| nibabel | Read / write access to some common neuroimaging file formats |
| analyze | Read / write access to the basic Mayo Analyze format |
| spm2analyze | Read / write access to SPM2 version of analyze image format |
| spm99analyze | Read / write access to SPM99 version of analyze image format |
| gifti | GIfTI format IO |
| freesurfer | Reading functions for freesurfer files |
| minc1 | Read MINC1 format images |
| minc2 | Preliminary MINC2 support |
| nicom | DICOM reader |
| nifti1 | Read / write access to NIfTI1 image format |
| nifti2 | Read / write access to NIfTI2 image format |
| ecat | Read ECAT format images |
| parrec | Read images in PAR/REC format. |
| streamlines | Multiformat-capable streamline format read / write interface |
| trackvis | Read and write trackvis files (old interface) |
| eulerangles | Module implementing Euler angle rotations and their conversions |
| funcs | Processor functions for images |
| imageclasses | Define supported image classes and names |
| imageglobals | Defaults for images and headers |
| loadsave | Utilities to load and save image objects |
| orientations | Utilities for calculating and applying affine orientations |
| quaternions | Functions to operate on, or return, quaternions. |
| spatialimages | A simple spatial image class |
| volumeutils | Utility functions for analyze-like formats |
| arraywriters | Array writer objects |
| casting | Utilties for casting numpy values in various ways |
| data | Utilities to find files from NIPY data packages |
| environment | Settings from the system environment relevant to NIPY |
| arrayproxy | Array proxy base class |
| affines | Utility routines for working with points and affine transforms |
| batteryrunners | Battery runner classes and Report classes |
| data | Utilities to find files from NIPY data packages |
| dft | DICOM filesystem tools |
| fileholders | Fileholder class |
| filename_parser | Create filename pairs, triplets etc, with expected extensions |
| fileslice | Utilities for getting array slices out of file-like objects |
| onetime | Descriptor support for NIPY. |
| openers | Context manager openers for various fileobject types |
| optpkg | Routines to support optional packages |
| rstutils | ReStructured Text utilities |
| tmpdirs | Contexts for with statement providing temporary directories |
| tripwire | Class to raise error for missing modules or other misfortunes |
| wrapstruct | Class to wrap numpy structured array |
