nipype.interfaces.dipy.anisotropic_power module

APMQball

Link to code

Bases: DipyDiffusionInterface

Calculates the anisotropic power map

Example

>>> import nipype.interfaces.dipy as dipy
>>> apm = dipy.APMQball()
>>> apm.inputs.in_file = 'diffusion.nii'
>>> apm.inputs.in_bvec = 'bvecs'
>>> apm.inputs.in_bval = 'bvals'
>>> apm.run()                                   # doctest: +SKIP

in_bval : a pathlike object or string representing an existing file

Input b-values table.

in_bvec : a pathlike object or string representing an existing file

Input b-vectors table.

in_file : a pathlike object or string representing an existing file

Input diffusion data.

b0_thres : an integer (int or long)

B0 threshold. (Nipype default value: 700)

mask_file : a pathlike object or string representing an existing file

An optional brain mask.

out_prefix : a unicode string

Output prefix for file names.

out_file : a pathlike object or string representing an existing file