nipype.interfaces.slicer.quantification.changequantification module¶
Autogenerated file - DO NOT EDIT If you spot a bug, please report it on the mailing list and/or change the generator.
IntensityDifferenceMetric¶
Bases: SEMLikeCommandLine
Wrapped executable:
IntensityDifferenceMetric.
- title:
- Intensity Difference Change Detection (FAST)
- category:
- Quantification.ChangeQuantification
- description:
- Quantifies the changes between two spatially aligned images based on the pixel-wise difference of image intensities.
version: 0.1
contributor: Andrey Fedorov
acknowledgements:
- args : a unicode string
- Additional parameters to the command. Maps to a command-line argument:
%s.- baselineSegmentationVolume : a pathlike object or string representing an existing file
- Label volume that contains segmentation of the structure of interest in the baseline volume. Maps to a command-line argument:
%s(position: -3).- baselineVolume : a pathlike object or string representing an existing file
- Baseline volume to be compared to. Maps to a command-line argument:
%s(position: -4).- changingBandSize : an integer (int or long)
- How far (in mm) from the boundary of the segmentation should the intensity changes be considered. Maps to a command-line argument:
--changingBandSize %d.- environ : a dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’
- Environment variables. (Nipype default value:
{})- followupVolume : a pathlike object or string representing an existing file
- Followup volume to be compare to the baseline. Maps to a command-line argument:
%s(position: -2).- outputVolume : a boolean or a pathlike object or string representing a file
- Output volume to keep the results of change quantification. Maps to a command-line argument:
%s(position: -1).- reportFileName : a boolean or a pathlike object or string representing a file
- Report file name. Maps to a command-line argument:
--reportFileName %s.- sensitivityThreshold : a float
- This parameter should be between 0 and 1, and defines how sensitive the metric should be to the intensity changes. Maps to a command-line argument:
--sensitivityThreshold %f.
- outputVolume : a pathlike object or string representing an existing file
- Output volume to keep the results of change quantification.
- reportFileName : a pathlike object or string representing an existing file
- Report file name.