messages as the user types. . If meld is installed, it can be used for displaying diffs and for interactive merge conflict resolution. Package: git-man Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1748 Depends: neurodebian-popularity-contest Breaks: git (<< 1:1.7.4~rc1) Replaces: git (<< 1:1.7.4~rc1), git-core (<< 1:1.7.0.4-1.) Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: doc Filename: pool/main/g/git/git-man_2.24.0-1~nd110+1_all.deb Size: 1695108 SHA256: 27d380bc482184b87b6d9ecbf3006fe7ee84c8ab49d4704611d33755ae1eca17 SHA1: 13342ce1afdee7feb96204e3144776bf37a9af20 MD5sum: 9cb62ace4803624fc29f1853be145e48 Description: fast, scalable, distributed revision control system (manual pages) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides reference documentation for use by the 'man' utility and the 'git help' command. Package: git-mediawiki Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 890 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), libmediawiki-api-perl (>= 0.39), liblwp-protocol-https-perl, libdatetime-format-iso8601-perl Suggests: mediawiki Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-mediawiki_2.24.0-1~nd110+1_all.deb Size: 850228 SHA256: f0675d1ce83f42a0517ac455c99e2be9d10aa009e9303bbc3ad9909a6f58086b SHA1: 8bb98eec61d502924a29dcfa46df42aca4436757 MD5sum: f88a442eaa77545a75ec9c8eebb9add8 Description: fast, scalable, distributed revision control system (MediaWiki remote helper) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the mediawiki remote helper, which allows Git to read from and write to a wiki such as Wikipedia as though it were a remote Git repository, and a 'git mw' command that can show a preview of how wiki markup will be rendered before pushing. Package: git-svn Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1077 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), libsvn-perl, libyaml-perl, libterm-readkey-perl Suggests: git-doc, subversion Breaks: git (<< 1:1.8.3~rc1-1.) Replaces: git (<< 1:1.8.3~rc1-1.) Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/git-svn_2.24.0-1~nd110+1_all.deb Size: 909468 SHA256: 274543dbce13a6f8ab9fd1699a138a414dfa7ece4eb8bc4bb037619c1369a59b SHA1: 39f89c6079afb71377927de0930410e5cfda087e MD5sum: ef78cd0f271a33a30ce2be2f69094c60 Description: fast, scalable, distributed revision control system (svn interoperability) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides tools for interoperating with Subversion repositories, and importing SVN development history. Package: gitk Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 1612 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), tk Suggests: git-doc Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/gitk_2.24.0-1~nd110+1_all.deb Size: 969448 SHA256: 5faa1d089dfd44b2ceab09e734f6aa771396046b766d3e5c6a637766fbbd44c3 SHA1: 09ec79e47505ede3530b313137ad2b738289ec6c MD5sum: 21244a2175f6afae06723c491776817c Description: fast, scalable, distributed revision control system (revision tree visualizer) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package provides the gitk program, a tcl/tk revision tree visualizer. Package: gitweb Source: git Version: 1:2.24.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 853 Depends: neurodebian-popularity-contest, git (>> 1:2.24.0), git (<< 1:2.24.0-.), perl, libcgi-pm-perl Recommends: apache2 (>= 2.4.6-4~) | lynx | httpd, libhttp-date-perl | libtime-parsedate-perl Suggests: httpd-cgi | libcgi-fast-perl, git-doc Breaks: apache2.2-common (<< 2.3~) Multi-Arch: foreign Homepage: https://git-scm.com/ Priority: optional Section: vcs Filename: pool/main/g/git/gitweb_2.24.0-1~nd110+1_all.deb Size: 838528 SHA256: 6caefee972cc58aadeff10861e48d715ccf7587813a4131f22ceb96eafa36715 SHA1: ac74e8f0880876c35f30eba753551eefbfb3fee0 MD5sum: 815525c79a883d14841d331a3a5003dd Description: fast, scalable, distributed revision control system (web interface) Git is popular version control system designed to handle very large projects with speed and efficiency; it is used for many high profile open source projects, most notably the Linux kernel. . Git falls in the category of distributed source code management tools. Every Git working directory is a full-fledged repository with full revision tracking capabilities, not dependent on network access or a central server. . This package configures a web interface for browsing git repositories. . If apache2 is installed, the web interface is automatically made available at http://localhost/gitweb. Other servers that support CGI or mod_perl are supported through manual configuration. . If libcgi-fast-perl is installed, gitweb can also be run over FastCGI (and served by nginx, for example). Package: libglm-dev Source: glm Version: 0.9.9.6-1+nd1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 2159 Depends: neurodebian-popularity-contest Multi-Arch: foreign Homepage: https://glm.g-truc.net/ Priority: optional Section: libdevel Filename: pool/main/g/glm/libglm-dev_0.9.9.6-1+nd1~nd110+1_all.deb Size: 175968 SHA256: d77a73a63a6e04c86e024faf3f686d3f604a6f9855e5804a513950c5d3dfc59b SHA1: c24aeae1f4b55c78691dccd01209db4f3587785a MD5sum: b189c5265e3b10278fd4de3c1ff95ae4 Description: C++ library for OpenGL GLSL type-based mathematics OpenGL Mathematics (GLM) is a header only C++ mathematics library for graphics software based on the OpenGL Shading Language (GLSL) specification. . GLM provides classes and functions designed and implemented with the same naming conventions and functionalities as GLSL, so that when a programmer knows GLSL, he knows GLM as well, which makes it really easy to use. . This project isn't limited to GLSL features. An extension system, based on the GLSL extension conventions, provides extended capabilities: matrix transformations, quaternions, half-based types, random numbers, et cetera. . This library works perfectly together with OpenGL but it also ensures interoperability with other third party libraries and SDKs. It is a good candidate for software rendering (such as raytracing, rasterisation), image processing, physic simulations and any context that requires a simple and convenient mathematics library. Package: libglm-doc Source: glm Version: 0.9.9.6-1+nd1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 12702 Depends: neurodebian-popularity-contest Recommends: libjs-jquery Multi-Arch: foreign Homepage: https://glm.g-truc.net/ Priority: optional Section: doc Filename: pool/main/g/glm/libglm-doc_0.9.9.6-1+nd1~nd110+1_all.deb Size: 499120 SHA256: 749dcb54b906481a72a23a8ee15207334ec3b482fc238574027f63aad836df5c SHA1: ec24b109143880c1607b8ba1b228770a9c86ad75 MD5sum: e206159e93bf8da09e9f4dbed9f97b39 Description: documentation for the OpenGL Mathematics (GLM) library OpenGL Mathematics (GLM) is a header only C++ mathematics library for graphics software based on the OpenGL Shading Language (GLSL) specification. . This package contains the OpenGL Mathematics manual in HTML and PDF formats. Package: psychtoolbox-3-common Source: psychtoolbox-3 Version: 3.0.15.20190725.dfsg1-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 253689 Depends: neurodebian-popularity-contest Recommends: alsa-utils, libgamemode0 Suggests: gnuplot Homepage: http://psychtoolbox.org Priority: optional Section: science Filename: pool/main/p/psychtoolbox-3/psychtoolbox-3-common_3.0.15.20190725.dfsg1-1~nd110+1_all.deb Size: 23936956 SHA256: 29e2f27b2049fa2cb86ec915eff212d90eeb80a575dadbcb911002aeb565ab01 SHA1: 8bf646abaf5fc75b3a0fa452bb08faa1340ca607 MD5sum: da5cef5d8aed50e4afc529ed4e656be4 Description: toolbox for vision research -- arch/interpreter independent part Psychophysics Toolbox Version 3 (PTB-3) is a free set of Matlab and GNU/Octave functions for vision research. It makes it easy to synthesize and show accurately controlled visual and auditory stimuli and interact with the observer. . The Psychophysics Toolbox interfaces between Matlab or Octave and the computer hardware. The Psychtoolbox's core routines provide access to the display frame buffer and color lookup table, allow synchronization with the vertical retrace, support millisecond timing, allow access to OpenGL commands, and facilitate the collection of observer responses. Ancillary routines support common needs like color space transformations and the QUEST threshold seeking algorithm. . This package contains architecture independent files (such as .m scripts) Package: python-nibabel Source: nibabel Version: 2.5.1-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 65854 Depends: neurodebian-popularity-contest, python-numpy, python-six (>= 1.3), python2.7:any, python2:any (<< 2.8), python2:any (>= 2.7~), python-scipy, python-bz2file Recommends: python-dicom, python-fuse Suggests: python-nibabel-doc, python-mock Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: python Filename: pool/main/n/nibabel/python-nibabel_2.5.1-1~nd110+1_all.deb Size: 2666172 SHA256: 7a49a8dcd4b5290d442af58f6a7c827a9b504b9f7743590e73c214a3d178e8c5 SHA1: 87a80be532a6bc7ee633185c6897daea53c9fbf1 MD5sum: 155cd628a0e938bd36d9ec72af06d484 Description: Python bindings to various neuroimaging data formats NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package also provides a commandline tools: . - dicomfs - FUSE filesystem on top of a directory with DICOMs - nib-ls - 'ls' for neuroimaging files - parrec2nii - for conversion of PAR/REC to NIfTI images Package: python-nibabel-doc Source: nibabel Version: 2.5.1-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 9331 Depends: neurodebian-popularity-contest, libjs-jquery, libjs-mathjax Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: doc Filename: pool/main/n/nibabel/python-nibabel-doc_2.5.1-1~nd110+1_all.deb Size: 1503748 SHA256: 00c3a339dc0c06f1673d25dc95c8c83efb1c7dd11aacee0ff4e6433cce37e535 SHA1: 5675d7c38ea745ed0b38c706ecb5b145bde72500 MD5sum: 65c6e2afce984319a75f3d07c6de389f Description: documentation for NiBabel NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. . This package provides the documentation in HTML format. Package: python3-datalad Source: datalad Version: 0.11.8-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 4573 Depends: neurodebian-popularity-contest, git-annex (>= 6.20180913~) | git-annex-standalone (>= 6.20180913~), patool, python3-appdirs, python3-distutils | libpython3-stdlib (<= 3.6.4~rc1-2), python3-fasteners, python3-git (>= 2.1.6~), python3-humanize, python3-iso8601, python3-keyrings.alt | python3-keyring (<= 8), python3-secretstorage, python3-keyring, python3-mock, python3-msgpack, python3-pil, python3-requests, python3-simplejson, python3-six (>= 1.8.0), python3-tqdm, python3-wrapt, python3-boto, python3-chardet, python3:any Recommends: python3-exif, python3-github, python3-jsmin, python3-html5lib, python3-httpretty, python3-libxmp, python3-lzma, python3-mutagen, python3-nose, python3-pyperclip, python3-requests-ftp, python3-vcr, python3-whoosh Suggests: python3-duecredit, python3-bs4, python3-numpy, datalad-containers, datalad-crawler, datalad-neuroimaging Homepage: http://datalad.org Priority: optional Section: python Filename: pool/main/d/datalad/python3-datalad_0.11.8-1~nd110+1_all.deb Size: 950208 SHA256: 5fb4ffa2870104b6c8b1c28fa7326f249d031f584601a64de9e7a2c406cf8adb SHA1: b3bf1b1158420775bc3b8a20b83f5f63da63834d MD5sum: 541528ee6f7510582994877349520cf5 Description: data files management and distribution platform DataLad is a data management and distribution platform providing access to a wide range of data resources already available online. Using git-annex as its backend for data logistics it provides following facilities built-in or available through additional extensions . - command line and Python interfaces for manipulation of collections of datasets (install, uninstall, update, publish, save, etc.) and separate files/directories (add, get) - extract, aggregate, and search through various sources of metadata (xmp, EXIF, etc; install datalad-neuroimaging for DICOM, BIDS, NIfTI support) - crawl web sites to automatically prepare and update git-annex repositories with content from online websites, S3, etc (install datalad-crawler) . This package installs the module for Python 3, and Recommends install all dependencies necessary for searching and managing datasets, publishing, and testing. If you need base functionality, install without Recommends. Package: python3-diskcache Source: diskcache Version: 4.0.0-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 209 Depends: neurodebian-popularity-contest, python3:any Homepage: http://www.grantjenks.com/docs/diskcache/ Priority: optional Section: python Filename: pool/main/d/diskcache/python3-diskcache_4.0.0-1~nd110+1_all.deb Size: 33652 SHA256: 4064bff48742469ce85a20859ec0e3fa9a2220c83fa7458356ca03543743e37d SHA1: 11acb0ba5f0c5588d333a90ad131485016397e58 MD5sum: 496229e62a516f908815a054921c14ae Description: Python module for Disk and file backed persistent cache DiskCache is an Apache2 licensed disk and file backed cache library, written in pure-Python. Its features include . - Django compatible API - Thread-safe and process-safe - Supports multiple eviction policies (LRU and LFU included) - Keys support “tag” metadata and eviction Package: python3-hdmf Source: hdmf Version: 1.1.2-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 392 Depends: neurodebian-popularity-contest, python3-dateutil, python3-h5py, python3-numpy, python3-pandas, python3-requests, python3-ruamel.yaml, python3-six, python3:any, python3-certifi, python3-chardet, python3-idna, python3-urllib3 Homepage: https://github.com/hdmf-dev/hdmf Priority: optional Section: python Filename: pool/main/h/hdmf/python3-hdmf_1.1.2-1~nd110+1_all.deb Size: 63672 SHA256: ae1c5f98e5e75b469c43f879721ab57561b69b14086575b455bebafff545caf4 SHA1: b0629cd131b4672d0f7c2d072f9e7215a462ca62 MD5sum: 64e5974e6b2358f9b349259f637437e5 Description: Hierarchical Data Modeling Framework The Hierarchical Data Modeling Framework (HDMF) is a Python package for working with hierarchical data. It provides APIs for specifying data models, reading and writing data to different storage backends, and representing data with Python object. Package: python3-neo Source: neo Version: 0.7.2-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 3485 Depends: neurodebian-popularity-contest, python3-numpy, python3-quantities, python3:any Recommends: python3-scipy (>= 0.8~), python3-tables (>= 2.2~), libjs-jquery, libjs-underscore Suggests: python3-nose Homepage: http://neuralensemble.org/trac/neo Priority: optional Section: python Filename: pool/main/n/neo/python3-neo_0.7.2-1~nd110+1_all.deb Size: 1309360 SHA256: a648f225bf07f9678c0d5a16f333d1bf2a7dddda7b5b0906a0ffe4929cee3bd7 SHA1: 44734afa69009303db86e70925e6f9cc8cc0daad MD5sum: 66958ad49e2f13d1d97955f8f1ec887e Description: Python IO library for electrophysiological data formats NEO stands for Neural Ensemble Objects and is a project to provide common classes and concepts for dealing with electro-physiological (in vivo and/or simulated) data to facilitate collaborative software/algorithm development. In particular Neo provides: a set a classes for data representation with precise definitions, an IO module with a simple API, documentation, and a set of examples. . NEO offers support for reading data from numerous proprietary file formats (e.g. Spike2, Plexon, AlphaOmega, BlackRock, Axon), read/write support for various open formats (e.g. KlustaKwik, Elan, WinEdr, WinWcp, PyNN), as well as support common file formats, such as HDF5 with Neo-structured content (NeoHDF5, NeoMatlab). . Neo's IO facilities can be seen as a pure-Python and open-source Neuroshare replacement. Package: python3-nibabel Source: nibabel Version: 2.5.1-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 65839 Depends: neurodebian-popularity-contest, python3-numpy (>= 1.2), python3-six (>= 1.3), python3:any, python3-scipy Recommends: python3-dicom, python3-fuse Suggests: python-nibabel-doc, python3-mock Homepage: http://nipy.sourceforge.net/nibabel Priority: extra Section: python Filename: pool/main/n/nibabel/python3-nibabel_2.5.1-1~nd110+1_all.deb Size: 2662280 SHA256: d6513fa0578b912747d1b6c4878e79e5fcac3a787944338e5e8acf54e91a40bf SHA1: 05339b945660b676d4c9c3f5ccd3b2e5dcd911d8 MD5sum: 0671b3bc9d9fa01722ca81b1e9c4f5ec Description: Python3 bindings to various neuroimaging data formats NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI. Package: python3-pynwb Source: pynwb Version: 1.0.3-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 424 Depends: neurodebian-popularity-contest, python3-chardet, python3-dateutil, python3-h5py (>= 2.7.1), python3-hdmf, python3-numpy, python3-pandas, python3-ruamel.yaml, python3-six, python3:any Homepage: https://github.com/NeurodataWithoutBorders/pynwb Priority: optional Section: python Filename: pool/main/p/pynwb/python3-pynwb_1.0.3-1~nd110+1_all.deb Size: 60480 SHA256: 0bfbc0e279e515a0ce05da671d3f5c2cbebddcc4f26d91f2b5d31c5d6eb55c75 SHA1: c2a15401e2a757cd6d9f802532f7ed53af6df4bf MD5sum: f124f2fbebd81f8c8c69dca1a32a1d95 Description: Python library for working with Neurodata in the NWB format PyNWB is a Python package for working with NWB files. It provides a high-level API for efficiently working with Neurodata stored in the NWB format. . Neurodata Without Borders: Neurophysiology (NWB:N) is a project to develop a unified data format for cellular-based neurophysiology data, focused on the dynamics of groups of neurons measured under a large range of experimental conditions. Package: python3-quantities Source: python-quantities Version: 0.12.3-1~nd110+1 Architecture: all Maintainer: NeuroDebian Maintainers Installed-Size: 354 Depends: neurodebian-popularity-contest, python3-numpy, python3:any Suggests: python3-unittest2 Homepage: http://packages.python.org/quantities/ Priority: optional Section: python Filename: pool/main/p/python-quantities/python3-quantities_0.12.3-1~nd110+1_all.deb Size: 57624 SHA256: 04af7004229d545ef71e61da555608447eb34882c890c120be6c0877321cad03 SHA1: e2461fd99e38f6dddbc79963a0844cecd49e3e35 MD5sum: 3d4cee6b7093dac06d5a3e2cee06a000 Description: Library for computation of physical quantities with units, based on numpy Quantities is designed to handle arithmetic and conversions of physical quantities, which have a magnitude, dimensionality specified by various units, and possibly an uncertainty. Quantities builds on the popular numpy library and is designed to work with numpy ufuncs, many of which are already supported.