nipype.algorithms.stats module¶
Managing statistical maps
ActivationCount¶
Bases: SimpleInterface
Calculate a simple Activation Count Maps
Adapted from: https://github.com/poldracklab/CNP_task_analysis/ blob/61c27f5992db9d8800884f8ffceb73e6957db8af/CNP_2nd_level_ACM.py
- in_files : a list of items which are a pathlike object or string representing an existing file
- Input file, generally a list of z-stat maps.
- threshold : a float
- Binarization threshold. E.g. a threshold of 1.65 corresponds to a two-sided Z-test of p<.10.
- acm_neg : a pathlike object or string representing an existing file
- Negative activation count map.
- acm_pos : a pathlike object or string representing an existing file
- Positive activation count map.
- out_file : a pathlike object or string representing an existing file
- Output activation count map.